RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 CPEB2Q7Z5Q1 589 aaKnown RBP16.02■□□□□ 0.16
PPFIA3-207ENST00000602716 OR1N1Q8NGS0 311 aa16.02■□□□□ 0.16
PPFIA3-207ENST00000602716 CHPT1Q8WUD6 406 aa16.02■□□□□ 0.16
PPFIA3-207ENST00000602716 METTL21AQ8WXB1 218 aa16.02■□□□□ 0.16
PPFIA3-207ENST00000602716 BTBD2Q9BX70 525 aa16.02■□□□□ 0.16
PPFIA3-207ENST00000602716 CCDC90BQ9GZT6 254 aa16.02■□□□□ 0.16
PPFIA3-207ENST00000602716 SEC14L3Q9UDX4 400 aa16.02■□□□□ 0.16
PPFIA3-207ENST00000602716 NXT1Q9UKK6 140 aaKnown RBP16.02■□□□□ 0.16
PPFIA3-207ENST00000602716 WDR45Q9Y484 360 aa16.02■□□□□ 0.16
PPFIA3-207ENST00000602716 GFRA3O60609 400 aa16.02■□□□□ 0.15
PPFIA3-207ENST00000602716 SULT1C4O75897 302 aa16.02■□□□□ 0.15
PPFIA3-207ENST00000602716 FPR1P21462 350 aa16.02■□□□□ 0.15
PPFIA3-207ENST00000602716 F8A1P23610 371 aa16.02■□□□□ 0.15
PPFIA3-207ENST00000602716 ACVR2AP27037 513 aa16.02■□□□□ 0.15
PPFIA3-207ENST00000602716 DNAJA1P31689 397 aaKnown RBP16.02■□□□□ 0.15
PPFIA3-207ENST00000602716 GABREP78334 506 aa16.02■□□□□ 0.15
PPFIA3-207ENST00000602716 GPR68Q15743 365 aa16.02■□□□□ 0.15
PPFIA3-207ENST00000602716 C16orf47Q6ZP98 133 aaPredicted RBP16.02■□□□□ 0.15
PPFIA3-207ENST00000602716 RBM45Q8IUH3 476 aaKnown RBP16.02■□□□□ 0.15
PPFIA3-207ENST00000602716 CENPSQ8N2Z9 138 aa16.02■□□□□ 0.15
PPFIA3-207ENST00000602716 PARP8Q8N3A8 854 aa16.02■□□□□ 0.15
PPFIA3-207ENST00000602716 OR2Y1Q8NGV0 311 aa16.02■□□□□ 0.15
PPFIA3-207ENST00000602716 SPPL2AQ8TCT8 520 aa16.02■□□□□ 0.15
PPFIA3-207ENST00000602716 ADIPOR1Q96A54 375 aa16.02■□□□□ 0.15
PPFIA3-207ENST00000602716 BCL7BQ9BQE9 202 aa16.02■□□□□ 0.15
PPFIA3-207ENST00000602716 DUSP21Q9H596 190 aa16.02■□□□□ 0.15
PPFIA3-207ENST00000602716 ERVK-18Q9QC07 812 aa16.02■□□□□ 0.15
PPFIA3-207ENST00000602716 PADI1Q9ULC6 663 aa16.02■□□□□ 0.15
PPFIA3-207ENST00000602716 GPR55Q9Y2T6 319 aaPredicted RBP16.02■□□□□ 0.15
PPFIA3-207ENST00000602716 SH3GLB1Q9Y371 365 aa16.02■□□□□ 0.15
PPFIA3-207ENST00000602716 HS3ST3B1Q9Y662 390 aa16.02■□□□□ 0.15
PPFIA3-207ENST00000602716 PCSK5Q92824 1860 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 A0A0G2JPF8 293 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 HNRNPCL2B2RXH8 293 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 HNRNPCL3B7ZW38 293 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 M0R3H8 397 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 SLC30A4O14863 429 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 FRS3O43559 492 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 DYRK3O43781 588 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 KIAA0513O60268 411 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 GABARAPO95166 117 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 AGR2O95994 175 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 FABP3P05413 133 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 CELA2AP08217 269 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 HNRNPCL4P0DMR1 293 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 CYP4B1P13584 511 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 TCN2P20062 427 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 NR4A1P22736 598 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 FMO3P31513 532 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 TRHRP34981 398 aaPredicted RBP16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 KCNJ5P48544 419 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 ARHGDIAP52565 204 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 CXCR4P61073 352 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 SLC35A2P78381 396 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 PLAURQ03405 335 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 PCOLCEQ15113 449 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 ZNHIT3Q15649 155 aaPredicted RBP16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 IFI44LQ53G44 452 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 DESI1Q6ICB0 168 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 PRR22Q8IZ63 422 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 ARSGQ96EG1 525 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 ZNF607Q96SK3 696 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 PRODH2Q9UF12 536 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 ZNF451Q9Y4E5 1061 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 PCDHGA10Q9Y5H3 936 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 J3KTA2 159 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 SEMA7AO75326 666 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 PDE9AO76083 593 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 OCM2P0CE71 109 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 OCMP0CE72 109 aaPredicted RBP16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 OPRL1P41146 370 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 PRAMEF8Q5VWM4 474 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 PRAMEF7Q5VXH5 474 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 TMPRSS12Q86WS5 348 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 MORN4Q8NDC4 146 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 B3GNT7Q8NFL0 401 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 VANGL1Q8TAA9 524 aaPredicted RBP16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 SLC46A1Q96NT5 459 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 WWTR1Q9GZV5 400 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 FLRT3Q9NZU0 649 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 ERGIC3Q9Y282 383 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 TPRKBQ9Y3C4 175 aa16.01■□□□□ 0.15
PPFIA3-207ENST00000602716 CNOT1A5YKK6 2376 aaKnown RBP16■□□□□ 0.15
PPFIA3-207ENST00000602716 BRINP1O60477 761 aa16■□□□□ 0.15
PPFIA3-207ENST00000602716 STX11O75558 287 aa16■□□□□ 0.15
PPFIA3-207ENST00000602716 ALPPP05187 535 aa16■□□□□ 0.15
PPFIA3-207ENST00000602716 ELOAQ14241 798 aaKnown RBP16■□□□□ 0.15
PPFIA3-207ENST00000602716 GNA13Q14344 377 aa16■□□□□ 0.15
PPFIA3-207ENST00000602716 NPTX1Q15818 432 aa16■□□□□ 0.15
PPFIA3-207ENST00000602716 TMEM164Q5U3C3 297 aa16■□□□□ 0.15
PPFIA3-207ENST00000602716 IGFN1Q86VF2 1251 aa16■□□□□ 0.15
PPFIA3-207ENST00000602716 TSPYL5Q86VY4 417 aaPredicted RBP16■□□□□ 0.15
PPFIA3-207ENST00000602716 KRT73Q86Y46 540 aa16■□□□□ 0.15
PPFIA3-207ENST00000602716 BCORP1Q8N888 145 aa16■□□□□ 0.15
PPFIA3-207ENST00000602716 RORBQ92753 470 aa16■□□□□ 0.15
PPFIA3-207ENST00000602716 EFHD2Q96C19 240 aaPredicted RBP16■□□□□ 0.15
PPFIA3-207ENST00000602716 ZNF347Q96SE7 839 aa16■□□□□ 0.15
PPFIA3-207ENST00000602716 Q9N2J8 555 aa16■□□□□ 0.15
PPFIA3-207ENST00000602716 RLIMQ9NVW2 624 aa16■□□□□ 0.15
PPFIA3-207ENST00000602716 CALML5Q9NZT1 146 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms