RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 AGR2O95994 175 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 SAGP10523 405 aaPredicted RBP11.51□□□□□ -0.57
CIITA-212ENST00000618207 FOSL1P15407 271 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 MLLT3P42568 568 aaPredicted RBP11.51□□□□□ -0.57
CIITA-212ENST00000618207 GCGRP47871 477 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 CSTF1Q05048 431 aaKnown RBP11.51□□□□□ -0.57
CIITA-212ENST00000618207 SMAD4Q13485 552 aaKnown RBP11.51□□□□□ -0.57
CIITA-212ENST00000618207 ELOCQ15369 112 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 TRIM16LQ309B1 348 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 RANBP3LQ86VV4 465 aaPredicted RBP11.51□□□□□ -0.57
CIITA-212ENST00000618207 ATCAYQ86WG3 371 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 GATAD2AQ86YP4 633 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 FAM26EQ8N5C1 309 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 GATSQ8NAP1 163 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 OR51A7Q8NH64 312 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 SLC38A2Q96QD8 506 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 CDADC1Q9BWV3 514 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 SPRTNQ9H040 489 aaPredicted RBP11.51□□□□□ -0.57
CIITA-212ENST00000618207 CAB39Q9Y376 341 aaPredicted RBP11.51□□□□□ -0.57
CIITA-212ENST00000618207 PCDHGA3Q9Y5H0 932 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 FAM221BA6H8Z2 402 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 TBX1O43435 398 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 ADAM11O75078 769 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 KCNK2O95069 426 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 CSF2P04141 144 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 NID1P14543 1247 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 GLULP15104 373 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 IL9P15248 144 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 GTF2E2P29084 291 aaKnown RBP11.5□□□□□ -0.57
CIITA-212ENST00000618207 CDH11P55287 796 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 PSG6Q00889 435 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 TEKQ02763 1124 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 CADM2Q8N3J6 435 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 MFSD4AQ8N468 514 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 OR9Q1Q8NGQ5 310 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 TMEM163Q8TC26 289 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 RELTQ969Z4 430 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 VMP1Q96GC9 406 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 BCL7BQ9BQE9 202 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 WDR12Q9GZL7 423 aaKnown RBP11.5□□□□□ -0.57
CIITA-212ENST00000618207 RACGAP1Q9H0H5 632 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 MARCH7Q9H992 704 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 SNTG1Q9NSN8 517 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 NLGN3Q9NZ94 848 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 NTMQ9P121 344 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 ERVK-19Q9WJR5 959 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 TRAV27A0A087WT01 109 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 SOCS6O14544 535 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 CTDSP2O14595 271 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 IGLV3-19P01714 112 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 MYL12AP19105 171 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 MAKP20794 623 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 OR1D4P47884 311 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 MTNR1AP48039 350 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 EMDP50402 254 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 TUBA1BP68363 451 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 C1DQ13901 141 aaKnown RBP11.5□□□□□ -0.57
CIITA-212ENST00000618207 NCF4Q15080 339 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 TMEM201Q5SNT2 666 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 COL13A1Q5TAT6 717 aaPredicted RBP11.5□□□□□ -0.57
CIITA-212ENST00000618207 TUBA1AQ71U36 451 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 SIX5Q8N196 739 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 LINC00471Q8N535 108 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 LMF1Q96S06 567 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 MND1Q9BWT6 205 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 PRTFDC1Q9NRG1 225 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 TBCCD1Q9NVR7 557 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 CDHR4A6H8M9 788 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 METTL15A6NJ78 407 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 ZNF217O75362 1048 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 RAB36O95755 333 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 IGKV1D-16P01601 117 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 DBIP07108 87 aaKnown RBP11.5□□□□□ -0.57
CIITA-212ENST00000618207 RNH1P13489 461 aaKnown RBP11.5□□□□□ -0.57
CIITA-212ENST00000618207 PLAURQ03405 335 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 FAM53BQ14153 422 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 OCLNQ16625 522 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 KLHL12Q53G59 568 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 CD300LDQ6UXZ3 194 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 SLC36A4Q6YBV0 504 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 RASSF6Q6ZTQ3 369 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 MBOAT2Q6ZWT7 520 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 CPOQ8IVL8 374 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 GHDCQ8N2G8 530 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 NANOGP1Q8N7R0 232 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 Q8N9G6 341 aaPredicted RBP11.5□□□□□ -0.57
CIITA-212ENST00000618207 KBTBD8Q8NFY9 601 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.5□□□□□ -0.57
CIITA-212ENST00000618207 DNAJA3Q96EY1 480 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 COX4I2Q96KJ9 171 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 PRSS27Q9BQR3 290 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 ASPNQ9BXN1 380 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 NUAK2Q9H093 628 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 DUSP22Q9NRW4 184 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 OR10H1Q9Y4A9 318 aa11.5□□□□□ -0.57
CIITA-212ENST00000618207 HYKKA2RU49 373 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 TRAPPC13A5PLN9 417 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 METTL12A8MUP2 240 aa11.49□□□□□ -0.57
CIITA-212ENST00000618207 PSMA1P25786 263 aaKnown RBP11.49□□□□□ -0.57
CIITA-212ENST00000618207 CD27P26842 260 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms