RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 ZNF474Q6S9Z5 364 aaPredicted RBP14.21□□□□□ -0.13
VRK3-221ENST00000600284 FAM214BQ7L5A3 538 aa14.21□□□□□ -0.13
VRK3-221ENST00000600284 ZAR1Q86SH2 424 aa14.21□□□□□ -0.13
VRK3-221ENST00000600284 GALNT10Q86SR1 603 aa14.21□□□□□ -0.13
VRK3-221ENST00000600284 GGNQ86UU5 652 aa14.21□□□□□ -0.13
VRK3-221ENST00000600284 KIRREL3Q8IZU9 778 aa14.21□□□□□ -0.13
VRK3-221ENST00000600284 ZNF527Q8NB42 609 aa14.21□□□□□ -0.13
VRK3-221ENST00000600284 PPP1R14CQ8TAE6 165 aa14.21□□□□□ -0.13
VRK3-221ENST00000600284 FBXO30Q8TB52 745 aa14.21□□□□□ -0.13
VRK3-221ENST00000600284 FNDC9Q8TBE3 224 aa14.21□□□□□ -0.13
VRK3-221ENST00000600284 SFXN5Q8TD22 340 aa14.21□□□□□ -0.13
VRK3-221ENST00000600284 ADAMTS15Q8TE58 950 aa14.21□□□□□ -0.13
VRK3-221ENST00000600284 ZNF845Q96IR2 970 aaPredicted RBP14.21□□□□□ -0.13
VRK3-221ENST00000600284 C1orf50Q9BV19 199 aa14.21□□□□□ -0.13
VRK3-221ENST00000600284 MED17Q9NVC6 651 aa14.21□□□□□ -0.13
VRK3-221ENST00000600284 FBXO34Q9NWN3 711 aa14.21□□□□□ -0.13
VRK3-221ENST00000600284 ASIC5Q9NY37 505 aa14.21□□□□□ -0.13
VRK3-221ENST00000600284 FAF1Q9UNN5 650 aaPredicted RBP14.21□□□□□ -0.13
VRK3-221ENST00000600284 PLEKHA6Q9Y2H5 1048 aa14.21□□□□□ -0.13
VRK3-221ENST00000600284 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.21□□□□□ -0.13
VRK3-221ENST00000600284 TESMINQ9Y4I5 508 aa14.21□□□□□ -0.13
VRK3-221ENST00000600284 SNX8Q9Y5X2 465 aa14.21□□□□□ -0.13
VRK3-221ENST00000600284 PCNX3Q9H6A9 2034 aa14.2□□□□□ -0.14
VRK3-221ENST00000600284 EIF1AYO14602 144 aaKnown RBP14.2□□□□□ -0.14
VRK3-221ENST00000600284 ADAMDEC1O15204 470 aa14.2□□□□□ -0.14
VRK3-221ENST00000600284 RGS16O15492 202 aaPredicted RBP14.2□□□□□ -0.14
VRK3-221ENST00000600284 SERPINE1P05121 402 aa14.2□□□□□ -0.14
VRK3-221ENST00000600284 ATP6V1C1P21283 382 aa14.2□□□□□ -0.14
VRK3-221ENST00000600284 PSMA4P25789 261 aaKnown RBP14.2□□□□□ -0.14
VRK3-221ENST00000600284 CPOXP36551 454 aa14.2□□□□□ -0.14
VRK3-221ENST00000600284 EIF1P41567 113 aaKnown RBP14.2□□□□□ -0.14
VRK3-221ENST00000600284 CLDN8P56748 225 aa14.2□□□□□ -0.14
VRK3-221ENST00000600284 FAM27E3Q08E93 113 aa14.2□□□□□ -0.14
VRK3-221ENST00000600284 PLPPR5Q32ZL2 321 aa14.2□□□□□ -0.14
VRK3-221ENST00000600284 KRT71Q3SY84 523 aa14.2□□□□□ -0.14
VRK3-221ENST00000600284 PDSS1Q5T2R2 415 aa14.2□□□□□ -0.14
VRK3-221ENST00000600284 TGIF2LYQ8IUE0 185 aa14.2□□□□□ -0.14
VRK3-221ENST00000600284 B4GALNT2Q8NHY0 566 aa14.2□□□□□ -0.14
VRK3-221ENST00000600284 CDS1Q92903 461 aa14.2□□□□□ -0.14
VRK3-221ENST00000600284 CHMP6Q96FZ7 201 aa14.2□□□□□ -0.14
VRK3-221ENST00000600284 ADGRG7Q96K78 797 aa14.2□□□□□ -0.14
VRK3-221ENST00000600284 DUSP26Q9BV47 211 aa14.2□□□□□ -0.14
VRK3-221ENST00000600284 TMUB1Q9BVT8 246 aa14.2□□□□□ -0.14
VRK3-221ENST00000600284 CXorf36Q9H7Y0 433 aa14.2□□□□□ -0.14
VRK3-221ENST00000600284 GLRX2Q9NS18 164 aa14.2□□□□□ -0.14
VRK3-221ENST00000600284 GPATCH2Q9NW75 528 aa14.2□□□□□ -0.14
VRK3-221ENST00000600284 ZNF226Q9NYT6 803 aa14.2□□□□□ -0.14
VRK3-221ENST00000600284 NOP53Q9NZM5 478 aaKnown RBP14.2□□□□□ -0.14
VRK3-221ENST00000600284 SHISA8B8ZZ34 492 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 H3BNH8 94 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 TM9SF1O15321 606 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 GMFGO60234 142 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 ATE1O95260 518 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 C6orf47O95873 294 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 G6PDP11413 515 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 CD99P14209 185 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 POU2F1P14859 743 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 IL11P20809 199 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 ME2P23368 584 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 ADH6P28332 368 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 EIF1AXP47813 144 aaKnown RBP14.19□□□□□ -0.14
VRK3-221ENST00000600284 SIRPAP78324 504 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 ZNF844Q08AG5 666 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 TP53BP2Q13625 1128 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 KEAP1Q14145 624 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 SPDYE7PQ495Y7 208 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 KLHL26Q53HC5 615 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 CCNJQ5T5M9 372 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 ESPNLQ6ZVH7 1005 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 KRTCAP2Q8N6L1 136 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 GATSQ8NAP1 163 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 OR10D3Q8NH80 312 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 GMPPAQ96IJ6 420 aaPredicted RBP14.19□□□□□ -0.14
VRK3-221ENST00000600284 PARD6BQ9BYG5 372 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 PRRG4Q9BZD6 226 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 OPN3Q9H1Y3 402 aaPredicted RBP14.19□□□□□ -0.14
VRK3-221ENST00000600284 PLSCR4Q9NRQ2 329 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 MCTS1Q9ULC4 181 aaKnown RBP14.19□□□□□ -0.14
VRK3-221ENST00000600284 PROCRQ9UNN8 238 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 EMC9Q9Y3B6 208 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 RAP2CQ9Y3L5 183 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 ACTL7BQ9Y614 415 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 AKAP6Q13023 2319 aa14.19□□□□□ -0.14
VRK3-221ENST00000600284 DUXAA6NLW8 204 aa14.18□□□□□ -0.14
VRK3-221ENST00000600284 C16orf97H3BN30 126 aa14.18□□□□□ -0.14
VRK3-221ENST00000600284 AQP8O94778 261 aa14.18□□□□□ -0.14
VRK3-221ENST00000600284 LINGO3P0C6S8 592 aa14.18□□□□□ -0.14
VRK3-221ENST00000600284 MYZAPP0CAP1 466 aa14.18□□□□□ -0.14
VRK3-221ENST00000600284 UGT2B10P36537 528 aa14.18□□□□□ -0.14
VRK3-221ENST00000600284 P2RX1P51575 399 aa14.18□□□□□ -0.14
VRK3-221ENST00000600284 ATP12AP54707 1039 aa14.18□□□□□ -0.14
VRK3-221ENST00000600284 SUMO3P55854 103 aaPredicted RBP14.18□□□□□ -0.14
VRK3-221ENST00000600284 ABCE1P61221 599 aaKnown RBP14.18□□□□□ -0.14
VRK3-221ENST00000600284 CD226Q15762 336 aa14.18□□□□□ -0.14
VRK3-221ENST00000600284 CHI3L2Q15782 390 aa14.18□□□□□ -0.14
VRK3-221ENST00000600284 CTU2Q2VPK5 515 aaKnown RBP14.18□□□□□ -0.14
VRK3-221ENST00000600284 DEFB113Q30KQ7 82 aa14.18□□□□□ -0.14
VRK3-221ENST00000600284 DCST2Q5T1A1 773 aa14.18□□□□□ -0.14
VRK3-221ENST00000600284 GTF2IRD2BQ6EKJ0 949 aa14.18□□□□□ -0.14
VRK3-221ENST00000600284 GTF2IRD2Q86UP8 949 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms