RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 COX20Q5RI15 118 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 GCNT6Q5T4J0 391 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 ZNF691Q5VV52 312 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 HLA-DQA1Q5Y7H0 255 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 KDM4DQ6B0I6 523 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 ZNF773Q6PK81 442 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 FAM111BQ6SJ93 734 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 GPR141Q7Z602 305 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 GALNT10Q86SR1 603 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 CYP4Z1Q86W10 505 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 GPALPP1Q8IXQ4 340 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 SLC15A4Q8N697 577 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 ZNF615Q8N8J6 731 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 CHDHQ8NE62 594 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-217ENST00000611848 PIK3C3Q8NEB9 887 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 OR9A2Q8NGT5 310 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 MARVELD3Q96A59 401 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 ZBED6CLQ96FA7 236 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-217ENST00000611848 AMDHD1Q96NU7 426 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 TUBA1CQ9BQE3 449 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 SLC35A5Q9BS91 424 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 DOHHQ9BU89 302 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 RAD21L1Q9H4I0 556 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 ACSS1Q9NUB1 689 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-217ENST00000611848 ADPRHL2Q9NX46 363 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 LRFN1Q9P244 771 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 PRODH2Q9UF12 536 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 PCDHGB6Q9Y5F9 930 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 ORC6Q9Y5N6 252 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 CSAG2Q9Y5P2 127 aa8.14□□□□□ -1.11
SMAD4-217ENST00000611848 EML6Q6ZMW3 1958 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 NINQ8N4C6 2090 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 ZGRF1Q86YA3 2104 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 A0A087WV62 115 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 CCDC160A6NGH7 325 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 TTLL8A6PVC2 850 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 A8MVJ9 347 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 E9PQ18 207 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 WWP2O00308 870 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 PRAMEF2O60811 474 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 OR2J2O76002 312 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 KRT75O95678 551 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 CBX7O95931 251 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 F10P00742 488 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 ETFAP13804 333 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 UQCRC2P22695 453 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 CRHBPP24387 322 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 SOX18P35713 384 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 FRKP42685 505 aaPredicted RBP8.13□□□□□ -1.11
SMAD4-217ENST00000611848 CRATP43155 626 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 DAPP51397 102 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 ARHGDIAP52565 204 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 MANFP55145 182 aaKnown RBP8.13□□□□□ -1.11
SMAD4-217ENST00000611848 GABARAPL2P60520 117 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 DCAF7P61962 342 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 SELENOWP63302 87 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 DYNC1I2Q13409 638 aaKnown RBP8.13□□□□□ -1.11
SMAD4-217ENST00000611848 TOP3AQ13472 1001 aaPredicted RBP8.13□□□□□ -1.11
SMAD4-217ENST00000611848 MLC1Q15049 377 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 OR1C1Q15619 314 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 LTB4RQ15722 352 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 C6orf141Q5SZD1 244 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 LAIR2Q6ISS4 152 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 RPUSD3Q6P087 351 aaKnown RBP8.13□□□□□ -1.11
SMAD4-217ENST00000611848 FAHD1Q6P587 224 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 OPN5Q6U736 354 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 TSEN54Q7Z6J9 526 aaKnown RBP8.13□□□□□ -1.11
SMAD4-217ENST00000611848 ERI1Q8IV48 349 aaKnown RBP8.13□□□□□ -1.11
SMAD4-217ENST00000611848 TAGAPQ8N103 731 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 Q8NA96 180 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 MDS2Q8NDY4 140 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 C17orf47Q8NEP4 570 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 C16orf52Q8NHV5 167 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 SLC22A8Q8TCC7 542 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 ASB15Q8WXK1 588 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 KAT2AQ92830 837 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 MAL2Q969L2 176 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 TP53INP1Q96A56 240 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 MPP4Q96JB8 637 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 RASL10BQ96S79 203 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 BARD1Q99728 777 aaKnown RBP8.13□□□□□ -1.11
SMAD4-217ENST00000611848 WWTR1Q9GZV5 400 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 LIN28AQ9H9Z2 209 aaKnown RBP8.13□□□□□ -1.11
SMAD4-217ENST00000611848 HPF1Q9NWY4 346 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 BAG5Q9UL15 447 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 HSPE1-MOB4S4R3N1 261 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 U3KQV3 271 aa8.13□□□□□ -1.11
SMAD4-217ENST00000611848 PRRC2CQ9Y520 2896 aaKnown RBP8.12□□□□□ -1.11
SMAD4-217ENST00000611848 SHANK1Q9Y566 2161 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 FASNP49327 2511 aaKnown RBP8.12□□□□□ -1.11
SMAD4-217ENST00000611848 hCG_2039718K7EN88 272 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 COQ9O75208 318 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 UGT2B11O75310 529 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 NEURL1O76050 574 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 ARAFP10398 606 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 IGFBP5P24593 272 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 PCSK6P29122 969 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 GPC1P35052 558 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 POLR2IP36954 125 aaKnown RBP8.12□□□□□ -1.11
SMAD4-217ENST00000611848 YAP1P46937 504 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms