RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 PAQR5Q9NXK6 330 aaPredicted RBP20.46■□□□□ 0.87
FAM228B-208ENST00000613899 ASIC5Q9NY37 505 aa20.46■□□□□ 0.87
FAM228B-208ENST00000613899 NOP53Q9NZM5 478 aaKnown RBP20.46■□□□□ 0.87
FAM228B-208ENST00000613899 NDRG3Q9UGV2 375 aa20.46■□□□□ 0.87
FAM228B-208ENST00000613899 ABCA4P78363 2273 aa20.46■□□□□ 0.87
FAM228B-208ENST00000613899 C7orf72A4D263 438 aa20.45■□□□□ 0.86
FAM228B-208ENST00000613899 SHISA8B8ZZ34 492 aa20.45■□□□□ 0.86
FAM228B-208ENST00000613899 BIRC5O15392 142 aa20.45■□□□□ 0.86
FAM228B-208ENST00000613899 SNUPNO95149 360 aaKnown RBP20.45■□□□□ 0.86
FAM228B-208ENST00000613899 C6orf47O95873 294 aa20.45■□□□□ 0.86
FAM228B-208ENST00000613899 G6PDP11413 515 aa20.45■□□□□ 0.86
FAM228B-208ENST00000613899 C21orf58P58505 322 aa20.45■□□□□ 0.86
FAM228B-208ENST00000613899 EMX2Q04743 252 aa20.45■□□□□ 0.86
FAM228B-208ENST00000613899 CHI3L2Q15782 390 aa20.45■□□□□ 0.86
FAM228B-208ENST00000613899 GGNQ86UU5 652 aa20.45■□□□□ 0.86
FAM228B-208ENST00000613899 WDR75Q8IWA0 830 aaKnown RBP20.45■□□□□ 0.86
FAM228B-208ENST00000613899 RIMKLAQ8IXN7 391 aa20.45■□□□□ 0.86
FAM228B-208ENST00000613899 KIRREL3Q8IZU9 778 aa20.45■□□□□ 0.86
FAM228B-208ENST00000613899 ZNF527Q8NB42 609 aa20.45■□□□□ 0.86
FAM228B-208ENST00000613899 ADAMTS15Q8TE58 950 aa20.45■□□□□ 0.86
FAM228B-208ENST00000613899 PGM2Q96G03 612 aa20.45■□□□□ 0.86
FAM228B-208ENST00000613899 ZNF845Q96IR2 970 aaPredicted RBP20.45■□□□□ 0.86
FAM228B-208ENST00000613899 DUSP26Q9BV47 211 aa20.45■□□□□ 0.86
FAM228B-208ENST00000613899 CXXC4Q9H2H0 198 aa20.45■□□□□ 0.86
FAM228B-208ENST00000613899 LIME1Q9H400 295 aa20.45■□□□□ 0.86
FAM228B-208ENST00000613899 NUP214P35658 2090 aaPredicted RBP20.45■□□□□ 0.86
FAM228B-208ENST00000613899 WDR91A4D1P6 747 aa20.44■□□□□ 0.86
FAM228B-208ENST00000613899 EIF1AYO14602 144 aaKnown RBP20.44■□□□□ 0.86
FAM228B-208ENST00000613899 CFLARO15519 480 aa20.44■□□□□ 0.86
FAM228B-208ENST00000613899 ZNF500O60304 480 aaPredicted RBP20.44■□□□□ 0.86
FAM228B-208ENST00000613899 KIR2DL2P43627 348 aaPredicted RBP20.44■□□□□ 0.86
FAM228B-208ENST00000613899 ABCE1P61221 599 aaKnown RBP20.44■□□□□ 0.86
FAM228B-208ENST00000613899 SIRPAP78324 504 aa20.44■□□□□ 0.86
FAM228B-208ENST00000613899 PDCD2Q16342 344 aaPredicted RBP20.44■□□□□ 0.86
FAM228B-208ENST00000613899 PLPPR5Q32ZL2 321 aa20.44■□□□□ 0.86
FAM228B-208ENST00000613899 BHLHB9Q6PI77 547 aa20.44■□□□□ 0.86
FAM228B-208ENST00000613899 PAMR1Q6UXH9 720 aa20.44■□□□□ 0.86
FAM228B-208ENST00000613899 CAMKMTQ7Z624 323 aa20.44■□□□□ 0.86
FAM228B-208ENST00000613899 MTERF4Q7Z6M4 381 aaKnown RBP20.44■□□□□ 0.86
FAM228B-208ENST00000613899 SH3YL1Q96HL8 342 aaPredicted RBP20.44■□□□□ 0.86
FAM228B-208ENST00000613899 HOXD1Q9GZZ0 328 aa20.44■□□□□ 0.86
FAM228B-208ENST00000613899 MED17Q9NVC6 651 aa20.44■□□□□ 0.86
FAM228B-208ENST00000613899 GPATCH2Q9NW75 528 aa20.44■□□□□ 0.86
FAM228B-208ENST00000613899 PLEKHA6Q9Y2H5 1048 aa20.44■□□□□ 0.86
FAM228B-208ENST00000613899 CASKO14936 926 aa20.43■□□□□ 0.86
FAM228B-208ENST00000613899 ITM2AO43736 263 aa20.43■□□□□ 0.86
FAM228B-208ENST00000613899 MYZAPP0CAP1 466 aa20.43■□□□□ 0.86
FAM228B-208ENST00000613899 ME2P23368 584 aa20.43■□□□□ 0.86
FAM228B-208ENST00000613899 EIF1AXP47813 144 aaKnown RBP20.43■□□□□ 0.86
FAM228B-208ENST00000613899 CLDN8P56748 225 aa20.43■□□□□ 0.86
FAM228B-208ENST00000613899 CD226Q15762 336 aa20.43■□□□□ 0.86
FAM228B-208ENST00000613899 DCST2Q5T1A1 773 aa20.43■□□□□ 0.86
FAM228B-208ENST00000613899 BTLAQ7Z6A9 289 aa20.43■□□□□ 0.86
FAM228B-208ENST00000613899 ZNF781Q8N8C0 355 aa20.43■□□□□ 0.86
FAM228B-208ENST00000613899 CHDHQ8NE62 594 aaPredicted RBP20.43■□□□□ 0.86
FAM228B-208ENST00000613899 B4GALNT2Q8NHY0 566 aa20.43■□□□□ 0.86
FAM228B-208ENST00000613899 RAP2CQ9Y3L5 183 aa20.43■□□□□ 0.86
FAM228B-208ENST00000613899 TESMINQ9Y4I5 508 aa20.43■□□□□ 0.86
FAM228B-208ENST00000613899 H3BNH8 94 aa20.42■□□□□ 0.86
FAM228B-208ENST00000613899 RAF1P04049 648 aa20.42■□□□□ 0.86
FAM228B-208ENST00000613899 HRGP04196 525 aa20.42■□□□□ 0.86
FAM228B-208ENST00000613899 DHRS4L1P0CG22 281 aa20.42■□□□□ 0.86
FAM228B-208ENST00000613899 CD8BP10966 210 aa20.42■□□□□ 0.86
FAM228B-208ENST00000613899 SOAT1P35610 550 aa20.42■□□□□ 0.86
FAM228B-208ENST00000613899 CD79BP40259 229 aa20.42■□□□□ 0.86
FAM228B-208ENST00000613899 RAC1P63000 192 aa20.42■□□□□ 0.86
FAM228B-208ENST00000613899 PPP4R4Q6NUP7 873 aa20.42■□□□□ 0.86
FAM228B-208ENST00000613899 FAM214BQ7L5A3 538 aa20.42■□□□□ 0.86
FAM228B-208ENST00000613899 CROCCP2Q86T23 111 aa20.42■□□□□ 0.86
FAM228B-208ENST00000613899 PHOSPHO1Q8TCT1 267 aa20.42■□□□□ 0.86
FAM228B-208ENST00000613899 RNF145Q96MT1 663 aa20.42■□□□□ 0.86
FAM228B-208ENST00000613899 ALPK1Q96QP1 1244 aa20.42■□□□□ 0.86
FAM228B-208ENST00000613899 SLC39A3Q9BRY0 314 aa20.42■□□□□ 0.86
FAM228B-208ENST00000613899 PRRG4Q9BZD6 226 aa20.42■□□□□ 0.86
FAM228B-208ENST00000613899 OPN3Q9H1Y3 402 aaPredicted RBP20.42■□□□□ 0.86
FAM228B-208ENST00000613899 CENPHQ9H3R5 247 aa20.42■□□□□ 0.86
FAM228B-208ENST00000613899 ELOVL5Q9NYP7 299 aa20.42■□□□□ 0.86
FAM228B-208ENST00000613899 RAB21Q9UL25 225 aa20.42■□□□□ 0.86
FAM228B-208ENST00000613899 MCTS1Q9ULC4 181 aaKnown RBP20.42■□□□□ 0.86
FAM228B-208ENST00000613899 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.42■□□□□ 0.86
FAM228B-208ENST00000613899 ACTL7BQ9Y614 415 aa20.42■□□□□ 0.86
FAM228B-208ENST00000613899 ITPR3Q14573 2671 aa20.41■□□□□ 0.86
FAM228B-208ENST00000613899 PRRC2AP48634 2157 aaKnown RBP20.41■□□□□ 0.86
FAM228B-208ENST00000613899 UQCRHLA0A096LP55 91 aa20.41■□□□□ 0.86
FAM228B-208ENST00000613899 POU2F1P14859 743 aa20.41■□□□□ 0.86
FAM228B-208ENST00000613899 PSMA4P25789 261 aaKnown RBP20.41■□□□□ 0.86
FAM228B-208ENST00000613899 EIF1P41567 113 aaKnown RBP20.41■□□□□ 0.86
FAM228B-208ENST00000613899 SUMO3P55854 103 aaPredicted RBP20.41■□□□□ 0.86
FAM228B-208ENST00000613899 RIPPLY3P57055 190 aa20.41■□□□□ 0.86
FAM228B-208ENST00000613899 HBA1P69905 142 aa20.41■□□□□ 0.86
FAM228B-208ENST00000613899 FAM27E3Q08E93 113 aa20.41■□□□□ 0.86
FAM228B-208ENST00000613899 GUSBP1Q15486 140 aa20.41■□□□□ 0.86
FAM228B-208ENST00000613899 PGS1Q32NB8 556 aa20.41■□□□□ 0.86
FAM228B-208ENST00000613899 CEP85LQ5SZL2 805 aa20.41■□□□□ 0.86
FAM228B-208ENST00000613899 ZNF474Q6S9Z5 364 aaPredicted RBP20.41■□□□□ 0.86
FAM228B-208ENST00000613899 ESPNLQ6ZVH7 1005 aa20.41■□□□□ 0.86
FAM228B-208ENST00000613899 OR10D3Q8NH80 312 aa20.41■□□□□ 0.86
FAM228B-208ENST00000613899 OR5AK3PQ8NH89 298 aa20.41■□□□□ 0.86
FAM228B-208ENST00000613899 NUDT8Q8WV74 236 aa20.41■□□□□ 0.86
FAM228B-208ENST00000613899 MBD6Q96DN6 1003 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms