RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 A0A0J9YY10 115 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 LRRTM2O43300 516 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 BRINP1O60477 761 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 SLC2A10O95528 541 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 HLA-DPB1P04440 258 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 AKT2P31751 481 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 CTBP2P56545 445 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 ILF3Q12906 894 aaKnown RBP eCLIP8.75□□□□□ -1.01
PDPN-212ENST00000621990 OR1Q1Q15612 314 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 KCNJ8Q15842 424 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 ARMC4Q5T2S8 1044 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 GARNL3Q5VVW2 1013 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 NIPAL3Q6P499 406 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 TMEM92Q6UXU6 159 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 SLC22A18ASQ8N1D0 253 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 CA13Q8N1Q1 262 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 SIRT6Q8N6T7 355 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 TMEM239Q8WW34 195 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 TIMP4Q99727 224 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 OR52D1Q9H346 318 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 SYNDIG1Q9H7V2 258 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 ITGB1BP2Q9UKP3 347 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 CSNK1G3Q9Y6M4 447 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 A0A1W2PQ09 198 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 ZNF860A6NHJ4 632 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 PEX12O00623 359 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 LDB3O75112 727 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 SOX30O94993 753 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 EIF2S1P05198 315 aaKnown RBP8.75□□□□□ -1.01
PDPN-212ENST00000621990 MAKP20794 623 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 HTR3AP46098 478 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 DLX2Q07687 328 aaPredicted RBP8.75□□□□□ -1.01
PDPN-212ENST00000621990 ZNF613Q6PF04 617 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 KIAA1324Q6UXG2 1013 aaKnown RBP8.75□□□□□ -1.01
PDPN-212ENST00000621990 Q6ZSR6 202 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 SPATC1Q76KD6 591 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 CXXC5Q7LFL8 322 aaKnown RBP8.75□□□□□ -1.01
PDPN-212ENST00000621990 CPOQ8IVL8 374 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 TRIM48Q8IWZ4 208 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 SHISA5Q8N114 240 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 FANK1Q8TC84 345 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 KISS1RQ969F8 398 aaPredicted RBP8.75□□□□□ -1.01
PDPN-212ENST00000621990 ANKRD9Q96BM1 317 aaPredicted RBP8.75□□□□□ -1.01
PDPN-212ENST00000621990 HS6ST2Q96MM7 605 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 DCLRE1CQ96SD1 692 aaKnown RBP8.75□□□□□ -1.01
PDPN-212ENST00000621990 CD180Q99467 661 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 ADAP2Q9NPF8 381 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 GPR27Q9NS67 375 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 C20orf141Q9NUB4 165 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 C14orf105Q9NVL8 296 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 FBXO34Q9NWN3 711 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 CLDND1Q9NY35 253 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 CLCA2Q9UQC9 943 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 TMEM5Q9Y2B1 443 aa8.75□□□□□ -1.01
PDPN-212ENST00000621990 KIR2DS5A0A0G2JLQ3 304 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 A0A0G2JNG1 304 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 KIR2DS3K7RE56 304 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 SOCS6O14544 535 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 POLR1CO15160 346 aaPredicted RBP8.74□□□□□ -1.01
PDPN-212ENST00000621990 NKX2-2O95096 273 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 HLA-DQB1P01920 261 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 CSF3P09919 207 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 DRD5P21918 477 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 CFL1P23528 166 aaKnown RBP8.74□□□□□ -1.01
PDPN-212ENST00000621990 RABIFP47224 123 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 PPP3R1P63098 170 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 ID2Q02363 134 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 TFF2Q03403 129 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 SCN1BQ07699 218 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 KIR2DS5Q14953 304 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 MEPCEQ7L2J0 689 aaKnown RBP8.74□□□□□ -1.01
PDPN-212ENST00000621990 C11orf74Q86VG3 221 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 COX18Q8N8Q8 333 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 OR5T3Q8NGG3 340 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 SECISBP2Q96T21 854 aaKnown RBP8.74□□□□□ -1.01
PDPN-212ENST00000621990 ZNF426Q9BUY5 554 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 DPH1Q9BZG8 443 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 HOXD1Q9GZZ0 328 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 TNFRSF10DQ9UBN6 386 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 IL20RAQ9UHF4 553 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 PIAS3Q9Y6X2 628 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 FABP12A6NFH5 140 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 CT62P0C5K7 136 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 GKN3PP0CG01 181 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 SLC35E2P0CK97 266 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 PVRP15151 417 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 NT5EP21589 574 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 PTBP1P26599 531 aaKnown RBP eCLIP8.74□□□□□ -1.01
PDPN-212ENST00000621990 RNF144AP50876 292 aaPredicted RBP8.74□□□□□ -1.01
PDPN-212ENST00000621990 OR2B6P58173 313 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 SHC2P98077 582 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 RIN1Q13671 783 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 METAP1DQ6UB28 335 aaPredicted RBP8.74□□□□□ -1.01
PDPN-212ENST00000621990 FAM131AQ6UXB0 335 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 GRAMD2AQ8IUY3 354 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 TMEFF1Q8IYR6 380 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 CSNK1A1LQ8N752 337 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 OR52L1Q8NGH7 329 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 PFN4Q8NHR9 129 aa8.74□□□□□ -1.01
PDPN-212ENST00000621990 SPRYD4Q8WW59 207 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms