RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 ADIPOR2Q86V24 386 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 GCNT2Q8N0V5 402 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 MARC2Q969Z3 335 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 FAM83CQ9BQN1 747 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 CHRDL1Q9BU40 450 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 IFT22Q9H7X7 185 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 DTLQ9NZJ0 730 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 VAPAQ9P0L0 249 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 ASB3Q9Y575 518 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 SPI1P17947 270 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 FUT4P22083 530 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 CDKN1CP49918 316 aaPredicted RBP6.79□□□□□ -1.32
COLCA1-205ENST00000620864 IRF9Q00978 393 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 ARHGAP11BQ3KRB8 267 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 SFRP4Q6FHJ7 346 aaPredicted RBP6.79□□□□□ -1.32
COLCA1-205ENST00000620864 HEPHL1Q6MZM0 1159 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 TRMT10BQ6PF06 316 aaKnown RBP6.79□□□□□ -1.32
COLCA1-205ENST00000620864 C2CD4AQ8NCU7 369 aaPredicted RBP6.79□□□□□ -1.32
COLCA1-205ENST00000620864 SGK3Q96BR1 496 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 ZNF251Q9BRH9 671 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 ZCCHC4Q9H5U6 513 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 NOX3Q9HBY0 568 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 A3GALT2U3KPV4 340 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 MAN2B1O00754 1011 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 SLC43A1O75387 559 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 OPN1SWP03999 348 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 STSP08842 583 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 CPN1P15169 458 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 ZNF8P17098 575 aaPredicted RBP6.79□□□□□ -1.32
COLCA1-205ENST00000620864 MC3RP41968 323 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 GHRHRQ02643 423 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 TCEAL1Q15170 157 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 NXPE4Q6UWF7 544 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 ASRGL1Q7L266 308 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 ANKK1Q8NFD2 765 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 CMASQ8NFW8 434 aaPredicted RBP6.79□□□□□ -1.32
COLCA1-205ENST00000620864 SCARB1Q8WTV0 552 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 VRTNQ9H8Y1 702 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 ASH2LQ9UBL3 628 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 RNF150Q9ULK6 438 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 A0A0U1RQK1 487 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 TAAR5O14804 337 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 PAX6P26367 422 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 IRS1P35568 1242 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 HNRNPKP61978 463 aaKnown RBP eCLIP6.79□□□□□ -1.32
COLCA1-205ENST00000620864 TAF9Q16594 264 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 MPEG1Q2M385 716 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 SPANXN4Q5MJ08 99 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 NOXRED1Q6NXP6 359 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 TMPRSS9Q7Z410 1059 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 MFSD6LQ8IWD5 586 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 KAZALD1Q96I82 304 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 PINK1Q9BXM7 581 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 SMOXQ9NWM0 555 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 GAR1Q9NY12 217 aaKnown RBP6.79□□□□□ -1.32
COLCA1-205ENST00000620864 TRAV18A0A075B6X5 111 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 BMP1P13497 986 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 HCCSP53701 268 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 STEAP4Q687X5 459 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 DBX2Q6ZNG2 339 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 TCTE3Q8IZS6 198 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 SUMF1Q8NBK3 374 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 OR5D16Q8NGK9 328 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 SLC2A12Q8TD20 617 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 IRF7Q92985 503 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 THOC3Q96J01 351 aaKnown RBP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 CACFD1Q9UGQ2 172 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 NOCTQ9UK39 431 aaKnown RBP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 TMEM200CA6NKL6 621 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 NRP1O14786 923 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 ARPC1BO15143 372 aaKnown RBP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 ADAM23O75077 832 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 PSMB3P49720 205 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 NR0B1P51843 470 aaKnown RBP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 CASP7P55210 303 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 SLC10A1Q14973 349 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 TMEM225Q6GV28 225 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 NDUFAF7Q7L592 441 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 MAMDC2Q7Z304 686 aaPredicted RBP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 C12orf29Q8N999 325 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 C7orf43Q8WVR3 580 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 HRH4Q9H3N8 390 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 RDH14Q9HBH5 336 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 SERTAD3Q9UJW9 196 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 ZNF891A8MT65 544 aaPredicted RBP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 IQCF5A8MTL0 148 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 PPP5D1E7EU14 171 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 C6orf47O95873 294 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 MMP7P09237 267 aaPredicted RBP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 MPC1LP0DKB6 136 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 UBL4AP11441 157 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 CHRNB4P30926 498 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 STK19P49842 368 aaPredicted RBP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 OPCMLQ14982 345 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 TBCEQ15813 527 aaPredicted RBP6.78□□□□□ -1.32
COLCA1-205ENST00000620864 OR9A1PQ8NGU1 263 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 OR10K1Q8NGX5 313 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 CA5BP1Q8WTZ4 195 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 FBXL18Q96ME1 805 aa6.78□□□□□ -1.32
COLCA1-205ENST00000620864 UBL7Q96S82 380 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms