RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 MBD3L5A6NJ08 208 aaPredicted RBP22.52■■□□□ 1.2
PMS1-220ENST00000618056 H0Y3Z8 333 aa22.52■■□□□ 1.2
PMS1-220ENST00000618056 TCEA1P23193 301 aaKnown RBP22.52■■□□□ 1.2
PMS1-220ENST00000618056 MRPL19P49406 292 aaKnown RBP22.52■■□□□ 1.2
PMS1-220ENST00000618056 TFF3Q07654 80 aa22.52■■□□□ 1.2
PMS1-220ENST00000618056 CD226Q15762 336 aa22.52■■□□□ 1.2
PMS1-220ENST00000618056 TMEM44Q2T9K0 475 aa22.52■■□□□ 1.2
PMS1-220ENST00000618056 FLYWCH1Q4VC44 716 aa22.52■■□□□ 1.2
PMS1-220ENST00000618056 KLHL26Q53HC5 615 aa22.52■■□□□ 1.2
PMS1-220ENST00000618056 HEPHL1Q6MZM0 1159 aa22.52■■□□□ 1.2
PMS1-220ENST00000618056 MIER2Q8N344 545 aa22.52■■□□□ 1.2
PMS1-220ENST00000618056 GATSQ8NAP1 163 aa22.52■■□□□ 1.2
PMS1-220ENST00000618056 ACBD4Q8NC06 268 aa22.52■■□□□ 1.2
PMS1-220ENST00000618056 MBD3L2Q8NHZ7 208 aaPredicted RBP22.52■■□□□ 1.2
PMS1-220ENST00000618056 TUBA1CQ9BQE3 449 aa22.52■■□□□ 1.2
PMS1-220ENST00000618056 PIGQQ9BRB3 760 aa22.52■■□□□ 1.2
PMS1-220ENST00000618056 UCK2Q9BZX2 261 aa22.52■■□□□ 1.2
PMS1-220ENST00000618056 EXD2Q9NVH0 621 aa22.52■■□□□ 1.2
PMS1-220ENST00000618056 A0A087WZY1 265 aa22.51■■□□□ 1.19
PMS1-220ENST00000618056 CCDC154A6NI56 674 aa22.51■■□□□ 1.19
PMS1-220ENST00000618056 FAM90A27PA6NNH2 459 aa22.51■■□□□ 1.19
PMS1-220ENST00000618056 IL2RAP01589 272 aa22.51■■□□□ 1.19
PMS1-220ENST00000618056 GUSBP08236 651 aa22.51■■□□□ 1.19
PMS1-220ENST00000618056 PEPDP12955 493 aa22.51■■□□□ 1.19
PMS1-220ENST00000618056 IDH3AP50213 366 aa22.51■■□□□ 1.19
PMS1-220ENST00000618056 SLC25A35Q3KQZ1 300 aa22.51■■□□□ 1.19
PMS1-220ENST00000618056 ARHGAP11BQ3KRB8 267 aa22.51■■□□□ 1.19
PMS1-220ENST00000618056 AP1ARQ63HQ0 302 aa22.51■■□□□ 1.19
PMS1-220ENST00000618056 MSANTD1Q6ZTZ1 278 aa22.51■■□□□ 1.19
PMS1-220ENST00000618056 TNIP2Q8NFZ5 429 aa22.51■■□□□ 1.19
PMS1-220ENST00000618056 MARVELD3Q96A59 401 aa22.51■■□□□ 1.19
PMS1-220ENST00000618056 TRIB1Q96RU8 372 aa22.51■■□□□ 1.19
PMS1-220ENST00000618056 INPP5KQ9BT40 448 aa22.51■■□□□ 1.19
PMS1-220ENST00000618056 CCDC28BQ9BUN5 200 aa22.51■■□□□ 1.19
PMS1-220ENST00000618056 NMUR2Q9GZQ4 415 aa22.51■■□□□ 1.19
PMS1-220ENST00000618056 ANKHD1Q8IWZ3 2542 aaKnown RBP22.5■■□□□ 1.19
PMS1-220ENST00000618056 OR2M5A3KFT3 312 aa22.5■■□□□ 1.19
PMS1-220ENST00000618056 STX11O75558 287 aa22.5■■□□□ 1.19
PMS1-220ENST00000618056 CHI3L1P36222 383 aaPredicted RBP22.5■■□□□ 1.19
PMS1-220ENST00000618056 CDKN2CP42773 168 aa22.5■■□□□ 1.19
PMS1-220ENST00000618056 TXNL4AP83876 142 aaKnown RBP22.5■■□□□ 1.19
PMS1-220ENST00000618056 SRYQ05066 204 aa22.5■■□□□ 1.19
PMS1-220ENST00000618056 DDX59Q5T1V6 619 aaKnown RBP eCLIP22.5■■□□□ 1.19
PMS1-220ENST00000618056 ARSKQ6UWY0 536 aa22.5■■□□□ 1.19
PMS1-220ENST00000618056 LIX1LQ8IVB5 337 aa22.5■■□□□ 1.19
PMS1-220ENST00000618056 NAXEQ8NCW5 288 aa22.5■■□□□ 1.19
PMS1-220ENST00000618056 EBF4Q9BQW3 602 aa22.5■■□□□ 1.19
PMS1-220ENST00000618056 ZNF350Q9GZX5 532 aa22.5■■□□□ 1.19
PMS1-220ENST00000618056 ENKD1Q9H0I2 346 aa22.5■■□□□ 1.19
PMS1-220ENST00000618056 ZNF337Q9Y3M9 751 aa22.5■■□□□ 1.19
PMS1-220ENST00000618056 DTNAQ9Y4J8 743 aa22.5■■□□□ 1.19
PMS1-220ENST00000618056 NPIPA5A0A0B4J1W7 369 aa22.49■■□□□ 1.19
PMS1-220ENST00000618056 C7orf72A4D263 438 aa22.49■■□□□ 1.19
PMS1-220ENST00000618056 NKX2-6A6NCS4 301 aa22.49■■□□□ 1.19
PMS1-220ENST00000618056 NPIPA7E9PJI5 369 aa22.49■■□□□ 1.19
PMS1-220ENST00000618056 H3BNH8 94 aa22.49■■□□□ 1.19
PMS1-220ENST00000618056 NPIPA8P0DM63 369 aa22.49■■□□□ 1.19
PMS1-220ENST00000618056 ZNF17P17021 662 aa22.49■■□□□ 1.19
PMS1-220ENST00000618056 KHKP50053 298 aa22.49■■□□□ 1.19
PMS1-220ENST00000618056 POLR2JP52435 117 aaKnown RBP22.49■■□□□ 1.19
PMS1-220ENST00000618056 AQP5P55064 265 aa22.49■■□□□ 1.19
PMS1-220ENST00000618056 CASP9P55211 416 aa22.49■■□□□ 1.19
PMS1-220ENST00000618056 TNFAIP8L2Q6P589 184 aaPredicted RBP22.49■■□□□ 1.19
PMS1-220ENST00000618056 C16orf62Q7Z3J2 963 aa22.49■■□□□ 1.19
PMS1-220ENST00000618056 OR9I1Q8NGQ6 314 aa22.49■■□□□ 1.19
PMS1-220ENST00000618056 B4GALNT2Q8NHY0 566 aa22.49■■□□□ 1.19
PMS1-220ENST00000618056 STON2Q8WXE9 905 aa22.49■■□□□ 1.19
PMS1-220ENST00000618056 RUBCNLQ9H714 662 aa22.49■■□□□ 1.19
PMS1-220ENST00000618056 LRBAP50851 2863 aa22.49■■□□□ 1.19
PMS1-220ENST00000618056 TACC2O95359 2948 aa22.48■■□□□ 1.19
PMS1-220ENST00000618056 FAM234BA2RU67 622 aa22.48■■□□□ 1.19
PMS1-220ENST00000618056 RFXANKO14593 260 aa22.48■■□□□ 1.19
PMS1-220ENST00000618056 OR12D1P0DN82 309 aa22.48■■□□□ 1.19
PMS1-220ENST00000618056 COX6B1P14854 86 aa22.48■■□□□ 1.19
PMS1-220ENST00000618056 POU3F2P20265 443 aaPredicted RBP22.48■■□□□ 1.19
PMS1-220ENST00000618056 GYS2P54840 703 aa22.48■■□□□ 1.19
PMS1-220ENST00000618056 ATAD3BQ5T9A4 648 aa22.48■■□□□ 1.19
PMS1-220ENST00000618056 ZNF621Q6ZSS3 439 aa22.48■■□□□ 1.19
PMS1-220ENST00000618056 PHOSPHO1Q8TCT1 267 aa22.48■■□□□ 1.19
PMS1-220ENST00000618056 XAGE5Q8WWM1 108 aa22.48■■□□□ 1.19
PMS1-220ENST00000618056 OIT3Q8WWZ8 545 aa22.48■■□□□ 1.19
PMS1-220ENST00000618056 ZBTB8AQ96BR9 441 aa22.48■■□□□ 1.19
PMS1-220ENST00000618056 SH3YL1Q96HL8 342 aaPredicted RBP22.48■■□□□ 1.19
PMS1-220ENST00000618056 SPOCK3Q9BQ16 436 aa22.48■■□□□ 1.19
PMS1-220ENST00000618056 TREX2Q9BQ50 279 aaPredicted RBP22.48■■□□□ 1.19
PMS1-220ENST00000618056 POLE3Q9NRF9 147 aa22.48■■□□□ 1.19
PMS1-220ENST00000618056 CLCF1Q9UBD9 225 aa22.48■■□□□ 1.19
PMS1-220ENST00000618056 ZNF629Q9UEG4 869 aaPredicted RBP22.48■■□□□ 1.19
PMS1-220ENST00000618056 ADAM21Q9UKJ8 722 aa22.48■■□□□ 1.19
PMS1-220ENST00000618056 VDAC3Q9Y277 283 aa22.48■■□□□ 1.19
PMS1-220ENST00000618056 CLCA1A8K7I4 914 aa22.47■■□□□ 1.19
PMS1-220ENST00000618056 HCRTR2O43614 444 aa22.47■■□□□ 1.19
PMS1-220ENST00000618056 GMFGO60234 142 aa22.47■■□□□ 1.19
PMS1-220ENST00000618056 FCMRO60667 390 aa22.47■■□□□ 1.19
PMS1-220ENST00000618056 IGFBP2P18065 325 aa22.47■■□□□ 1.19
PMS1-220ENST00000618056 STX1BP61266 288 aa22.47■■□□□ 1.19
PMS1-220ENST00000618056 ZNF117Q03924 483 aa22.47■■□□□ 1.19
PMS1-220ENST00000618056 ZNF141Q15928 474 aa22.47■■□□□ 1.19
PMS1-220ENST00000618056 PLPPR5Q32ZL2 321 aa22.47■■□□□ 1.19
PMS1-220ENST00000618056 GTPBP8Q8N3Z3 284 aaPredicted RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms