RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 NDRG3Q9UGV2 375 aa12.11□□□□□ -0.47
SOX2-OT-241ENST00000626948 DSCAMO60469 2012 aa12.11□□□□□ -0.47
SOX2-OT-241ENST00000626948 TLDC2A0PJX2 215 aa12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 C7orf72A4D263 438 aa12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 C16orf97H3BN30 126 aa12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 SCAMP2O15127 329 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 NDUFB5O43674 189 aa12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 CXCL13O43927 109 aa12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 NPHS1O60500 1241 aa12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 SS18L1O75177 396 aaPredicted RBP12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 HMGN2P05204 90 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 NEFHP12036 1026 aa12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 ZNF17P17021 662 aa12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 EIF1AXP47813 144 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 PSMD4P55036 377 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 EEFSECP57772 596 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 NKX6-1P78426 367 aaPredicted RBP12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 ZNF117Q03924 483 aa12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 MLC1Q15049 377 aa12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 TOMM34Q15785 309 aaPredicted RBP12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 NDUFAF6Q330K2 333 aa12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 STAC2Q6ZMT1 411 aa12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 CHMP1BQ7LBR1 199 aa12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 RIMKLAQ8IXN7 391 aa12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 CEP70Q8NHQ1 597 aa12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 PSMA8Q8TAA3 256 aa12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 CDS1Q92903 461 aa12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 TRMOQ9BU70 441 aa12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 SERHL2Q9H4I8 314 aa12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 PPCSQ9HAB8 311 aa12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 C3orf14Q9HBI5 128 aa12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 BEX4Q9NWD9 120 aaPredicted RBP12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 ELOVL5Q9NYP7 299 aa12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 ZDHHC2Q9UIJ5 367 aa12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 MRTO4Q9UKD2 239 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-241ENST00000626948 A0A1W2PQD3 144 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 NPIPB9F8W1W9 429 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 TNFSF11O14788 317 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 CASKO14936 926 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 PEX11AO75192 247 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 NTN1O95631 604 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 PLAUP00749 431 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 NUDT17P0C025 328 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 CLK3P49761 638 aaKnown RBP12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 VSNL1P62760 191 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 RAC1P63000 192 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 LASP1Q14847 261 aaKnown RBP12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 C6orf136Q5SQH8 315 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 CPTPQ5TA50 214 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 OLIG3Q7RTU3 272 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 SZRD1Q7Z422 152 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 DDIASQ8IXT1 998 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 CNPY4Q8N129 248 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 ZFP28Q8NHY6 868 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 TCP10LQ8TDR4 215 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 ACTRT2Q8TDY3 377 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 MTERF3Q96E29 417 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 ARSGQ96EG1 525 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 DTNBP1Q96EV8 351 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 C18orf12Q96KH6 178 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 MED18Q9BUE0 208 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 C1orf50Q9BV19 199 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 SRXN1Q9BYN0 137 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 ZNF395Q9H8N7 513 aaPredicted RBP12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 NEUROD4Q9HD90 331 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 ZCCHC3Q9NUD5 404 aaKnown RBP12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 GIN1Q9NXP7 522 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 LGALS13Q9UHV8 139 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 KCNE5Q9UJ90 142 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 ICAM5Q9UMF0 924 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 PROCRQ9UNN8 238 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 EIF3LQ9Y262 564 aaKnown RBP12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 TMED5Q9Y3A6 229 aa12.09□□□□□ -0.47
SOX2-OT-241ENST00000626948 CENPVL1A0A0U1RR11 272 aa12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 ESPNB1AK53 854 aa12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 SLU7O95391 586 aaKnown RBP12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 C6orf47O95873 294 aa12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 C1QCP02747 245 aa12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 ALOX5P09917 674 aa12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 ETV4P43268 484 aa12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 RPS3AP61247 264 aaKnown RBP12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 ZNF844Q08AG5 666 aa12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 FOXF1Q12946 379 aa12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 ACKR1Q16570 336 aa12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 SGCBQ16585 318 aa12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 EXOC3L2Q2M3D2 409 aa12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 VPS26BQ4G0F5 336 aa12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 KLHL26Q53HC5 615 aa12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 ZCCHC12Q6PEW1 402 aa12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 CLEC4FQ8N1N0 589 aa12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 COX18Q8N8Q8 333 aa12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 OR6K3Q8NGY3 331 aa12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 OR2V1Q8NHB1 315 aa12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 ROBO4Q8WZ75 1007 aa12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 COQ8BQ96D53 544 aa12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 GMPPAQ96IJ6 420 aaPredicted RBP12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 BTBD2Q9BX70 525 aa12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 KLHL4Q9C0H6 718 aa12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 PIGUQ9H490 435 aa12.08□□□□□ -0.48
SOX2-OT-241ENST00000626948 COQ10BQ9H8M1 238 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms