RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 SLC35A3Q9Y2D2 325 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 PRRG2O14669 202 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 BCKDKO14874 412 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 ZNF264O43296 627 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 HCRTR2O43614 444 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 EIF4E2O60573 245 aaKnown RBP12.97□□□□□ -0.33
CTSA-219ENST00000607841 SLC19A2O60779 497 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 DBIP07108 87 aaKnown RBP12.97□□□□□ -0.33
CTSA-219ENST00000607841 NUDT7P0C024 238 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 UBL4AP11441 157 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 SLC6A2P23975 617 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 MTPNP58546 118 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 HSF1Q00613 529 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 ART3Q13508 389 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 CAPRIN1Q14444 709 aaKnown RBP12.97□□□□□ -0.33
CTSA-219ENST00000607841 CD226Q15762 336 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 EIF2S3LQ2VIR3 472 aaKnown RBP12.97□□□□□ -0.33
CTSA-219ENST00000607841 NANOGP8Q6NSW7 305 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 OLIG3Q7RTU3 272 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 TREML1Q86YW5 311 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 PEX5LQ8IYB4 626 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 FAM83FQ8NEG4 500 aaPredicted RBP12.97□□□□□ -0.33
CTSA-219ENST00000607841 BBS10Q8TAM1 723 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 RCN3Q96D15 328 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 C1GALT1C1Q96EU7 318 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 TMEM19Q96HH6 336 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 TREX2Q9BQ50 279 aaPredicted RBP12.97□□□□□ -0.33
CTSA-219ENST00000607841 IKZF5Q9H5V7 419 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 TMEM38AQ9H6F2 299 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 NANOGQ9H9S0 305 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 BCL2L10Q9HD36 194 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 ZNF232Q9UNY5 417 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 OSGIN2Q9Y236 505 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 AP3M1Q9Y2T2 418 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 LIPGQ9Y5X9 500 aa12.97□□□□□ -0.33
CTSA-219ENST00000607841 ZNF462Q96JM2 2506 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 A0A087WZY1 265 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 C15orf38-AP3S2A0A0A6YYH1 394 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 AGAP5A6NIR3 686 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 NDUFAB1O14561 156 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 AIM2O14862 343 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 CSTAP01040 98 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 ARAFP10398 606 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 IL7RP16871 459 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 UQCRFS1P47985 274 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 P2RX1P51575 399 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 ZNF41P51814 821 aaPredicted RBP12.96□□□□□ -0.33
CTSA-219ENST00000607841 SUMO3P55854 103 aaPredicted RBP12.96□□□□□ -0.33
CTSA-219ENST00000607841 KCNJ10P78508 379 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 CDK6Q00534 326 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 KCNC4Q03721 635 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 RBBP4Q09028 425 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 FGFBP1Q14512 234 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 MAPK14Q16539 360 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 CYP51A1Q16850 503 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 ZSWIM7Q19AV6 140 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 GLYR1Q49A26 553 aaPredicted RBP12.96□□□□□ -0.33
CTSA-219ENST00000607841 EIPR1Q53HC9 387 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 WIPI1Q5MNZ9 446 aaPredicted RBP12.96□□□□□ -0.33
CTSA-219ENST00000607841 REEP3Q6NUK4 255 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 AAGABQ6PD74 315 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 Q6ZPB1 254 aaPredicted RBP12.96□□□□□ -0.33
CTSA-219ENST00000607841 ARPINQ7Z6K5 226 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 SERPINA11Q86U17 422 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 YRDCQ86U90 279 aaKnown RBP12.96□□□□□ -0.33
CTSA-219ENST00000607841 IFNEQ86WN2 208 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 CMIPQ8IY22 773 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 EID3Q8N140 333 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 TOR1AIP2Q8NFQ8 470 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 FAM57AQ8TBR7 257 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 BCAS4Q8TDM0 211 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 MAL2Q969L2 176 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 ZG16BQ96DA0 208 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 SH3YL1Q96HL8 342 aaPredicted RBP12.96□□□□□ -0.33
CTSA-219ENST00000607841 HOPXQ9BPY8 73 aaPredicted RBP12.96□□□□□ -0.33
CTSA-219ENST00000607841 ECSITQ9BQ95 431 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 SPATA9Q9BWV2 254 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 SLC6A15Q9H2J7 730 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 ARMC7Q9H6L4 198 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 RUBCNLQ9H714 662 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 KAT8Q9H7Z6 458 aaKnown RBP12.96□□□□□ -0.33
CTSA-219ENST00000607841 KCNE5Q9UJ90 142 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 ACAD8Q9UKU7 415 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 CARD8Q9Y2G2 431 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 ZNF835Q9Y2P0 537 aa12.96□□□□□ -0.33
CTSA-219ENST00000607841 DSPPQ9NZW4 1301 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 TRGV8A0A0C4DH27 118 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 A0A1B0GUH1 482 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 C17orf51A8MQB3 221 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 NPIPA2E9PIF3 369 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 NPIPA3F8WFD2 350 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 LINC01387J3KSC0 135 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 FXYD1O00168 92 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 GMFGO60234 142 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 ZIC3O60481 467 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 PGM3O95394 542 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 ACTL6AO96019 429 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 TPOP07202 933 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 STSP08842 583 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 HK1P19367 917 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms