RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 C12orf29Q8N999 325 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 SORT1Q99523 831 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 PIGVQ9NUD9 493 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 SOHLH2Q9NX45 425 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 GP1BBP13224 206 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 ZNF44P15621 663 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 FDXRP22570 491 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 TPPP2P59282 170 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 SELENOWP63302 87 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 TRAM1L1Q8N609 369 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 MFSD9Q8NBP5 474 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 OR52N2Q8NGI0 321 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 OR5M3Q8NGP4 307 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 BSCL2Q96G97 398 aaPredicted RBP8.3□□□□□ -1.08
TTC28-208ENST00000612946 HDHD5Q9BXW7 423 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 PRODH2Q9UF12 536 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 ZNF26P17031 533 aaPredicted RBP8.3□□□□□ -1.08
TTC28-208ENST00000612946 ZNF136P52737 540 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 CSNK2A1P68400 391 aaPredicted RBP8.3□□□□□ -1.08
TTC28-208ENST00000612946 ANKRD16Q6P6B7 361 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 TMPRSS7Q7RTY8 843 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 PIWIL3Q7Z3Z3 882 aaKnown RBP8.3□□□□□ -1.08
TTC28-208ENST00000612946 PLEKHH3Q7Z736 793 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 VGLL2Q8N8G2 317 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 CSNK2A3Q8NEV1 391 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 SLC2A12Q8TD20 617 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 BCL7CQ8WUZ0 217 aaPredicted RBP8.3□□□□□ -1.08
TTC28-208ENST00000612946 FBXL18Q96ME1 805 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 SORCS2Q96PQ0 1159 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 OSGIN1Q9UJX0 560 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 ZBTB7AO95365 584 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 TACR2P21452 398 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 ADGRA1Q86SQ6 560 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 SYNPRQ8TBG9 265 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 ADAMTS18Q8TE60 1221 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 MCHR1Q99705 422 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 TRAF4Q9BUZ4 470 aaPredicted RBP8.3□□□□□ -1.08
TTC28-208ENST00000612946 PSORS1C1Q9UIG5 152 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 PUS1Q9Y606 427 aaKnown RBP eCLIP8.3□□□□□ -1.08
TTC28-208ENST00000612946 AKAP11Q9UKA4 1901 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 ADORA3P0DMS8 318 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 ARL2P36404 184 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 MGAT3Q09327 533 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 PDSS1Q5T2R2 415 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 NAA40Q86UY6 237 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 NRIP3Q9NQ35 241 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 C6orf47O95873 294 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 MT-ND4P03905 459 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 RAC2P15153 192 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 CNR2P34972 360 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 PCBP2Q15366 365 aaKnown RBP eCLIP8.3□□□□□ -1.084e-6■■■■■ 28.4
TTC28-208ENST00000612946 TAF1CQ15572 869 aaPredicted RBP8.3□□□□□ -1.08
TTC28-208ENST00000612946 PHYHD1Q5SRE7 291 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 ARHGAP40Q5TG30 622 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 CLEC9AQ6UXN8 241 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 MIB2Q96AX9 1013 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 WDR18Q9BV38 432 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 POLDIP3Q9BY77 421 aaKnown RBP8.3□□□□□ -1.08
TTC28-208ENST00000612946 SOX17Q9H6I2 414 aaPredicted RBP8.3□□□□□ -1.08
TTC28-208ENST00000612946 ACKR4Q9NPB9 350 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 TRIOBPQ9H2D6 2365 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 C2orf78A6NCI8 922 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 F6UZH7 168 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 TRAF3IP2O43734 574 aaPredicted RBP8.3□□□□□ -1.08
TTC28-208ENST00000612946 CAPNS1P04632 268 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 RPL13AP40429 203 aaKnown RBP8.3□□□□□ -1.08
TTC28-208ENST00000612946 PSMB3P49720 205 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 AAK1Q2M2I8 961 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 ISL2Q96A47 359 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 TM6SF2Q9BZW4 377 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 SPATC1LQ9H0A9 340 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 NDUFB11Q9NX14 153 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 NPIPA5A0A0B4J1W7 369 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 TMEM129A0AVI4 362 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 HOXC11O43248 304 aaPredicted RBP8.3□□□□□ -1.08
TTC28-208ENST00000612946 OR2T1O43869 369 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 FUT4P22083 530 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 CPOXP36551 454 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 HEPHL1Q6MZM0 1159 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 OPN5Q6U736 354 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 GPR155Q7Z3F1 870 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 NKAIN3Q8N8D7 197 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 TMEM102Q8N9M5 508 aaPredicted RBP8.3□□□□□ -1.08
TTC28-208ENST00000612946 THEM6Q8WUY1 208 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 LINC01599Q8WXQ3 324 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 PRRC1Q96M27 445 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 OR7D2Q96RA2 312 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 KLHL42Q9P2K6 505 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 V9GY05 133 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 A0A1B0GUL6 1792 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 HLA-DOBP13765 273 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 PFKLP17858 780 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 CLCNKBP51801 687 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 PSPHP78330 225 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 INCA1Q0VD86 236 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 SPRED3Q2MJR0 410 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 GFOD2Q3B7J2 385 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 CHADLQ6NUI6 762 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 ZNF695Q8IW36 515 aa8.3□□□□□ -1.08
TTC28-208ENST00000612946 SLC5A8Q8N695 610 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms