RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 FBXO34Q9NWN3 711 aa16.94■□□□□ 0.3
SMN2-215ENST00000628696 LAMP3Q9UQV4 416 aa16.94■□□□□ 0.3
SMN2-215ENST00000628696 PTGDR2Q9Y5Y4 395 aa16.94■□□□□ 0.3
SMN2-215ENST00000628696 CHD3Q12873 2000 aaKnown RBP16.93■□□□□ 0.3
SMN2-215ENST00000628696 A0A1W2PPM1 405 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 H3BQF6 201 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 SCDO00767 359 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 KCNK2O95069 426 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 NGFRP08138 427 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 ALOX5P09917 674 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 UROSP10746 265 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 PSMA4P25789 261 aaKnown RBP16.93■□□□□ 0.3
SMN2-215ENST00000628696 AGTR1P30556 359 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 CARD18P57730 90 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 NAA20P61599 178 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 KIAA0040Q15053 153 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 ZNF385BQ569K4 471 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 CLEC6AQ6EIG7 209 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 LILRA2Q8N149 483 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 CCDC63Q8NA47 563 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 OR6Y1Q8NGX8 325 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 RAB3IL1Q8TBN0 382 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 POC1BQ8TC44 478 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 ACTRT2Q8TDY3 377 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 JADE3Q92613 823 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 HOXB13Q92826 284 aaPredicted RBP16.93■□□□□ 0.3
SMN2-215ENST00000628696 ZBED6CLQ96FA7 236 aaPredicted RBP16.93■□□□□ 0.3
SMN2-215ENST00000628696 OTUB1Q96FW1 271 aaPredicted RBP16.93■□□□□ 0.3
SMN2-215ENST00000628696 CHMP6Q96FZ7 201 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 C16orf58Q96GQ5 468 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 REXO5Q96IC2 774 aaKnown RBP16.93■□□□□ 0.3
SMN2-215ENST00000628696 TSSK3Q96PN8 268 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 KLHDC3Q9BQ90 382 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 TMEM204Q9BSN7 226 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 REEP4Q9H6H4 257 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 UBQLN4Q9NRR5 601 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 C1orf109Q9NX04 203 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 FIS1Q9Y3D6 152 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 CCL27Q9Y4X3 112 aa16.93■□□□□ 0.3
SMN2-215ENST00000628696 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.92■□□□□ 0.3
SMN2-215ENST00000628696 C7orf72A4D263 438 aa16.92■□□□□ 0.3
SMN2-215ENST00000628696 SLC28A1O00337 649 aa16.92■□□□□ 0.3
SMN2-215ENST00000628696 CLOCKO15516 846 aa16.92■□□□□ 0.3
SMN2-215ENST00000628696 RGS14O43566 566 aa16.92■□□□□ 0.3
SMN2-215ENST00000628696 GLRA3O75311 464 aa16.92■□□□□ 0.3
SMN2-215ENST00000628696 PROCP04070 461 aa16.92■□□□□ 0.3
SMN2-215ENST00000628696 EFNA1P20827 205 aaPredicted RBP16.92■□□□□ 0.3
SMN2-215ENST00000628696 ZNF844Q08AG5 666 aa16.92■□□□□ 0.3
SMN2-215ENST00000628696 TSC22D1Q15714 1073 aa16.92■□□□□ 0.3
SMN2-215ENST00000628696 DUSP5Q16690 384 aa16.92■□□□□ 0.3
SMN2-215ENST00000628696 TMEM201Q5SNT2 666 aa16.92■□□□□ 0.3
SMN2-215ENST00000628696 CCNJQ5T5M9 372 aa16.92■□□□□ 0.3
SMN2-215ENST00000628696 COX18Q8N8Q8 333 aa16.92■□□□□ 0.3
SMN2-215ENST00000628696 MAPK1IP1LQ8NDC0 245 aa16.92■□□□□ 0.3
SMN2-215ENST00000628696 STEAP2Q8NFT2 490 aa16.92■□□□□ 0.3
SMN2-215ENST00000628696 CLHC1Q8NHS4 586 aa16.92■□□□□ 0.3
SMN2-215ENST00000628696 B4GALNT2Q8NHY0 566 aa16.92■□□□□ 0.3
SMN2-215ENST00000628696 FAM110BQ8TC76 370 aa16.92■□□□□ 0.3
SMN2-215ENST00000628696 MZB1Q8WU39 189 aa16.92■□□□□ 0.3
SMN2-215ENST00000628696 S100PBPQ96BU1 408 aa16.92■□□□□ 0.3
SMN2-215ENST00000628696 GIMAP5Q96F15 307 aa16.92■□□□□ 0.3
SMN2-215ENST00000628696 METTL2AQ96IZ6 378 aaKnown RBP16.92■□□□□ 0.3
SMN2-215ENST00000628696 KLHL15Q96M94 604 aa16.92■□□□□ 0.3
SMN2-215ENST00000628696 MS4A4EQ96PG1 132 aa16.92■□□□□ 0.3
SMN2-215ENST00000628696 BAIAP2L1Q9UHR4 511 aa16.92■□□□□ 0.3
SMN2-215ENST00000628696 ADAM21Q9UKJ8 722 aa16.92■□□□□ 0.3
SMN2-215ENST00000628696 TMCC2O75069 709 aa16.91■□□□□ 0.3
SMN2-215ENST00000628696 NTN1O95631 604 aa16.91■□□□□ 0.3
SMN2-215ENST00000628696 PABPC4LP0CB38 370 aaKnown RBP16.91■□□□□ 0.3
SMN2-215ENST00000628696 PSMB1P20618 241 aaKnown RBP16.91■□□□□ 0.3
SMN2-215ENST00000628696 PRPH2P23942 346 aa16.91■□□□□ 0.3
SMN2-215ENST00000628696 SHC1P29353 583 aa16.91■□□□□ 0.3
SMN2-215ENST00000628696 SERPINB4P48594 390 aa16.91■□□□□ 0.3
SMN2-215ENST00000628696 DNAJB13P59910 316 aa16.91■□□□□ 0.3
SMN2-215ENST00000628696 RPS4XP62701 263 aaKnown RBP16.91■□□□□ 0.3
SMN2-215ENST00000628696 VEZF1Q14119 521 aa16.91■□□□□ 0.3
SMN2-215ENST00000628696 CAPRIN1Q14444 709 aaKnown RBP16.91■□□□□ 0.3
SMN2-215ENST00000628696 TRABD2AQ86V40 505 aa16.91■□□□□ 0.3
SMN2-215ENST00000628696 MISPQ8IVT2 679 aa16.91■□□□□ 0.3
SMN2-215ENST00000628696 IFT20Q8IY31 132 aa16.91■□□□□ 0.3
SMN2-215ENST00000628696 PIAS4Q8N2W9 510 aaPredicted RBP16.91■□□□□ 0.3
SMN2-215ENST00000628696 ABHD3Q8WU67 409 aa16.91■□□□□ 0.3
SMN2-215ENST00000628696 HDHD5Q9BXW7 423 aa16.91■□□□□ 0.3
SMN2-215ENST00000628696 OR10A4Q9H209 315 aa16.91■□□□□ 0.3
SMN2-215ENST00000628696 TIGARQ9NQ88 270 aa16.91■□□□□ 0.3
SMN2-215ENST00000628696 NUP214P35658 2090 aaPredicted RBP16.91■□□□□ 0.3
SMN2-215ENST00000628696 SONP18583 2426 aaKnown RBP16.91■□□□□ 0.3
SMN2-215ENST00000628696 RNF223E7ERA6 249 aa16.9■□□□□ 0.3
SMN2-215ENST00000628696 NUDT14O95848 222 aa16.9■□□□□ 0.3
SMN2-215ENST00000628696 SDC1P18827 310 aa16.9■□□□□ 0.3
SMN2-215ENST00000628696 IL32P24001 234 aa16.9■□□□□ 0.3
SMN2-215ENST00000628696 PRIM2P49643 509 aa16.9■□□□□ 0.3
SMN2-215ENST00000628696 RNF144AP50876 292 aaPredicted RBP16.9■□□□□ 0.3
SMN2-215ENST00000628696 CD226Q15762 336 aa16.9■□□□□ 0.3
SMN2-215ENST00000628696 CLEC12BQ2HXU8 276 aa16.9■□□□□ 0.3
SMN2-215ENST00000628696 CCDC153Q494R4 210 aa16.9■□□□□ 0.3
SMN2-215ENST00000628696 NUFIP2Q7Z417 695 aaKnown RBP16.9■□□□□ 0.3
SMN2-215ENST00000628696 TUSC5Q8IXB3 177 aa16.9■□□□□ 0.3
SMN2-215ENST00000628696 ZNF619Q8N2I2 560 aa16.9■□□□□ 0.3
SMN2-215ENST00000628696 ATP6V1C2Q8NEY4 427 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms