RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 ATP12AP54707 1039 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 SUMO3P55854 103 aaPredicted RBP11.17□□□□□ -0.62
CBWD3-208ENST00000612050 FGFBP1Q14512 234 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 PDCD4Q53EL6 469 aaKnown RBP11.17□□□□□ -0.62
CBWD3-208ENST00000612050 DCST1Q5T197 706 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 PPP4R4Q6NUP7 873 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 TMCO5AQ8N6Q1 288 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 TOR1AIP2Q8NFQ8 470 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 TNIP2Q8NFZ5 429 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 OIT3Q8WWZ8 545 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 SH3YL1Q96HL8 342 aaPredicted RBP11.17□□□□□ -0.62
CBWD3-208ENST00000612050 C7orf26Q96N11 449 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 TUBA1CQ9BQE3 449 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 ZNF559Q9BR84 538 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 SLC35A5Q9BS91 424 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 SFXN3Q9BWM7 321 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 ENKD1Q9H0I2 346 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 GPATCH2Q9NW75 528 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 PCNX1Q96RV3 2341 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 CACNA1CQ13936 2221 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 OR2M5A3KFT3 312 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 SLC22A20A6NK97 555 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 GJE1A6NN92 205 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 RFXANKO14593 260 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 ZIC3O60481 467 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 KRT75O95678 551 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 STARP49675 285 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 P2RX1P51575 399 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 UFM1P61960 85 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 PPP2R2AP63151 447 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 GNA13Q14344 377 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 CDSNQ15517 529 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 ZNF621Q6ZSS3 439 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 MIER2Q8N344 545 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 OR5D16Q8NGK9 328 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 XAGE5Q8WWM1 108 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 C14orf79Q96F83 325 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 REXO5Q96IC2 774 aaKnown RBP11.16□□□□□ -0.62
CBWD3-208ENST00000612050 CCDC115Q96NT0 180 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 OR51I1Q9H343 314 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 PIGMQ9H3S5 423 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 TIGARQ9NQ88 270 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 POLE3Q9NRF9 147 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 ZIM2Q9NZV7 527 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 KCNN3Q9UGI6 736 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 DTNAQ9Y4J8 743 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 USH1CQ9Y6N9 552 aa11.16□□□□□ -0.62
CBWD3-208ENST00000612050 CCDC154A6NI56 674 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 C19orf84I3L1E1 186 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 TNFRSF21O75509 655 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 RCBTB2O95199 551 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 SYNGR4O95473 234 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 PLGP00747 810 aaPredicted RBP11.15□□□□□ -0.62
CBWD3-208ENST00000612050 CRHP06850 196 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 ALDOCP09972 364 aaKnown RBP11.15□□□□□ -0.62
CBWD3-208ENST00000612050 UBL4AP11441 157 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 CCR4P51679 360 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 CLDN18P56856 261 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 IRX1P78414 480 aaPredicted RBP11.15□□□□□ -0.62
CBWD3-208ENST00000612050 CBFBQ13951 182 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 GPR68Q15743 365 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 ARHGAP11BQ3KRB8 267 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 GPAT3Q53EU6 434 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 GTF2IRD2BQ6EKJ0 949 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 ARSKQ6UWY0 536 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 MSANTD1Q6ZTZ1 278 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 GTF2IRD2Q86UP8 949 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 CHDHQ8NE62 594 aaPredicted RBP11.15□□□□□ -0.62
CBWD3-208ENST00000612050 MIPOL1Q8TD10 442 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 RNASE6Q93091 150 aaKnown RBP11.15□□□□□ -0.62
CBWD3-208ENST00000612050 ITCHQ96J02 903 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 MAELQ96JY0 434 aaKnown RBP11.15□□□□□ -0.62
CBWD3-208ENST00000612050 UCN2Q96RP3 112 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 SDF2Q99470 211 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 PINK1Q9BXM7 581 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 NMUR2Q9GZQ4 415 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 FANCFQ9NPI8 374 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 TCF7L2Q9NQB0 619 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 MCTS1Q9ULC4 181 aaKnown RBP11.15□□□□□ -0.62
CBWD3-208ENST00000612050 EDARQ9UNE0 448 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 LIPT1Q9Y234 373 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 ZNF337Q9Y3M9 751 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 WDR45Q9Y484 360 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 GPR45Q9Y5Y3 372 aa11.15□□□□□ -0.62
CBWD3-208ENST00000612050 GPC6Q9Y625 555 aaPredicted RBP11.15□□□□□ -0.62
CBWD3-208ENST00000612050 HCFC1P51610 2035 aa11.14□□□□□ -0.63
CBWD3-208ENST00000612050 C7orf72A4D263 438 aa11.14□□□□□ -0.63
CBWD3-208ENST00000612050 EIF1AYO14602 144 aaKnown RBP11.14□□□□□ -0.63
CBWD3-208ENST00000612050 ANKRD28O15084 1053 aa11.14□□□□□ -0.63
CBWD3-208ENST00000612050 ZNF264O43296 627 aa11.14□□□□□ -0.63
CBWD3-208ENST00000612050 EIF4E2O60573 245 aaKnown RBP11.14□□□□□ -0.63
CBWD3-208ENST00000612050 CYP7B1O75881 506 aa11.14□□□□□ -0.63
CBWD3-208ENST00000612050 OR12D1P0DN82 309 aa11.14□□□□□ -0.63
CBWD3-208ENST00000612050 CAPN3P20807 821 aa11.14□□□□□ -0.63
CBWD3-208ENST00000612050 MAGEA8P43361 318 aa11.14□□□□□ -0.63
CBWD3-208ENST00000612050 KIR2DL3P43628 341 aa11.14□□□□□ -0.63
CBWD3-208ENST00000612050 WNT3P56703 355 aa11.14□□□□□ -0.63
CBWD3-208ENST00000612050 RPS26P62854 115 aaKnown RBP11.14□□□□□ -0.63
CBWD3-208ENST00000612050 TLE4Q04727 773 aa11.14□□□□□ -0.63
CBWD3-208ENST00000612050 HSP90B2PQ58FF3 399 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms