RNA–Protein interactions for RNA: ENST00000618700.4

UPF3A-211, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 1,210 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-211ENST00000618700 GLSO94925 669 aaPredicted RBP17.99■□□□□ 0.47
UPF3A-211ENST00000618700 PLAURQ03405 335 aa17.99■□□□□ 0.47
UPF3A-211ENST00000618700 NFATC3Q12968 1075 aa17.99■□□□□ 0.47
UPF3A-211ENST00000618700 VEZF1Q14119 521 aa17.99■□□□□ 0.47
UPF3A-211ENST00000618700 FGFBP1Q14512 234 aa17.99■□□□□ 0.47
UPF3A-211ENST00000618700 HYAL4Q2M3T9 481 aa17.99■□□□□ 0.47
UPF3A-211ENST00000618700 BNC2Q6ZN30 1099 aaPredicted RBP17.99■□□□□ 0.47
UPF3A-211ENST00000618700 MISPQ8IVT2 679 aa17.99■□□□□ 0.47
UPF3A-211ENST00000618700 MICU2Q8IYU8 434 aa17.99■□□□□ 0.47
UPF3A-211ENST00000618700 WDSUB1Q8N9V3 476 aa17.99■□□□□ 0.47
UPF3A-211ENST00000618700 ZFP64Q9NPA5 681 aa17.99■□□□□ 0.47
UPF3A-211ENST00000618700 ADA2Q9NZK5 511 aa17.99■□□□□ 0.47
UPF3A-211ENST00000618700 CD300AQ9UGN4 299 aa17.99■□□□□ 0.47
UPF3A-211ENST00000618700 ANAPC2Q9UJX6 822 aa17.99■□□□□ 0.47
UPF3A-211ENST00000618700 GPC6Q9Y625 555 aaPredicted RBP17.99■□□□□ 0.47
UPF3A-211ENST00000618700 PRRC2CQ9Y520 2896 aaKnown RBP17.98■□□□□ 0.47
UPF3A-211ENST00000618700 NDUFB5O43674 189 aa17.98■□□□□ 0.47
UPF3A-211ENST00000618700 C1QL1O75973 258 aa17.98■□□□□ 0.47
UPF3A-211ENST00000618700 PRB1P04280 392 aa17.98■□□□□ 0.47
UPF3A-211ENST00000618700 DBIP07108 87 aaKnown RBP17.98■□□□□ 0.47
UPF3A-211ENST00000618700 THBS1P07996 1170 aa17.98■□□□□ 0.47
UPF3A-211ENST00000618700 NID1P14543 1247 aa17.98■□□□□ 0.47
UPF3A-211ENST00000618700 ELAVL4P26378 380 aaKnown RBP17.98■□□□□ 0.47
UPF3A-211ENST00000618700 ADH7P40394 386 aa17.98■□□□□ 0.47
UPF3A-211ENST00000618700 SPATS1Q496A3 300 aa17.98■□□□□ 0.47
UPF3A-211ENST00000618700 RNFT1Q5M7Z0 435 aa17.98■□□□□ 0.47
UPF3A-211ENST00000618700 SAMD4BQ5PRF9 694 aaKnown RBP17.98■□□□□ 0.47
UPF3A-211ENST00000618700 TIGD3Q6B0B8 471 aa17.98■□□□□ 0.47
UPF3A-211ENST00000618700 CCDC80Q76M96 950 aa17.98■□□□□ 0.47
UPF3A-211ENST00000618700 HMGN2P46Q86SG4 172 aa17.98■□□□□ 0.47
UPF3A-211ENST00000618700 IFNEQ86WN2 208 aa17.98■□□□□ 0.47
UPF3A-211ENST00000618700 PEX5LQ8IYB4 626 aa17.98■□□□□ 0.47
UPF3A-211ENST00000618700 ZNF614Q8N883 585 aa17.98■□□□□ 0.47
UPF3A-211ENST00000618700 FADS6Q8N9I5 356 aa17.98■□□□□ 0.47
UPF3A-211ENST00000618700 GATSQ8NAP1 163 aa17.98■□□□□ 0.47
UPF3A-211ENST00000618700 CDRT15Q96T59 188 aa17.98■□□□□ 0.47
UPF3A-211ENST00000618700 RSPO3Q9BXY4 272 aaPredicted RBP17.98■□□□□ 0.47
UPF3A-211ENST00000618700 TTTY12Q9BZ98 90 aa17.98■□□□□ 0.47
UPF3A-211ENST00000618700 ZNF703Q9H7S9 590 aaPredicted RBP17.98■□□□□ 0.47
UPF3A-211ENST00000618700 SDHAF3Q9NRP4 125 aa17.98■□□□□ 0.47
UPF3A-211ENST00000618700 COL6A6A6NMZ7 2263 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 NINQ8N4C6 2090 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 H3BNH8 94 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 GNB5O14775 395 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 HSD17B1P14061 328 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 AQP1P29972 269 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 RFC3P40938 356 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 MASP1P48740 699 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 RNF144AP50876 292 aaPredicted RBP17.97■□□□□ 0.47
UPF3A-211ENST00000618700 C17orf67Q0P5P2 114 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 FXNQ16595 210 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 LIN52Q52LA3 116 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 INTS11Q5TA45 600 aaKnown RBP17.97■□□□□ 0.47
UPF3A-211ENST00000618700 KRT73Q86Y46 540 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 PLCZ1Q86YW0 608 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 CMIPQ8IY22 773 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 ARHGAP24Q8N264 748 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 FAM71CQ8NEG0 241 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 OR52P1PQ8NH57 321 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 WDR60Q8WVS4 1066 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 ZNF607Q96SK3 696 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 KCTD14Q9BQ13 255 aaPredicted RBP17.97■□□□□ 0.47
UPF3A-211ENST00000618700 UBQLN3Q9H347 655 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 HHATLQ9HCP6 504 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 PPP4R1LQ9P1A2 415 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 PACSIN3Q9UKS6 424 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 ZNF443Q9Y2A4 671 aaPredicted RBP17.97■□□□□ 0.47
UPF3A-211ENST00000618700 NTNG1Q9Y2I2 539 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 C15orf41Q9Y2V0 281 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 IFT52Q9Y366 437 aa17.97■□□□□ 0.47
UPF3A-211ENST00000618700 CLDN24A6NM45 220 aa17.96■□□□□ 0.47
UPF3A-211ENST00000618700 OIP5O43482 229 aa17.96■□□□□ 0.47
UPF3A-211ENST00000618700 BCAS1O75363 584 aaPredicted RBP17.96■□□□□ 0.47
UPF3A-211ENST00000618700 PDE9AO76083 593 aa17.96■□□□□ 0.47
UPF3A-211ENST00000618700 RFPL3SP0C7P2 107 aa17.96■□□□□ 0.47
UPF3A-211ENST00000618700 PABPC4LP0CB38 370 aaKnown RBP17.96■□□□□ 0.47
UPF3A-211ENST00000618700 UBL4AP11441 157 aa17.96■□□□□ 0.47
UPF3A-211ENST00000618700 ZNF24P17028 368 aa17.96■□□□□ 0.47
UPF3A-211ENST00000618700 ENDOUP21128 410 aaKnown RBP17.96■□□□□ 0.47
UPF3A-211ENST00000618700 HTR1EP28566 365 aa17.96■□□□□ 0.47
UPF3A-211ENST00000618700 PGM1P36871 562 aa17.96■□□□□ 0.47
UPF3A-211ENST00000618700 CRYBA2P53672 197 aa17.96■□□□□ 0.47
UPF3A-211ENST00000618700 EEF1A1P68104 462 aaKnown RBP17.96■□□□□ 0.47
UPF3A-211ENST00000618700 GABPB1Q06547 395 aaPredicted RBP17.96■□□□□ 0.47
UPF3A-211ENST00000618700 CEACAM7Q14002 265 aa17.96■□□□□ 0.47
UPF3A-211ENST00000618700 DNAL1Q4LDG9 190 aa17.96■□□□□ 0.47
UPF3A-211ENST00000618700 PRR30Q53SZ7 412 aaPredicted RBP17.96■□□□□ 0.47
UPF3A-211ENST00000618700 RNF220Q5VTB9 566 aa17.96■□□□□ 0.47
UPF3A-211ENST00000618700 OR5M10Q6IEU7 315 aa17.96■□□□□ 0.47
UPF3A-211ENST00000618700 PATL1Q86TB9 770 aaKnown RBP17.96■□□□□ 0.47
UPF3A-211ENST00000618700 VRK2Q86Y07 508 aa17.96■□□□□ 0.47
UPF3A-211ENST00000618700 SIAH3Q8IW03 269 aa17.96■□□□□ 0.47
UPF3A-211ENST00000618700 TMEM251Q8N6I4 163 aa17.96■□□□□ 0.47
UPF3A-211ENST00000618700 OR1J4Q8NGS1 313 aa17.96■□□□□ 0.47
UPF3A-211ENST00000618700 PHOSPHO1Q8TCT1 267 aa17.96■□□□□ 0.47
UPF3A-211ENST00000618700 DUSP19Q8WTR2 217 aa17.96■□□□□ 0.47
UPF3A-211ENST00000618700 JSRP1Q96MG2 331 aaPredicted RBP17.96■□□□□ 0.47
UPF3A-211ENST00000618700 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.96■□□□□ 0.47
UPF3A-211ENST00000618700 PLA2G2EQ9NZK7 142 aa17.96■□□□□ 0.47
UPF3A-211ENST00000618700 FBXL2Q9UKC9 423 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms