RNA–Protein interactions for RNA: ENST00000602888.5

UBE2E3-212, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-212ENST00000602888 PTGFRP43088 359 aa3.28□□□□□ -1.88
UBE2E3-212ENST00000602888 STARP49675 285 aa3.28□□□□□ -1.88
UBE2E3-212ENST00000602888 EFNA3P52797 238 aa3.28□□□□□ -1.88
UBE2E3-212ENST00000602888 NAPAP54920 295 aa3.28□□□□□ -1.88
UBE2E3-212ENST00000602888 MTTPP55157 894 aa3.28□□□□□ -1.88
UBE2E3-212ENST00000602888 NTHL1P78549 312 aa3.28□□□□□ -1.88
UBE2E3-212ENST00000602888 MRPS11P82912 194 aaKnown RBP3.28□□□□□ -1.88
UBE2E3-212ENST00000602888 CDC37Q16543 378 aaPredicted RBP3.28□□□□□ -1.88
UBE2E3-212ENST00000602888 TMEM52BQ4KMG9 183 aa3.28□□□□□ -1.88
UBE2E3-212ENST00000602888 FAM74A3Q4VXF1 159 aa3.28□□□□□ -1.88
UBE2E3-212ENST00000602888 PPP1R27Q86WC6 154 aa3.28□□□□□ -1.88
UBE2E3-212ENST00000602888 CBWD2Q8IUF1 395 aa3.28□□□□□ -1.88
UBE2E3-212ENST00000602888 BBS1Q8NFJ9 593 aa3.28□□□□□ -1.88
UBE2E3-212ENST00000602888 OR5AU1Q8NGC0 362 aa3.28□□□□□ -1.88
UBE2E3-212ENST00000602888 SMIM14Q96QK8 99 aa3.28□□□□□ -1.88
UBE2E3-212ENST00000602888 ZNF184Q99676 751 aaPredicted RBP3.28□□□□□ -1.88
UBE2E3-212ENST00000602888 SLC30A2Q9BRI3 323 aa3.28□□□□□ -1.88
UBE2E3-212ENST00000602888 CCSER1Q9C0I3 900 aa3.28□□□□□ -1.88
UBE2E3-212ENST00000602888 CAB39LQ9H9S4 337 aa3.28□□□□□ -1.88
UBE2E3-212ENST00000602888 USP16Q9Y5T5 823 aa3.28□□□□□ -1.88
UBE2E3-212ENST00000602888 EMC8O43402 210 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 DUX1O43812 170 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 KRT6AP02538 564 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 CHRNA1P02708 482 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 KRT6BP04259 564 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 PDHBP11177 359 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 KRT6CP48668 564 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 IL1RL1Q01638 556 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 RGS1Q08116 209 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 ELAVL3Q14576 367 aaKnown RBP3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 TRIP10Q15642 601 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 CHI3L2Q15782 390 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 LRRC36Q1X8D7 754 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 ZNF311Q5JNZ3 666 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 OTPQ5XKR4 325 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 ZCCHC12Q6PEW1 402 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 ERASQ7Z444 233 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 ANKRD37Q7Z713 158 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 ZBTB44Q8NCP5 570 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 OR2A12Q8NGT7 310 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 ANKRD49Q8WVL7 239 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 SELENOMQ8WWX9 145 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 NEIL2Q969S2 332 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 MARC2Q969Z3 335 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 NICN1Q9BSH3 213 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 FICDQ9BVA6 458 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 AGPAT5Q9NUQ2 364 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 MRPL39Q9NYK5 338 aaKnown RBP3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 ONECUT1Q9UBC0 465 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 NCAPD2Q15021 1401 aa3.27□□□□□ -1.89
UBE2E3-212ENST00000602888 IGHV7-81A0A0B4J1V7 117 aa3.26□□□□□ -1.89
UBE2E3-212ENST00000602888 HBQ1P09105 142 aa3.26□□□□□ -1.89
UBE2E3-212ENST00000602888 ADRA1AP35348 466 aa3.26□□□□□ -1.89
UBE2E3-212ENST00000602888 GCKP35557 465 aa3.26□□□□□ -1.89
UBE2E3-212ENST00000602888 RIPK4P57078 832 aa3.26□□□□□ -1.89
UBE2E3-212ENST00000602888 ZNF45Q02386 682 aa3.26□□□□□ -1.89
UBE2E3-212ENST00000602888 ST3GAL3Q11203 375 aa3.26□□□□□ -1.89
UBE2E3-212ENST00000602888 AANATQ16613 207 aa3.26□□□□□ -1.89
UBE2E3-212ENST00000602888 SULT1C3Q6IMI6 304 aa3.26□□□□□ -1.89
UBE2E3-212ENST00000602888 NIPAL3Q6P499 406 aa3.26□□□□□ -1.89
UBE2E3-212ENST00000602888 LRRC8BQ6P9F7 803 aa3.26□□□□□ -1.89
UBE2E3-212ENST00000602888 ISLR2Q6UXK2 745 aa3.26□□□□□ -1.89
UBE2E3-212ENST00000602888 CENPUQ71F23 418 aa3.26□□□□□ -1.89
UBE2E3-212ENST00000602888 CATSPER4Q7RTX7 472 aa3.26□□□□□ -1.89
UBE2E3-212ENST00000602888 LHFPL4Q7Z7J7 247 aa3.26□□□□□ -1.89
UBE2E3-212ENST00000602888 ERI1Q8IV48 349 aaKnown RBP3.26□□□□□ -1.89
UBE2E3-212ENST00000602888 M1APQ8TC57 530 aa3.26□□□□□ -1.89
UBE2E3-212ENST00000602888 TESK2Q96S53 571 aa3.26□□□□□ -1.89
UBE2E3-212ENST00000602888 PPDPFQ9H3Y8 114 aa3.26□□□□□ -1.89
UBE2E3-212ENST00000602888 ECT2Q9H8V3 914 aa3.26□□□□□ -1.89
UBE2E3-212ENST00000602888 FANCFQ9NPI8 374 aa3.26□□□□□ -1.89
UBE2E3-212ENST00000602888 RPS6KB2Q9UBS0 482 aa3.26□□□□□ -1.89
UBE2E3-212ENST00000602888 ZNF221Q9UK13 617 aa3.26□□□□□ -1.89
UBE2E3-212ENST00000602888 WI2-2373I1.2A0A1W2PRP0 233 aa3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 OR6C65A6NJZ3 312 aa3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 OR8U8P0C7N1 319 aa3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 IGLL1P15814 213 aa3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 KIF5BP33176 963 aa3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 GNB2P62879 340 aa3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 ORC2Q13416 577 aaPredicted RBP3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 CAPRIN1Q14444 709 aaKnown RBP3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 ATXN7L3Q14CW9 347 aaPredicted RBP3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 EOGTQ5NDL2 527 aa3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 ARSKQ6UWY0 536 aa3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 UNC5DQ6UXZ4 953 aa3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 ZNF589Q86UQ0 364 aaPredicted RBP3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 SKA3Q8IX90 412 aa3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 GCNT2Q8N0V5 402 aa3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 CNIH3Q8TBE1 160 aa3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 PLEKHF1Q96S99 279 aa3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 GSDMCQ9BYG8 508 aa3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 PAK1IP1Q9NWT1 392 aaPredicted RBP3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 XPO7Q9UIA9 1087 aaKnown RBP3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 RIMS3Q9UJD0 308 aa3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 ANAPC7Q9UJX3 599 aa3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 B9D1Q9UPM9 204 aa3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 WDR45Q9Y484 360 aa3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 MAB21L2Q9Y586 359 aa3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 SPACA6W5XKT8 324 aa3.25□□□□□ -1.89
UBE2E3-212ENST00000602888 ARHGAP23Q9P227 1491 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms