RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 SLC35A5Q9BS91 424 aa14.47□□□□□ -0.09
BRCA1-228ENST00000618469 OR51I1Q9H343 314 aa14.47□□□□□ -0.09
BRCA1-228ENST00000618469 BTNL2Q9UIR0 455 aa14.47□□□□□ -0.09
BRCA1-228ENST00000618469 VDAC3Q9Y277 283 aa14.47□□□□□ -0.09
BRCA1-228ENST00000618469 A0A1W2PQD3 144 aa14.46□□□□□ -0.09
BRCA1-228ENST00000618469 H3BML4 177 aa14.46□□□□□ -0.09
BRCA1-228ENST00000618469 UBDO15205 165 aa14.46□□□□□ -0.09
BRCA1-228ENST00000618469 POLR3GO15318 223 aaPredicted RBP14.46□□□□□ -0.09
BRCA1-228ENST00000618469 TOXO94900 526 aa14.46□□□□□ -0.09
BRCA1-228ENST00000618469 SOX30O94993 753 aa14.46□□□□□ -0.09
BRCA1-228ENST00000618469 CPN1P15169 458 aa14.46□□□□□ -0.09
BRCA1-228ENST00000618469 ZNF708P17019 499 aa14.46□□□□□ -0.09
BRCA1-228ENST00000618469 KHKP50053 298 aa14.46□□□□□ -0.09
BRCA1-228ENST00000618469 CLDN18P56856 261 aa14.46□□□□□ -0.09
BRCA1-228ENST00000618469 GSTA3Q16772 222 aa14.46□□□□□ -0.09
BRCA1-228ENST00000618469 TNFAIP8L2Q6P589 184 aaPredicted RBP14.46□□□□□ -0.09
BRCA1-228ENST00000618469 EPGNQ6UW88 154 aa14.46□□□□□ -0.09
BRCA1-228ENST00000618469 ARSKQ6UWY0 536 aa14.46□□□□□ -0.09
BRCA1-228ENST00000618469 DNAJC14Q6Y2X3 702 aaPredicted RBP14.46□□□□□ -0.09
BRCA1-228ENST00000618469 MEX3BQ6ZN04 569 aaKnown RBP14.46□□□□□ -0.09
BRCA1-228ENST00000618469 C16orf62Q7Z3J2 963 aa14.46□□□□□ -0.09
BRCA1-228ENST00000618469 MISPQ8IVT2 679 aa14.46□□□□□ -0.09
BRCA1-228ENST00000618469 UBQLNLQ8IYU4 475 aa14.46□□□□□ -0.09
BRCA1-228ENST00000618469 ZNF527Q8NB42 609 aa14.46□□□□□ -0.09
BRCA1-228ENST00000618469 GLB1L3Q8NCI6 653 aaPredicted RBP14.46□□□□□ -0.09
BRCA1-228ENST00000618469 SMPDL3BQ92485 455 aa14.46□□□□□ -0.09
BRCA1-228ENST00000618469 PANX1Q96RD7 426 aa14.46□□□□□ -0.09
BRCA1-228ENST00000618469 ACBD3Q9H3P7 528 aa14.46□□□□□ -0.09
BRCA1-228ENST00000618469 HHATLQ9HCP6 504 aa14.46□□□□□ -0.09
BRCA1-228ENST00000618469 KCNJ16Q9NPI9 418 aa14.46□□□□□ -0.09
BRCA1-228ENST00000618469 OR2M5A3KFT3 312 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 CD8B2A6NJW9 211 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 DUXAA6NLW8 204 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 CLCA1A8K7I4 914 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 HSPB2A8KAH6 182 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 SHISA8B8ZZ34 492 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 SEC14L5O43304 696 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 TNFRSF21O75509 655 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 SLC22A3O75751 556 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 AK1P00568 194 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 IL2RAP01589 272 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 CAPN3P20807 821 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 TIMP3P35625 211 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 CDKN2CP42773 168 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 HCFC1P51610 2035 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 ZNF41P51814 821 aaPredicted RBP14.45□□□□□ -0.1
BRCA1-228ENST00000618469 ART1P52961 327 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 HSPB2Q16082 182 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 TIGD2Q4W5G0 525 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.45□□□□□ -0.1
BRCA1-228ENST00000618469 SAXO2Q658L1 398 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 PLXDC2Q6UX71 529 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 LIX1LQ8IVB5 337 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 MIER2Q8N344 545 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 TRIML2Q8N7C3 387 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 OR9I1Q8NGQ6 314 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 PHOSPHO1Q8TCT1 267 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 ZPLD1Q8TCW7 415 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 MIPOL1Q8TD10 442 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 NRGNQ92686 78 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 NEURL3Q96EH8 262 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 PIGQQ9BRB3 760 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 INPP5KQ9BT40 448 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 MCCC2Q9HCC0 563 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 TCF7L2Q9NQB0 619 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 NPDC1Q9NQX5 325 aaPredicted RBP14.45□□□□□ -0.1
BRCA1-228ENST00000618469 SDR39U1Q9NRG7 319 aaPredicted RBP14.45□□□□□ -0.1
BRCA1-228ENST00000618469 ZIM2Q9NZV7 527 aa14.45□□□□□ -0.1
BRCA1-228ENST00000618469 PRRC2AP48634 2157 aaKnown RBP14.44□□□□□ -0.1
BRCA1-228ENST00000618469 PCNX3Q9H6A9 2034 aa14.44□□□□□ -0.1
BRCA1-228ENST00000618469 MBD3L4A6NDZ8 208 aaPredicted RBP14.44□□□□□ -0.1
BRCA1-228ENST00000618469 MBD3L3A6NE82 208 aaPredicted RBP14.44□□□□□ -0.1
BRCA1-228ENST00000618469 CCDC154A6NI56 674 aa14.44□□□□□ -0.1
BRCA1-228ENST00000618469 MBD3L5A6NJ08 208 aaPredicted RBP14.44□□□□□ -0.1
BRCA1-228ENST00000618469 DVL2O14641 736 aa14.44□□□□□ -0.1
BRCA1-228ENST00000618469 HCRTR2O43614 444 aa14.44□□□□□ -0.1
BRCA1-228ENST00000618469 GSNP06396 782 aa14.44□□□□□ -0.1
BRCA1-228ENST00000618469 OR12D1P0DN82 309 aa14.44□□□□□ -0.1
BRCA1-228ENST00000618469 PEPDP12955 493 aa14.44□□□□□ -0.1
BRCA1-228ENST00000618469 BMP5P22003 454 aa14.44□□□□□ -0.1
BRCA1-228ENST00000618469 CEACAM8P31997 349 aaPredicted RBP14.44□□□□□ -0.1
BRCA1-228ENST00000618469 ATP12AP54707 1039 aa14.44□□□□□ -0.1
BRCA1-228ENST00000618469 STX1BP61266 288 aa14.44□□□□□ -0.1
BRCA1-228ENST00000618469 ZNF117Q03924 483 aa14.44□□□□□ -0.1
BRCA1-228ENST00000618469 TFF3Q07654 80 aa14.44□□□□□ -0.1
BRCA1-228ENST00000618469 LRRC74AQ0VAA2 488 aa14.44□□□□□ -0.1
BRCA1-228ENST00000618469 SLC25A35Q3KQZ1 300 aa14.44□□□□□ -0.1
BRCA1-228ENST00000618469 ATAD3BQ5T9A4 648 aa14.44□□□□□ -0.1
BRCA1-228ENST00000618469 OLIG3Q7RTU3 272 aa14.44□□□□□ -0.1
BRCA1-228ENST00000618469 C9orf106Q8NAJ2 232 aa14.44□□□□□ -0.1
BRCA1-228ENST00000618469 CHDHQ8NE62 594 aaPredicted RBP14.44□□□□□ -0.1
BRCA1-228ENST00000618469 GOT1L1Q8NHS2 421 aaPredicted RBP14.44□□□□□ -0.1
BRCA1-228ENST00000618469 B4GALNT2Q8NHY0 566 aa14.44□□□□□ -0.1
BRCA1-228ENST00000618469 MBD3L2Q8NHZ7 208 aaPredicted RBP14.44□□□□□ -0.1
BRCA1-228ENST00000618469 RAB8BQ92930 207 aa14.44□□□□□ -0.1
BRCA1-228ENST00000618469 SDF2Q99470 211 aa14.44□□□□□ -0.1
BRCA1-228ENST00000618469 EBF4Q9BQW3 602 aa14.44□□□□□ -0.1
BRCA1-228ENST00000618469 HOXD1Q9GZZ0 328 aa14.44□□□□□ -0.1
BRCA1-228ENST00000618469 CALHM2Q9HA72 323 aa14.44□□□□□ -0.1
BRCA1-228ENST00000618469 EXD2Q9NVH0 621 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms