RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 GMEB1Q9Y692 573 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 CENPVL1A0A0U1RR11 272 aa16.59■□□□□ 0.25
LITAF-220ENST00000620789 GMNCA6NCL1 334 aa16.59■□□□□ 0.25
LITAF-220ENST00000620789 GMFGO60234 142 aa16.59■□□□□ 0.25
LITAF-220ENST00000620789 TNFRSF21O75509 655 aa16.59■□□□□ 0.25
LITAF-220ENST00000620789 ACTL6AO96019 429 aa16.59■□□□□ 0.25
LITAF-220ENST00000620789 ESRRAP11474 423 aaPredicted RBP16.59■□□□□ 0.25
LITAF-220ENST00000620789 BMP7P18075 431 aa16.59■□□□□ 0.25
LITAF-220ENST00000620789 DRD4P21917 467 aa16.59■□□□□ 0.25
LITAF-220ENST00000620789 PPIBP23284 216 aaKnown RBP16.59■□□□□ 0.25
LITAF-220ENST00000620789 ADSLP30566 484 aaPredicted RBP16.59■□□□□ 0.25
LITAF-220ENST00000620789 RNF144AP50876 292 aaPredicted RBP16.59■□□□□ 0.25
LITAF-220ENST00000620789 GFRA1P56159 465 aa16.59■□□□□ 0.25
LITAF-220ENST00000620789 ZNF117Q03924 483 aa16.59■□□□□ 0.25
LITAF-220ENST00000620789 FADDQ13158 208 aa16.59■□□□□ 0.25
LITAF-220ENST00000620789 MTFR2Q6P444 385 aa16.59■□□□□ 0.25
LITAF-220ENST00000620789 C3P1Q6ZMU1 363 aa16.59■□□□□ 0.25
LITAF-220ENST00000620789 LRRC74BQ6ZQY2 392 aa16.59■□□□□ 0.25
LITAF-220ENST00000620789 RETREG3Q86VR2 466 aa16.59■□□□□ 0.25
LITAF-220ENST00000620789 EID3Q8N140 333 aa16.59■□□□□ 0.25
LITAF-220ENST00000620789 ABTB1Q969K4 478 aaPredicted RBP16.59■□□□□ 0.25
LITAF-220ENST00000620789 SH3YL1Q96HL8 342 aaPredicted RBP16.59■□□□□ 0.25
LITAF-220ENST00000620789 TIMP4Q99727 224 aa16.59■□□□□ 0.25
LITAF-220ENST00000620789 UGT2B28Q9BY64 529 aa16.59■□□□□ 0.25
LITAF-220ENST00000620789 FAM107BQ9H098 131 aa16.59■□□□□ 0.25
LITAF-220ENST00000620789 SLC38A1Q9H2H9 487 aa16.59■□□□□ 0.25
LITAF-220ENST00000620789 SUCOQ9UBS9 1254 aaKnown RBP16.59■□□□□ 0.25
LITAF-220ENST00000620789 WIPF3A6NGB9 483 aa16.58■□□□□ 0.24
LITAF-220ENST00000620789 SERINC4A6NH21 518 aa16.58■□□□□ 0.24
LITAF-220ENST00000620789 FIGNL2A6NMB9 653 aa16.58■□□□□ 0.24
LITAF-220ENST00000620789 E9PLN8 166 aa16.58■□□□□ 0.24
LITAF-220ENST00000620789 SLC22A2O15244 555 aa16.58■□□□□ 0.24
LITAF-220ENST00000620789 HCRTR2O43614 444 aa16.58■□□□□ 0.24
LITAF-220ENST00000620789 CHRM4P08173 479 aa16.58■□□□□ 0.24
LITAF-220ENST00000620789 NR2F1P10589 423 aa16.58■□□□□ 0.24
LITAF-220ENST00000620789 HK1P19367 917 aa16.58■□□□□ 0.24
LITAF-220ENST00000620789 TCEA1P23193 301 aaKnown RBP16.58■□□□□ 0.24
LITAF-220ENST00000620789 CHRNEQ04844 493 aa16.58■□□□□ 0.24
LITAF-220ENST00000620789 MAPRE2Q15555 327 aa16.58■□□□□ 0.24
LITAF-220ENST00000620789 MAPK11Q15759 364 aa16.58■□□□□ 0.24
LITAF-220ENST00000620789 MAPK14Q16539 360 aa16.58■□□□□ 0.24
LITAF-220ENST00000620789 ZNF585AQ6P3V2 769 aa16.58■□□□□ 0.24
LITAF-220ENST00000620789 CPLX4Q7Z7G2 160 aa16.58■□□□□ 0.24
LITAF-220ENST00000620789 DHDDSQ86SQ9 333 aa16.58■□□□□ 0.24
LITAF-220ENST00000620789 B4GALNT2Q8NHY0 566 aa16.58■□□□□ 0.24
LITAF-220ENST00000620789 CCDC120Q96HB5 630 aa16.58■□□□□ 0.24
LITAF-220ENST00000620789 SFXN2Q96NB2 322 aa16.58■□□□□ 0.24
LITAF-220ENST00000620789 VKORC1Q9BQB6 163 aa16.58■□□□□ 0.24
LITAF-220ENST00000620789 PRDM14Q9GZV8 571 aa16.58■□□□□ 0.24
LITAF-220ENST00000620789 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.58■□□□□ 0.24
LITAF-220ENST00000620789 RPH3AQ9Y2J0 694 aaPredicted RBP16.58■□□□□ 0.24
LITAF-220ENST00000620789 CAPN7Q9Y6W3 813 aa16.58■□□□□ 0.24
LITAF-220ENST00000620789 COL12A1Q99715 3063 aa16.58■□□□□ 0.24
LITAF-220ENST00000620789 GTPBP1O00178 669 aaKnown RBP16.57■□□□□ 0.24
LITAF-220ENST00000620789 FBP2O00757 339 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 OIP5O43482 229 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 WDR1O75083 606 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 BCHEP06276 602 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 TFPTP0C1Z6 253 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 RNF224P0DH78 156 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 UBL4AP11441 157 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 BMP2P12643 396 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 CHMP24386 653 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 ADH7P40394 386 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 B3GALT5-AS1P59052 145 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 NFYCQ13952 458 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 GLYR1Q49A26 553 aaPredicted RBP16.57■□□□□ 0.24
LITAF-220ENST00000620789 DCST1Q5T197 706 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 RAET1LQ5VY80 246 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 AAGABQ6PD74 315 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 CBLN3Q6UW01 205 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 ARSKQ6UWY0 536 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 SLC38A5Q8WUX1 472 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 PMM1Q92871 262 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 ZG16BQ96DA0 208 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 DMRTA2Q96SC8 542 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 RUBCNLQ9H714 662 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 CALML5Q9NZT1 146 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 ARMCX1Q9P291 453 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 CORO2BQ9UQ03 480 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 CARD8Q9Y2G2 431 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 L3MBTL1Q9Y468 752 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 DOPEY1Q5JWR5 2465 aa16.57■□□□□ 0.24
LITAF-220ENST00000620789 A0A087WZY1 265 aa16.56■□□□□ 0.24
LITAF-220ENST00000620789 TMEM247A6NEH6 219 aa16.56■□□□□ 0.24
LITAF-220ENST00000620789 EVPLLA8MZ36 301 aa16.56■□□□□ 0.24
LITAF-220ENST00000620789 ZNF264O43296 627 aa16.56■□□□□ 0.24
LITAF-220ENST00000620789 SNX3O60493 162 aa16.56■□□□□ 0.24
LITAF-220ENST00000620789 EIF4E2O60573 245 aaKnown RBP16.56■□□□□ 0.24
LITAF-220ENST00000620789 CCDC22O60826 627 aa16.56■□□□□ 0.24
LITAF-220ENST00000620789 NUDT7P0C024 238 aa16.56■□□□□ 0.24
LITAF-220ENST00000620789 GABRA1P14867 456 aa16.56■□□□□ 0.24
LITAF-220ENST00000620789 ACVR2AP27037 513 aa16.56■□□□□ 0.24
LITAF-220ENST00000620789 P2RX1P51575 399 aa16.56■□□□□ 0.24
LITAF-220ENST00000620789 CRISP3P54108 245 aa16.56■□□□□ 0.24
LITAF-220ENST00000620789 SUMO3P55854 103 aaPredicted RBP16.56■□□□□ 0.24
LITAF-220ENST00000620789 GNA13Q14344 377 aa16.56■□□□□ 0.24
LITAF-220ENST00000620789 FGFBP1Q14512 234 aa16.56■□□□□ 0.24
LITAF-220ENST00000620789 NDUFAF6Q330K2 333 aa16.56■□□□□ 0.24
LITAF-220ENST00000620789 RUNDC3AQ59EK9 446 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms