RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 TRMUO75648 421 aaKnown RBP4.47□□□□□ -1.69
LINC00550-201ENST00000629293 SLC16A8O95907 504 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 HPRP00739 348 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 RAP2AP10114 183 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 SSTR2P30874 369 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 GDF5P43026 501 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 AVPR1BP47901 424 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 PIK3CGP48736 1102 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 GZMMP51124 257 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 MYBPHQ13203 477 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 PTGR1Q14914 329 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 ZBED5Q49AG3 693 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 LRIF1Q5T3J3 769 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 TTC33Q6PID6 262 aaPredicted RBP4.47□□□□□ -1.69
LINC00550-201ENST00000629293 CALHM3Q86XJ0 350 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 FAM90A1Q86YD7 464 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 ERI1Q8IV48 349 aaKnown RBP4.47□□□□□ -1.69
LINC00550-201ENST00000629293 TRIML2Q8N7C3 387 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 AMER3Q8N944 861 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 OR10Q1Q8NGQ4 319 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 SLC35A4Q96G79 324 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 PEX11GQ96HA9 241 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 FCRL1Q96LA6 429 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 DOK1Q99704 481 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 CHRNA10Q9GZZ6 450 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 FARSBQ9NSD9 589 aaKnown RBP4.47□□□□□ -1.69
LINC00550-201ENST00000629293 WWOXQ9NZC7 414 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 RNF103-CHMP3A0A140T963 221 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 FEZF1A0PJY2 475 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 ARHGEF33A8MVX0 844 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 FAM220BPB1ANY3 271 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 HAT1O14929 419 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 TFECO14948 347 aaPredicted RBP4.46□□□□□ -1.69
LINC00550-201ENST00000629293 ASNA1O43681 348 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 B4GALT2O60909 372 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 SNAP29O95721 258 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 GUCA1CO95843 209 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 MT-ND1P03886 318 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 CATP04040 527 aaKnown RBP4.46□□□□□ -1.69
LINC00550-201ENST00000629293 ALPLP05186 524 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 DBHP09172 617 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 ICAM2P13598 275 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 PTPN6P29350 595 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 CASP2P42575 452 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 SLC6A12P48065 614 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 ALDH3A2P51648 485 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 OLR1P78380 273 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 PCOLCEQ15113 449 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 TTLL9Q3SXZ7 439 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 RUNDC3AQ59EK9 446 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 SPANXN4Q5MJ08 99 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 ZNF324BQ6AW86 544 aaPredicted RBP4.46□□□□□ -1.69
LINC00550-201ENST00000629293 PAPD4Q6PIY7 484 aaKnown RBP4.46□□□□□ -1.69
LINC00550-201ENST00000629293 MBOAT1Q6ZNC8 495 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 LRRC70Q7Z2Q7 622 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 CD163Q86VB7 1156 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 CCDC71Q8IV32 467 aaPredicted RBP4.46□□□□□ -1.69
LINC00550-201ENST00000629293 ZNF786Q8N393 782 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 LIX1Q8N485 282 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 DHRSXQ8N5I4 330 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 FAM86B1Q8N7N1 296 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 NAXEQ8NCW5 288 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 OR9A1PQ8NGU1 263 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 OR51Q1Q8NH59 317 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 MCOLN3Q8TDD5 553 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 SMPDL3AQ92484 453 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 TSLPQ969D9 159 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 RDH12Q96NR8 316 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 CPPED1Q9BRF8 314 aaPredicted RBP4.46□□□□□ -1.69
LINC00550-201ENST00000629293 BDH2Q9BUT1 245 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 NPLQ9BXD5 320 aaPredicted RBP4.46□□□□□ -1.69
LINC00550-201ENST00000629293 ACPTQ9BZG2 426 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 PAIP1Q9H074 479 aaKnown RBP4.46□□□□□ -1.69
LINC00550-201ENST00000629293 LRTM1Q9HBL6 345 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 MKKSQ9NPJ1 570 aaPredicted RBP4.46□□□□□ -1.69
LINC00550-201ENST00000629293 SERHLQ9NQF3 203 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 C14orf105Q9NVL8 296 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 LRFN1Q9P244 771 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 EIF3LQ9Y262 564 aaKnown RBP4.46□□□□□ -1.69
LINC00550-201ENST00000629293 AP3M1Q9Y2T2 418 aa4.46□□□□□ -1.69
LINC00550-201ENST00000629293 ALPK2Q86TB3 2170 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 OR2A25A4D2G3 310 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 NKX2-6A6NCS4 301 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 PRSS29PA6NIE9 313 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 FOXS1O43638 330 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 HS6ST1O60243 411 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 SLCO2B1O94956 709 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 APOL3O95236 402 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 AMY1AP04745 511 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 IL6P05231 212 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 BCKDHAP12694 445 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 PTGER4P35408 488 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 SERPINF1P36955 418 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 HLCSP50747 726 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 EFNA3P52797 238 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 TAS2R50P59544 299 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 HMGCS1Q01581 520 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 NDUFA9Q16795 377 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 CR1LQ2VPA4 569 aa4.46□□□□□ -1.7
LINC00550-201ENST00000629293 FAM174BQ3ZCQ3 159 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms