RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 A0A1W2PQ45 241 aaPredicted RBP13.16□□□□□ -0.3
LDB3-209ENST00000623056 A0A1W2PQY0 241 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 PLSCR5A0PG75 271 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 DAPL1A0PJW8 107 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 KRBOX1C9JBD0 128 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 PGRMC2O15173 223 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 HYAL3O43820 417 aaPredicted RBP13.16□□□□□ -0.3
LDB3-209ENST00000623056 OLFM2O95897 454 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 TGM6O95932 706 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 NMBP08949 121 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 RAB3BP20337 219 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 TPMTP51580 245 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 STXBP1P61764 594 aaKnown RBP13.16□□□□□ -0.3
LDB3-209ENST00000623056 DHODHQ02127 395 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 LHX8Q68G74 356 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 SFRP4Q6FHJ7 346 aaPredicted RBP13.16□□□□□ -0.3
LDB3-209ENST00000623056 NRMQ8IXM6 262 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 ANKRD53Q8N9V6 530 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 C17orf47Q8NEP4 570 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 OR11G2Q8NGC1 345 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 MARC2Q969Z3 335 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 AMDHD1Q96NU7 426 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 VN1R3Q9BXE9 311 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 WDR26Q9H7D7 661 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 AUNIPQ9H7T9 357 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 ZNF275Q9NSD4 429 aaPredicted RBP13.16□□□□□ -0.3
LDB3-209ENST00000623056 PRKAG2Q9UGJ0 569 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 SLC25A13Q9UJS0 675 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 NTNG1Q9Y2I2 539 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 MKI67P46013 3256 aaKnown RBP13.16□□□□□ -0.3
LDB3-209ENST00000623056 A0A0G2JPF8 293 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 A8MXK9 166 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 HNRNPCL2B2RXH8 293 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 HNRNPCL3B7ZW38 293 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 L7N2F9 121 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 KLF4O43474 513 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 PLPP2O43688 288 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 PI15O43692 258 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 PIP5K1CO60331 668 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 ABLIM3O94929 683 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 FGBP02675 491 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 HMGN1P05114 100 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 HNRNPCL4P0DMR1 293 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 GDNFP39905 211 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 VEGFCP49767 419 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 CCR8P51685 355 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 RPS7P62081 194 aaKnown RBP13.15□□□□□ -0.3
LDB3-209ENST00000623056 ZNF311Q5JNZ3 666 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 NDUFAF5Q5TEU4 345 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 NIPAL3Q6P499 406 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 LSRQ86X29 649 aaPredicted RBP13.15□□□□□ -0.3
LDB3-209ENST00000623056 GID4Q8IVV7 300 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 IZUMO1Q8IYV9 350 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 OR10H4Q8NGA5 316 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 OR2A12Q8NGT7 310 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 SETD7Q8WTS6 366 aaKnown RBP13.15□□□□□ -0.3
LDB3-209ENST00000623056 SORCS1Q8WY21 1168 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 PTP4A1Q93096 173 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 SAMD8Q96LT4 415 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 ARHGDIGQ99819 225 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 LDAHQ9H6V9 325 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 ELAC1Q9H777 363 aaKnown RBP13.15□□□□□ -0.3
LDB3-209ENST00000623056 CD93Q9NPY3 652 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 MRPL15Q9P015 296 aaKnown RBP13.15□□□□□ -0.3
LDB3-209ENST00000623056 PIPOXQ9P0Z9 390 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 NFKBIL1Q9UBC1 381 aaPredicted RBP13.15□□□□□ -0.3
LDB3-209ENST00000623056 ING1Q9UK53 422 aaPredicted RBP13.15□□□□□ -0.3
LDB3-209ENST00000623056 ACSL5Q9ULC5 683 aa13.15□□□□□ -0.3
LDB3-209ENST00000623056 POM121CA8CG34 1229 aa13.14□□□□□ -0.31
LDB3-209ENST00000623056 LGALS8O00214 317 aa13.14□□□□□ -0.31
LDB3-209ENST00000623056 GSTZ1O43708 216 aaPredicted RBP13.14□□□□□ -0.31
LDB3-209ENST00000623056 GMDSO60547 372 aa13.14□□□□□ -0.31
LDB3-209ENST00000623056 LPLP06858 475 aa13.14□□□□□ -0.31
LDB3-209ENST00000623056 ATF1P18846 271 aa13.14□□□□□ -0.31
LDB3-209ENST00000623056 CD53P19397 219 aa13.14□□□□□ -0.31
LDB3-209ENST00000623056 GCGRP47871 477 aa13.14□□□□□ -0.31
LDB3-209ENST00000623056 LASP1Q14847 261 aaKnown RBP13.14□□□□□ -0.31
LDB3-209ENST00000623056 MLC1Q15049 377 aa13.14□□□□□ -0.31
LDB3-209ENST00000623056 TPGS2Q68CL5 300 aa13.14□□□□□ -0.31
LDB3-209ENST00000623056 MEPCEQ7L2J0 689 aaKnown RBP13.14□□□□□ -0.31
LDB3-209ENST00000623056 TRMT11Q7Z4G4 463 aaKnown RBP13.14□□□□□ -0.31
LDB3-209ENST00000623056 VRK2Q86Y07 508 aa13.14□□□□□ -0.31
LDB3-209ENST00000623056 GJD3Q8N144 294 aa13.14□□□□□ -0.31
LDB3-209ENST00000623056 ACOT11Q8WXI4 607 aaPredicted RBP13.14□□□□□ -0.31
LDB3-209ENST00000623056 MYLIPQ8WY64 445 aa13.14□□□□□ -0.31
LDB3-209ENST00000623056 LCORQ96JN0 433 aaPredicted RBP13.14□□□□□ -0.31
LDB3-209ENST00000623056 SMAD5Q99717 465 aaKnown RBP13.14□□□□□ -0.31
LDB3-209ENST00000623056 DPYSL5Q9BPU6 564 aa13.14□□□□□ -0.31
LDB3-209ENST00000623056 RHBGQ9H310 441 aa13.14□□□□□ -0.31
LDB3-209ENST00000623056 NPDC1Q9NQX5 325 aaPredicted RBP13.14□□□□□ -0.31
LDB3-209ENST00000623056 STARD7Q9NQZ5 370 aa13.14□□□□□ -0.31
LDB3-209ENST00000623056 GLS2Q9UI32 602 aa13.14□□□□□ -0.31
LDB3-209ENST00000623056 SLC13A4Q9UKG4 626 aa13.14□□□□□ -0.31
LDB3-209ENST00000623056 LRFN2Q9ULH4 789 aa13.14□□□□□ -0.31
LDB3-209ENST00000623056 CAMK2AQ9UQM7 478 aa13.14□□□□□ -0.31
LDB3-209ENST00000623056 NPFFR2Q9Y5X5 522 aa13.14□□□□□ -0.31
LDB3-209ENST00000623056 KCNE3Q9Y6H6 103 aa13.14□□□□□ -0.31
LDB3-209ENST00000623056 SYT5O00445 386 aa13.14□□□□□ -0.31
LDB3-209ENST00000623056 SC5DO75845 299 aa13.14□□□□□ -0.31
LDB3-209ENST00000623056 MT-ND5P03915 603 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms