RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 SLC44A5Q8NCS7 719 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 RAI2Q9Y5P3 530 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 TCRBV7S3A2A0A539 114 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 EEF1E1-BLOC1S5C9J1V9 151 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 SYT7O43581 403 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 STBD1O95210 358 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF20P17024 532 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 SGCAQ16586 387 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 OR5M3Q8NGP4 307 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 MITD1Q8WV92 249 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 RNF170Q96K19 258 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 ZDHHC15Q96MV8 337 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 VAMP8Q9BV40 100 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 FAM166BA8MTA8 275 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 SMAD6O43541 496 aaKnown RBP4.68□□□□□ -1.66
VPS13D-213ENST00000613099 ARP10275 920 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 DAOP14920 347 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 BPIP17213 487 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 AHCYP23526 432 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 ARL6IP1Q15041 203 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 UNQ6126/PRO20091Q6UXV3 157 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 GOLGA7Q7Z5G4 137 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 PTRH1Q86Y79 214 aaKnown RBP4.68□□□□□ -1.66
VPS13D-213ENST00000613099 CREB3L4Q8TEY5 395 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 PHYHIPQ92561 330 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 PTGES2Q9H7Z7 377 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 APMAPQ9HDC9 416 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 CCSO14618 274 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 ADAMTS4O75173 837 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 FGF1P05230 155 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 GDF10P55107 478 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 ISL1P61371 349 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 PRR27Q6MZM9 219 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 TMEM130Q8N3G9 435 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 MYOCQ99972 504 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 SLCO5A1Q9H2Y9 848 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 PITPNC1Q9UKF7 332 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 MBTPS2O43462 519 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 OR6A2O95222 327 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 PMS2P2O95744 297 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 OR8U8P0C7N1 319 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 GGT5P36269 586 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 RCAN2Q14206 197 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 PDIA6Q15084 440 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 SLC9A3R2Q15599 337 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 ACOT6Q3I5F7 207 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-213ENST00000613099 C9orf64Q5T6V5 341 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 NSUN5P2Q63ZY6 315 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 NIPAL3Q6P499 406 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 GLT6D1Q7Z4J2 308 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 MAP4K3Q8IVH8 894 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 OR8U1Q8NH10 309 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 LRRN4Q8WUT4 740 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 FAM3CQ92520 227 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 RPL10LQ96L21 214 aaKnown RBP4.68□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF354BQ96LW1 612 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 HSD17B14Q9BPX1 270 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 MACROD1Q9BQ69 325 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 TAS2R5Q9NYW4 299 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 EXOGQ9Y2C4 368 aaKnown RBP4.68□□□□□ -1.66
VPS13D-213ENST00000613099 ICE1Q9Y2F5 2266 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 DICER1Q9UPY3 1922 aaKnown RBP4.68□□□□□ -1.66
VPS13D-213ENST00000613099 OR5H14A6NHG9 310 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 TMEM200CA6NKL6 621 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 B4E171 279 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 TGFB1I1O43294 461 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 TSPAN3O60637 253 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 JTBO76095 146 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 GABRR1P24046 479 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 SHMT2P34897 504 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 FXYD6P3P58550 94 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 XKR6Q5GH73 641 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 ASPGQ86U10 573 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 OR52N2Q8NGI0 321 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 WNT8BQ93098 351 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 RASD2Q96D21 266 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 KCNH6Q9H252 994 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 NRP1O14786 923 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 HLA-DQA2P01906 255 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 IL5P05113 134 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF30P17039 623 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 WNT3AP56704 352 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 CDK6Q00534 326 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 CHIT1Q13231 466 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 SLC10A1Q14973 349 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 OR56A3Q8NH54 315 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 RAET1EQ8TD07 263 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF599Q96NL3 588 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 SEC11CQ9BY50 192 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 FBXO44Q9H4M3 255 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 DMAC2Q9NW81 257 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 OTOFQ9HC10 1997 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 TCRBV21S2A2A0A5A6 115 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 G3V2L1 256 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 SCAMP3O14828 347 aaKnown RBP4.68□□□□□ -1.66
VPS13D-213ENST00000613099 HNRNPA3P51991 378 aaKnown RBP4.68□□□□□ -1.66
VPS13D-213ENST00000613099 GALNTL5Q7Z4T8 443 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 FRMD1Q8N878 549 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 TSSK3Q96PN8 268 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 PADI1Q9ULC6 663 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms