RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 HRNRQ86YZ3 2850 aaPredicted RBP15.54■□□□□ 0.08
HERC3-214ENST00000601319 CLCA1A8K7I4 914 aa15.53■□□□□ 0.08
HERC3-214ENST00000601319 AGR2O95994 175 aa15.53■□□□□ 0.08
HERC3-214ENST00000601319 GUSBP08236 651 aa15.53■□□□□ 0.08
HERC3-214ENST00000601319 SNRPB2P08579 225 aaKnown RBP15.53■□□□□ 0.08
HERC3-214ENST00000601319 POU3F2P20265 443 aaPredicted RBP15.53■□□□□ 0.08
HERC3-214ENST00000601319 SSTR2P30874 369 aa15.53■□□□□ 0.08
HERC3-214ENST00000601319 STARP49675 285 aa15.53■□□□□ 0.08
HERC3-214ENST00000601319 ASCL1P50553 236 aa15.53■□□□□ 0.08
HERC3-214ENST00000601319 UFM1P61960 85 aa15.53■□□□□ 0.08
HERC3-214ENST00000601319 RPS26P62854 115 aaKnown RBP15.53■□□□□ 0.08
HERC3-214ENST00000601319 SRYQ05066 204 aa15.53■□□□□ 0.08
HERC3-214ENST00000601319 CD226Q15762 336 aa15.53■□□□□ 0.08
HERC3-214ENST00000601319 PDCD4Q53EL6 469 aaKnown RBP15.53■□□□□ 0.08
HERC3-214ENST00000601319 KLHL26Q53HC5 615 aa15.53■□□□□ 0.08
HERC3-214ENST00000601319 SAXO2Q658L1 398 aa15.53■□□□□ 0.08
HERC3-214ENST00000601319 ANKRD46Q86W74 232 aa15.53■□□□□ 0.08
HERC3-214ENST00000601319 ZNF295-AS1Q8N0V1 137 aa15.53■□□□□ 0.08
HERC3-214ENST00000601319 MEIOBQ8N635 442 aa15.53■□□□□ 0.08
HERC3-214ENST00000601319 C9orf106Q8NAJ2 232 aa15.53■□□□□ 0.08
HERC3-214ENST00000601319 OR5D16Q8NGK9 328 aa15.53■□□□□ 0.08
HERC3-214ENST00000601319 OIT3Q8WWZ8 545 aa15.53■□□□□ 0.08
HERC3-214ENST00000601319 ZBTB8AQ96BR9 441 aa15.53■□□□□ 0.08
HERC3-214ENST00000601319 NEURL3Q96EH8 262 aa15.53■□□□□ 0.08
HERC3-214ENST00000601319 NMUR2Q9GZQ4 415 aa15.53■□□□□ 0.08
HERC3-214ENST00000601319 ACBD3Q9H3P7 528 aa15.53■□□□□ 0.08
HERC3-214ENST00000601319 AP4B1Q9Y6B7 739 aa15.53■□□□□ 0.08
HERC3-214ENST00000601319 HEATR5AQ86XA9 2040 aa15.52■□□□□ 0.08
HERC3-214ENST00000601319 CSMD2Q7Z408 3487 aa15.52■□□□□ 0.08
HERC3-214ENST00000601319 RCBTB2O95199 551 aa15.52■□□□□ 0.08
HERC3-214ENST00000601319 PGRP06401 933 aa15.52■□□□□ 0.08
HERC3-214ENST00000601319 MATN1P21941 496 aa15.52■□□□□ 0.08
HERC3-214ENST00000601319 BMP5P22003 454 aa15.52■□□□□ 0.08
HERC3-214ENST00000601319 TCEA1P23193 301 aaKnown RBP15.52■□□□□ 0.08
HERC3-214ENST00000601319 CTSSP25774 331 aa15.52■□□□□ 0.08
HERC3-214ENST00000601319 OPRM1P35372 400 aa15.52■□□□□ 0.08
HERC3-214ENST00000601319 PEX19P40855 299 aa15.52■□□□□ 0.08
HERC3-214ENST00000601319 ATP12AP54707 1039 aa15.52■□□□□ 0.08
HERC3-214ENST00000601319 SUMO3P55854 103 aaPredicted RBP15.52■□□□□ 0.08
HERC3-214ENST00000601319 EEFSECP57772 596 aaKnown RBP15.52■□□□□ 0.08
HERC3-214ENST00000601319 GSTA3Q16772 222 aa15.52■□□□□ 0.08
HERC3-214ENST00000601319 PLPPR5Q32ZL2 321 aa15.52■□□□□ 0.08
HERC3-214ENST00000601319 FLYWCH1Q4VC44 716 aa15.52■□□□□ 0.08
HERC3-214ENST00000601319 SLC9B1Q4ZJI4 515 aa15.52■□□□□ 0.08
HERC3-214ENST00000601319 AP1ARQ63HQ0 302 aa15.52■□□□□ 0.08
HERC3-214ENST00000601319 HEPHL1Q6MZM0 1159 aa15.52■□□□□ 0.08
HERC3-214ENST00000601319 ARSKQ6UWY0 536 aa15.52■□□□□ 0.08
HERC3-214ENST00000601319 GTPBP8Q8N3Z3 284 aaPredicted RBP15.52■□□□□ 0.08
HERC3-214ENST00000601319 GOLGA6L1Q8N7Z2 621 aa15.52■□□□□ 0.08
HERC3-214ENST00000601319 GATSQ8NAP1 163 aa15.52■□□□□ 0.08
HERC3-214ENST00000601319 LRRC8CQ8TDW0 803 aa15.52■□□□□ 0.08
HERC3-214ENST00000601319 SDF2Q99470 211 aa15.52■□□□□ 0.08
HERC3-214ENST00000601319 ZBTB18Q99592 522 aa15.52■□□□□ 0.08
HERC3-214ENST00000601319 SFXN3Q9BWM7 321 aa15.52■□□□□ 0.08
HERC3-214ENST00000601319 SDR39U1Q9NRG7 319 aaPredicted RBP15.52■□□□□ 0.08
HERC3-214ENST00000601319 ZNF337Q9Y3M9 751 aa15.52■□□□□ 0.08
HERC3-214ENST00000601319 USH1CQ9Y6N9 552 aa15.52■□□□□ 0.08
HERC3-214ENST00000601319 H3BNH8 94 aa15.51■□□□□ 0.07
HERC3-214ENST00000601319 STX11O75558 287 aa15.51■□□□□ 0.07
HERC3-214ENST00000601319 TMIGD3P0DMS9 266 aaPredicted RBP15.51■□□□□ 0.07
HERC3-214ENST00000601319 IL12AP29459 219 aa15.51■□□□□ 0.07
HERC3-214ENST00000601319 KHKP50053 298 aa15.51■□□□□ 0.07
HERC3-214ENST00000601319 ZNF41P51814 821 aaPredicted RBP15.51■□□□□ 0.07
HERC3-214ENST00000601319 DGKQP52824 942 aa15.51■□□□□ 0.07
HERC3-214ENST00000601319 EEF1A1P68104 462 aaKnown RBP15.51■□□□□ 0.07
HERC3-214ENST00000601319 TXNL4AP83876 142 aaKnown RBP15.51■□□□□ 0.07
HERC3-214ENST00000601319 ZNF117Q03924 483 aa15.51■□□□□ 0.07
HERC3-214ENST00000601319 ARHGAP11BQ3KRB8 267 aa15.51■□□□□ 0.07
HERC3-214ENST00000601319 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.51■□□□□ 0.07
HERC3-214ENST00000601319 EEF1A1P5Q5VTE0 462 aa15.51■□□□□ 0.07
HERC3-214ENST00000601319 NXNQ6DKJ4 435 aa15.51■□□□□ 0.07
HERC3-214ENST00000601319 CLEC4FQ8N1N0 589 aa15.51■□□□□ 0.07
HERC3-214ENST00000601319 B4GALNT2Q8NHY0 566 aa15.51■□□□□ 0.07
HERC3-214ENST00000601319 LRRC46Q96FV0 321 aa15.51■□□□□ 0.07
HERC3-214ENST00000601319 OR52B2Q96RD2 323 aa15.51■□□□□ 0.07
HERC3-214ENST00000601319 SLC35A5Q9BS91 424 aa15.51■□□□□ 0.07
HERC3-214ENST00000601319 ZNF350Q9GZX5 532 aa15.51■□□□□ 0.07
HERC3-214ENST00000601319 OR51I1Q9H343 314 aa15.51■□□□□ 0.07
HERC3-214ENST00000601319 POLE3Q9NRF9 147 aa15.51■□□□□ 0.07
HERC3-214ENST00000601319 MED17Q9NVC6 651 aa15.51■□□□□ 0.07
HERC3-214ENST00000601319 EXD2Q9NVH0 621 aa15.51■□□□□ 0.07
HERC3-214ENST00000601319 ZIM2Q9NZV7 527 aa15.51■□□□□ 0.07
HERC3-214ENST00000601319 JKAMPQ9P055 326 aa15.51■□□□□ 0.07
HERC3-214ENST00000601319 STOML1Q9UBI4 398 aa15.51■□□□□ 0.07
HERC3-214ENST00000601319 KCNN3Q9UGI6 736 aa15.51■□□□□ 0.07
HERC3-214ENST00000601319 FOXD3Q9UJU5 478 aaPredicted RBP15.51■□□□□ 0.07
HERC3-214ENST00000601319 DTNAQ9Y4J8 743 aa15.51■□□□□ 0.07
HERC3-214ENST00000601319 POLQO75417 2590 aa15.51■□□□□ 0.07
HERC3-214ENST00000601319 H3BML4 177 aa15.5■□□□□ 0.07
HERC3-214ENST00000601319 SYT5O00445 386 aa15.5■□□□□ 0.07
HERC3-214ENST00000601319 TNFRSF21O75509 655 aa15.5■□□□□ 0.07
HERC3-214ENST00000601319 TGDSO95455 350 aa15.5■□□□□ 0.07
HERC3-214ENST00000601319 CPSF4O95639 269 aaKnown RBP15.5■□□□□ 0.07
HERC3-214ENST00000601319 IL6P05231 212 aa15.5■□□□□ 0.07
HERC3-214ENST00000601319 PSMA4P25789 261 aaKnown RBP15.5■□□□□ 0.07
HERC3-214ENST00000601319 MRPL19P49406 292 aaKnown RBP15.5■□□□□ 0.07
HERC3-214ENST00000601319 NME5P56597 212 aa15.5■□□□□ 0.07
HERC3-214ENST00000601319 CLDN15P56746 228 aa15.5■□□□□ 0.07
HERC3-214ENST00000601319 OR2A2Q6IF42 318 aa15.5■□□□□ 0.07
HERC3-214ENST00000601319 EPGNQ6UW88 154 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms