RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 ZAR1LA6NP61 321 aa19.78■□□□□ 0.76
SPAST-204ENST00000621856 NTN1O95631 604 aa19.78■□□□□ 0.76
SPAST-204ENST00000621856 KLK3P07288 261 aaPredicted RBP19.78■□□□□ 0.76
SPAST-204ENST00000621856 CCDC159P0C7I6 412 aa19.78■□□□□ 0.76
SPAST-204ENST00000621856 GSTM3P21266 225 aa19.78■□□□□ 0.76
SPAST-204ENST00000621856 SLC5A2P31639 672 aa19.78■□□□□ 0.76
SPAST-204ENST00000621856 CCKBRP32239 447 aa19.78■□□□□ 0.76
SPAST-204ENST00000621856 NR0B1P51843 470 aaKnown RBP19.78■□□□□ 0.76
SPAST-204ENST00000621856 CDC42P60953 191 aa19.78■□□□□ 0.76
SPAST-204ENST00000621856 ILKQ13418 452 aa19.78■□□□□ 0.76
SPAST-204ENST00000621856 ZNF773Q6PK81 442 aa19.78■□□□□ 0.76
SPAST-204ENST00000621856 PRR22Q8IZ63 422 aa19.78■□□□□ 0.76
SPAST-204ENST00000621856 TMEM255BQ8WV15 326 aa19.78■□□□□ 0.76
SPAST-204ENST00000621856 ZNF566Q969W8 418 aa19.78■□□□□ 0.76
SPAST-204ENST00000621856 SCN3BQ9NY72 215 aa19.78■□□□□ 0.76
SPAST-204ENST00000621856 CNOT3O75175 753 aaKnown RBP19.77■□□□□ 0.76
SPAST-204ENST00000621856 HPGDP15428 266 aa19.77■□□□□ 0.76
SPAST-204ENST00000621856 KRT20P35900 424 aa19.77■□□□□ 0.76
SPAST-204ENST00000621856 NUBP1P53384 320 aa19.77■□□□□ 0.76
SPAST-204ENST00000621856 ALDH6A1Q02252 535 aaKnown RBP19.77■□□□□ 0.76
SPAST-204ENST00000621856 BROXQ5VW32 411 aa19.77■□□□□ 0.76
SPAST-204ENST00000621856 FOXB2Q5VYV0 432 aa19.77■□□□□ 0.76
SPAST-204ENST00000621856 CD300LDQ6UXZ3 194 aa19.77■□□□□ 0.76
SPAST-204ENST00000621856 ZNF550Q7Z398 422 aa19.77■□□□□ 0.76
SPAST-204ENST00000621856 MEX3DQ86XN8 651 aaKnown RBP19.77■□□□□ 0.76
SPAST-204ENST00000621856 ZNF527Q8NB42 609 aa19.77■□□□□ 0.76
SPAST-204ENST00000621856 ARSGQ96EG1 525 aa19.77■□□□□ 0.76
SPAST-204ENST00000621856 SPSB2Q99619 263 aa19.77■□□□□ 0.76
SPAST-204ENST00000621856 CMKLR1Q99788 373 aa19.77■□□□□ 0.76
SPAST-204ENST00000621856 ULBP3Q9BZM4 244 aa19.77■□□□□ 0.76
SPAST-204ENST00000621856 SLC26A1Q9H2B4 701 aa19.77■□□□□ 0.76
SPAST-204ENST00000621856 C11orf16Q9NQ32 467 aa19.77■□□□□ 0.76
SPAST-204ENST00000621856 TMEM9BQ9NQ34 198 aa19.77■□□□□ 0.76
SPAST-204ENST00000621856 UBQLN4Q9NRR5 601 aa19.77■□□□□ 0.76
SPAST-204ENST00000621856 COL27A1Q8IZC6 1860 aaPredicted RBP19.77■□□□□ 0.76
SPAST-204ENST00000621856 SAGE2PA6NJ88 616 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 XPNPEP2O43895 674 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 FAM20BO75063 409 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 REM1O75628 298 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 UTS2O95399 124 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 CSTAP01040 98 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 IGFBP1P08833 259 aaPredicted RBP19.76■□□□□ 0.75
SPAST-204ENST00000621856 IL12BP29460 328 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 MBOAT2Q6ZWT7 520 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 P3H2Q8IVL5 708 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 MR1Q95460 341 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 SLC35B4Q969S0 331 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 FAM46AQ96IP4 442 aaKnown RBP19.76■□□□□ 0.75
SPAST-204ENST00000621856 GPA33Q99795 319 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 KRCC1Q9NPI7 259 aaPredicted RBP19.76■□□□□ 0.75
SPAST-204ENST00000621856 FLRT3Q9NZU0 649 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 NDUFA13Q9P0J0 144 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 TPRKBQ9Y3C4 175 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 GPR179Q6PRD1 2367 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 SMIM31A0A1B0GVY4 71 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 CDC14CA4D256 554 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 B4E171 279 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 PTGES3LE9PB15 166 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 TSPAN7P41732 249 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 ALDH3B2P48448 385 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 CXCR4P61073 352 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 SPEM2Q0P670 501 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 KLHL26Q53HC5 615 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 MRPL14Q6P1L8 145 aaKnown RBP19.76■□□□□ 0.75
SPAST-204ENST00000621856 ZNF613Q6PF04 617 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 NRMQ8IXM6 262 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 B3GNT7Q8NFL0 401 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 GRHL3Q8TE85 626 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 APH1BQ8WW43 257 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 PMEPA1Q969W9 287 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 TRIM2Q9C040 744 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 STRADBQ9C0K7 418 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 AKIRIN1Q9H9L7 192 aaPredicted RBP19.76■□□□□ 0.75
SPAST-204ENST00000621856 ZNF226Q9NYT6 803 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 CNIH4Q9P003 139 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 SLC35A3Q9Y2D2 325 aa19.76■□□□□ 0.75
SPAST-204ENST00000621856 SCDO00767 359 aa19.75■□□□□ 0.75
SPAST-204ENST00000621856 PIP5K1CO60331 668 aa19.75■□□□□ 0.75
SPAST-204ENST00000621856 ABCB7O75027 752 aa19.75■□□□□ 0.75
SPAST-204ENST00000621856 WBP4O75554 376 aaKnown RBP19.75■□□□□ 0.75
SPAST-204ENST00000621856 OMPP47874 163 aa19.75■□□□□ 0.75
SPAST-204ENST00000621856 PLCXD2Q0VAA5 305 aa19.75■□□□□ 0.75
SPAST-204ENST00000621856 TSPAN31Q12999 210 aa19.75■□□□□ 0.75
SPAST-204ENST00000621856 NDUFAF6Q330K2 333 aa19.75■□□□□ 0.75
SPAST-204ENST00000621856 PAPD4Q6PIY7 484 aaKnown RBP19.75■□□□□ 0.75
SPAST-204ENST00000621856 KCTD8Q6ZWB6 473 aa19.75■□□□□ 0.75
SPAST-204ENST00000621856 OIT3Q8WWZ8 545 aa19.75■□□□□ 0.75
SPAST-204ENST00000621856 SGCDQ92629 289 aa19.75■□□□□ 0.75
SPAST-204ENST00000621856 ADOQ96SZ5 270 aa19.75■□□□□ 0.75
SPAST-204ENST00000621856 PRSS27Q9BQR3 290 aa19.75■□□□□ 0.75
SPAST-204ENST00000621856 POLR1BQ9H9Y6 1135 aa19.75■□□□□ 0.75
SPAST-204ENST00000621856 C19orf25Q9UFG5 118 aaPredicted RBP19.75■□□□□ 0.75
SPAST-204ENST00000621856 NXT1Q9UKK6 140 aaKnown RBP19.75■□□□□ 0.75
SPAST-204ENST00000621856 C9J4A7 227 aa19.74■□□□□ 0.75
SPAST-204ENST00000621856 TO15178 435 aa19.74■□□□□ 0.75
SPAST-204ENST00000621856 LYPD3O95274 346 aa19.74■□□□□ 0.75
SPAST-204ENST00000621856 TP53P04637 393 aaPredicted RBP19.74■□□□□ 0.75
SPAST-204ENST00000621856 ITIH1P19827 911 aa19.74■□□□□ 0.75
SPAST-204ENST00000621856 PTNP21246 168 aa19.74■□□□□ 0.75
SPAST-204ENST00000621856 ACAA2P42765 397 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms