RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 FBXO42Q6P3S6 717 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 NIPAL3Q6P499 406 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 RD3Q7Z3Z2 195 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 TMEFF1Q8IYR6 380 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 ACBD7Q8N6N7 88 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 KXD1Q9BQD3 176 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 TMEM43Q9BTV4 400 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 KLF15Q9UIH9 416 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 PCDHGB7Q9Y5F8 929 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 TBC1D3DA0A087WVF3 549 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 TBC1D3IA0A087WXS9 549 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 TBC1D3EA0A087X179 549 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 UNC119BA6NIH7 251 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 GRXCR1A8MXD5 290 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 TBC1D3LB9A6J9 549 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 LYRM1O43325 122 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 KCNJ13O60928 360 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 SLC35G6P0C7Q6 338 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 TBC1D3HP0C7X1 549 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 DUSP8Q13202 625 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 TBC1D3CQ6IPX1 549 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 METAP1DQ6UB28 335 aaPredicted RBP18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 TBC1D3Q8IZP1 549 aaPredicted RBP18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 CCL4L1Q8NHW4 92 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 UPRTQ96BW1 309 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 ALG8Q9BVK2 526 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 TRPV4Q9HBA0 871 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 ADAP2Q9NPF8 381 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 SIDT1Q9NXL6 827 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 OBP2AQ9NY56 170 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 ALG5Q9Y673 324 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 A0A0C4DFX4 3053 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 DOCK8Q8NF50 2099 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 FAM25AB3EWG3 89 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 FAM25CB3EWG5 89 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 FAM25GB3EWG6 89 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 PLRG1O43660 514 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 CTSVO60911 334 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 FAM157BP0CG42 384 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 GAAP10253 952 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 PRKAR1AP10644 381 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 CHRNB1P11230 501 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 ELK1P19419 428 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 TBXA2RP21731 343 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 ALAS2P22557 587 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 GPM6BQ13491 265 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 IDNKQ5T6J7 187 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 MZT2AQ6P582 158 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 ZNF438Q7Z4V0 828 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 BRIX1Q8TDN6 353 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 OR2M4Q96R27 311 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 JAM3Q9BX67 310 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 PPIL3Q9H2H8 161 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 SRMSQ9H3Y6 488 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 ZNF624Q9P2J8 865 aaPredicted RBP18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 CA5BQ9Y2D0 317 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 HEBP2Q9Y5Z4 205 aa18.8■□□□□ 0.6
SHKBP1-225ENST00000600733 FAM240BA0A1B0GVZ2 78 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 PEX12O00623 359 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 BHLHE40O14503 412 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 REM1O75628 298 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 RGS9O75916 674 aaPredicted RBP18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 AGR2O95994 175 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 YES1P07947 543 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 ADPRHP54922 357 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 PPP2CBP62714 309 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 PPP2CAP67775 309 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 CSTF1Q05048 431 aaKnown RBP18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 KLHL12Q53G59 568 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 MRPL2Q5T653 305 aaKnown RBP18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 C1QTNF12Q5T7M4 302 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 RANBP3LQ86VV4 465 aaPredicted RBP18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 GID4Q8IVV7 300 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 YAF2Q8IY57 180 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 DTX3Q8N9I9 347 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 TOR1AIP2Q8NFQ8 470 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 ZC3HAV1LQ96H79 300 aaKnown RBP18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 SFXN1Q9H9B4 322 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 KRCC1Q9NPI7 259 aaPredicted RBP18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 KCNE5Q9UJ90 142 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 ZNF223Q9UK11 482 aaPredicted RBP18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 LOC102723532A0A0G2JNH3 316 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 TRAPPC13A5PLN9 417 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 IFI30P13284 250 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 HLA-DMAP28067 261 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 FAM27D1Q5T7N8 215 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 FCRLBQ6BAA4 426 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 MZT2BQ6NZ67 158 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 IL20RBQ6UXL0 311 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 MEPCEQ7L2J0 689 aaKnown RBP18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 NT5CQ8TCD5 201 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 CD180Q99467 661 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 KCNJ15Q99712 375 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 BABAM2Q9NXR7 383 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 DAPP1Q9UN19 280 aa18.79■□□□□ 0.6
SHKBP1-225ENST00000600733 A0A0G2JMP0 313 aa18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 A0A0X1KG70 313 aa18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 SYNDIG1LA6NDD5 238 aa18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 H0Y8X5 98 aa18.78■□□□□ 0.6
SHKBP1-225ENST00000600733 SCO2O43819 266 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms