RNA–Protein interactions for RNA: ENST00000608674.5

TOM1-218, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-218ENST00000608674 NEUROD4Q9HD90 331 aa11.92□□□□□ -0.5
TOM1-218ENST00000608674 SSU72Q9NP77 194 aaKnown RBP11.92□□□□□ -0.5
TOM1-218ENST00000608674 KCNK9Q9NPC2 374 aa11.92□□□□□ -0.5
TOM1-218ENST00000608674 SIRT3Q9NTG7 399 aaPredicted RBP11.92□□□□□ -0.5
TOM1-218ENST00000608674 GIN1Q9NXP7 522 aa11.92□□□□□ -0.5
TOM1-218ENST00000608674 NOP53Q9NZM5 478 aaKnown RBP11.92□□□□□ -0.5
TOM1-218ENST00000608674 ST6GALNAC2Q9UJ37 374 aa11.92□□□□□ -0.5
TOM1-218ENST00000608674 SH3D21A4FU49 640 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 H3BNH8 94 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 EIF1AYO14602 144 aaKnown RBP11.91□□□□□ -0.5
TOM1-218ENST00000608674 TM9SF1O15321 606 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 ITM2AO43736 263 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 ZNF500O60304 480 aaPredicted RBP11.91□□□□□ -0.5
TOM1-218ENST00000608674 SNUPNO95149 360 aaKnown RBP11.91□□□□□ -0.5
TOM1-218ENST00000608674 GOSR1O95249 250 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 G6PDP11413 515 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 FCGR2AP12318 317 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 ME2P23368 584 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 SOAT1P35610 550 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 EIF1AXP47813 144 aaKnown RBP11.91□□□□□ -0.5
TOM1-218ENST00000608674 KCNJ5P48544 419 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 OCRLQ01968 901 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 SMU1Q2TAY7 513 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 CEP85LQ5SZL2 805 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 CDC73Q6P1J9 531 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 CROCCP2Q86T23 111 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 MED12LQ86YW9 2145 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 KIRREL3Q8IZU9 778 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 GTPBP8Q8N3Z3 284 aaPredicted RBP11.91□□□□□ -0.5
TOM1-218ENST00000608674 METTL25Q8N6Q8 603 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 B4GALNT2Q8NHY0 566 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 PSMA8Q8TAA3 256 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 SFXN5Q8TD22 340 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 ACTRT2Q8TDY3 377 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 NUDT8Q8WV74 236 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 ZBTB8AQ96BR9 441 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 STARD4Q96DR4 205 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 PGM2Q96G03 612 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 ZNF845Q96IR2 970 aaPredicted RBP11.91□□□□□ -0.5
TOM1-218ENST00000608674 PPP1R36Q96LQ0 422 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 LIME1Q9H400 295 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 CXorf36Q9H7Y0 433 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 CCM2LQ9NUG4 571 aaPredicted RBP11.91□□□□□ -0.5
TOM1-218ENST00000608674 MED17Q9NVC6 651 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 FBXO34Q9NWN3 711 aa11.91□□□□□ -0.5
TOM1-218ENST00000608674 A0A1W2PQD3 144 aa11.9□□□□□ -0.5
TOM1-218ENST00000608674 GTPBP1O00178 669 aaKnown RBP11.9□□□□□ -0.5
TOM1-218ENST00000608674 SYNGR4O95473 234 aa11.9□□□□□ -0.5
TOM1-218ENST00000608674 NUDT14O95848 222 aa11.9□□□□□ -0.5
TOM1-218ENST00000608674 PLGP00747 810 aaPredicted RBP11.9□□□□□ -0.5
TOM1-218ENST00000608674 TUBBP07437 444 aa11.9□□□□□ -0.5
TOM1-218ENST00000608674 KIR2DL2P43627 348 aaPredicted RBP11.9□□□□□ -0.5
TOM1-218ENST00000608674 PRRC2AP48634 2157 aaKnown RBP11.9□□□□□ -0.5
TOM1-218ENST00000608674 RPL14P50914 215 aaKnown RBP11.9□□□□□ -0.5
TOM1-218ENST00000608674 CLDN8P56748 225 aa11.9□□□□□ -0.5
TOM1-218ENST00000608674 TMEM44Q2T9K0 475 aa11.9□□□□□ -0.5
TOM1-218ENST00000608674 EXOSC6Q5RKV6 272 aaKnown RBP11.9□□□□□ -0.5
TOM1-218ENST00000608674 DCST2Q5T1A1 773 aa11.9□□□□□ -0.5
TOM1-218ENST00000608674 PDSS1Q5T2R2 415 aa11.9□□□□□ -0.5
TOM1-218ENST00000608674 VWA1Q6PCB0 445 aa11.9□□□□□ -0.5
TOM1-218ENST00000608674 BTLAQ7Z6A9 289 aa11.9□□□□□ -0.5
TOM1-218ENST00000608674 MTERF4Q7Z6M4 381 aaKnown RBP11.9□□□□□ -0.5
TOM1-218ENST00000608674 RIMKLAQ8IXN7 391 aa11.9□□□□□ -0.5
TOM1-218ENST00000608674 ZNF781Q8N8C0 355 aa11.9□□□□□ -0.5
TOM1-218ENST00000608674 CHDHQ8NE62 594 aaPredicted RBP11.9□□□□□ -0.5
TOM1-218ENST00000608674 OR5AK3PQ8NH89 298 aa11.9□□□□□ -0.5
TOM1-218ENST00000608674 PHOSPHO1Q8TCT1 267 aa11.9□□□□□ -0.5
TOM1-218ENST00000608674 PAIP2Q9BPZ3 127 aaKnown RBP11.9□□□□□ -0.5
TOM1-218ENST00000608674 OPN3Q9H1Y3 402 aaPredicted RBP11.9□□□□□ -0.5
TOM1-218ENST00000608674 AKTIPQ9H8T0 292 aa11.9□□□□□ -0.5
TOM1-218ENST00000608674 RNF122Q9H9V4 155 aa11.9□□□□□ -0.5
TOM1-218ENST00000608674 PAQR5Q9NXK6 330 aaPredicted RBP11.9□□□□□ -0.5
TOM1-218ENST00000608674 ASIC5Q9NY37 505 aa11.9□□□□□ -0.5
TOM1-218ENST00000608674 MCTS1Q9ULC4 181 aaKnown RBP11.9□□□□□ -0.5
TOM1-218ENST00000608674 PCDHGB4Q9UN71 923 aa11.9□□□□□ -0.5
TOM1-218ENST00000608674 PLEKHA6Q9Y2H5 1048 aa11.9□□□□□ -0.5
TOM1-218ENST00000608674 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.9□□□□□ -0.5
TOM1-218ENST00000608674 EMC9Q9Y3B6 208 aa11.9□□□□□ -0.5
TOM1-218ENST00000608674 RAP2CQ9Y3L5 183 aa11.9□□□□□ -0.5
TOM1-218ENST00000608674 MED13LQ71F56 2210 aa11.9□□□□□ -0.51
TOM1-218ENST00000608674 ACANP16112 2415 aa11.89□□□□□ -0.51
TOM1-218ENST00000608674 C7orf72A4D263 438 aa11.89□□□□□ -0.51
TOM1-218ENST00000608674 OPN1LWP04000 364 aa11.89□□□□□ -0.51
TOM1-218ENST00000608674 CD79BP40259 229 aa11.89□□□□□ -0.51
TOM1-218ENST00000608674 EIF1P41567 113 aaKnown RBP11.89□□□□□ -0.51
TOM1-218ENST00000608674 SLC1A6P48664 564 aa11.89□□□□□ -0.51
TOM1-218ENST00000608674 CTBP2P56545 445 aa11.89□□□□□ -0.51
TOM1-218ENST00000608674 C21orf58P58505 322 aa11.89□□□□□ -0.51
TOM1-218ENST00000608674 RAC1P63000 192 aa11.89□□□□□ -0.51
TOM1-218ENST00000608674 FAM27E3Q08E93 113 aa11.89□□□□□ -0.51
TOM1-218ENST00000608674 CD226Q15762 336 aa11.89□□□□□ -0.51
TOM1-218ENST00000608674 PLPPR5Q32ZL2 321 aa11.89□□□□□ -0.51
TOM1-218ENST00000608674 ZNF614Q8N883 585 aa11.89□□□□□ -0.51
TOM1-218ENST00000608674 VPS37AQ8NEZ2 397 aa11.89□□□□□ -0.51
TOM1-218ENST00000608674 OR10D3Q8NH80 312 aa11.89□□□□□ -0.51
TOM1-218ENST00000608674 ZBTB9Q96C00 473 aa11.89□□□□□ -0.51
TOM1-218ENST00000608674 RNF145Q96MT1 663 aa11.89□□□□□ -0.51
TOM1-218ENST00000608674 FOXC2Q99958 501 aa11.89□□□□□ -0.51
TOM1-218ENST00000608674 MED18Q9BUE0 208 aa11.89□□□□□ -0.51
TOM1-218ENST00000608674 DPY30Q9C005 99 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms