RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 CLEC4MQ9H2X3 399 aaPredicted RBP13.57□□□□□ -0.24
LIG1-215ENST00000597901 GALNT8Q9NY28 637 aa13.57□□□□□ -0.24
LIG1-215ENST00000597901 STOML1Q9UBI4 398 aa13.57□□□□□ -0.24
LIG1-215ENST00000597901 HAO1Q9UJM8 370 aa13.57□□□□□ -0.24
LIG1-215ENST00000597901 PACSIN3Q9UKS6 424 aa13.57□□□□□ -0.24
LIG1-215ENST00000597901 EDARQ9UNE0 448 aa13.57□□□□□ -0.24
LIG1-215ENST00000597901 ZNF175Q9Y473 711 aa13.57□□□□□ -0.24
LIG1-215ENST00000597901 KIAA1549Q9HCM3 1950 aa13.57□□□□□ -0.24
LIG1-215ENST00000597901 MSTNO14793 375 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 OPN1LWP04000 364 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 KRT16P08779 473 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 CD1EP15812 388 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 ATP6V1C1P21283 382 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 PSMA4P25789 261 aaKnown RBP13.56□□□□□ -0.24
LIG1-215ENST00000597901 KIR2DL2P43627 348 aaPredicted RBP13.56□□□□□ -0.24
LIG1-215ENST00000597901 CPA2P48052 419 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 CD226Q15762 336 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 DCST2Q5T1A1 773 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 HHATQ5VTY9 493 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 SPNS3Q6ZMD2 512 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 BTLAQ7Z6A9 289 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 GGNQ86UU5 652 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 CDC20BQ86Y33 519 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 WDR75Q8IWA0 830 aaKnown RBP13.56□□□□□ -0.24
LIG1-215ENST00000597901 CLECL1Q8IZS7 167 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 METTL25Q8N6Q8 603 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 CNEP1R1Q8N9A8 125 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 OR5AK3PQ8NH89 298 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 B4GALNT2Q8NHY0 566 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 FNDC9Q8TBE3 224 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 PHOSPHO1Q8TCT1 267 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 ZBTB8AQ96BR9 441 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 OR7D2Q96RA2 312 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 NPAS1Q99742 590 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 KLHDC3Q9BQ90 382 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 NUF2Q9BZD4 464 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 DPY30Q9C005 99 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 LIME1Q9H400 295 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 RNF122Q9H9V4 155 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 NEUROD4Q9HD90 331 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 MED17Q9NVC6 651 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 CSMD2Q7Z408 3487 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 POLQO75417 2590 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 ARHGAP21Q5T5U3 1957 aa13.56□□□□□ -0.24
LIG1-215ENST00000597901 OTOGQ6ZRI0 2925 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 NPIPA5A0A0B4J1W7 369 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 NPIPA7E9PJI5 369 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 EIF1AYO14602 144 aaKnown RBP13.55□□□□□ -0.24
LIG1-215ENST00000597901 SCN2BO60939 215 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 SMNDC1O75940 238 aaKnown RBP eCLIP13.55□□□□□ -0.241e-7■■■□□ 18.1
LIG1-215ENST00000597901 NPIPA8P0DM63 369 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 ZNF17P17021 662 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 LBPP18428 481 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 MATN1P21941 496 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 IST1P53990 364 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 ATP12AP54707 1039 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 WDR4P57081 412 aaKnown RBP13.55□□□□□ -0.24
LIG1-215ENST00000597901 RAC1P63000 192 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 PHC1P78364 1004 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 FAM27E3Q08E93 113 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 BST1Q10588 318 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 PON3Q15166 354 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 VWA1Q6PCB0 445 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 BHLHB9Q6PI77 547 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 MTERF4Q7Z6M4 381 aaKnown RBP13.55□□□□□ -0.24
LIG1-215ENST00000597901 KIRREL3Q8IZU9 778 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 CLEC4FQ8N1N0 589 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 ANKRD42Q8N9B4 389 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 OR8J2Q8NGG1 315 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 POC1BQ8TC44 478 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 DACH2Q96NX9 599 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 SDF2Q99470 211 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 PCDHGB4Q9UN71 923 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 TACC2O95359 2948 aa13.55□□□□□ -0.24
LIG1-215ENST00000597901 PRSS51A0A1B0GVH4 220 aa13.54□□□□□ -0.24
LIG1-215ENST00000597901 C7orf72A4D263 438 aa13.54□□□□□ -0.24
LIG1-215ENST00000597901 DUXAA6NLW8 204 aa13.54□□□□□ -0.24
LIG1-215ENST00000597901 NPIPB9F8W1W9 429 aa13.54□□□□□ -0.24
LIG1-215ENST00000597901 GTPBP1O00178 669 aaKnown RBP13.54□□□□□ -0.24
LIG1-215ENST00000597901 RNASET2O00584 256 aaKnown RBP13.54□□□□□ -0.24
LIG1-215ENST00000597901 ANKRD28O15084 1053 aa13.54□□□□□ -0.24
LIG1-215ENST00000597901 ADAMDEC1O15204 470 aa13.54□□□□□ -0.24
LIG1-215ENST00000597901 OIP5O43482 229 aa13.54□□□□□ -0.24
LIG1-215ENST00000597901 AQP8O94778 261 aa13.54□□□□□ -0.24
LIG1-215ENST00000597901 CPSF4O95639 269 aaKnown RBP13.54□□□□□ -0.24
LIG1-215ENST00000597901 CGAP01215 116 aa13.54□□□□□ -0.24
LIG1-215ENST00000597901 LINGO3P0C6S8 592 aa13.54□□□□□ -0.24
LIG1-215ENST00000597901 EIF1AXP47813 144 aaKnown RBP13.54□□□□□ -0.24
LIG1-215ENST00000597901 RNF144AP50876 292 aaPredicted RBP13.54□□□□□ -0.24
LIG1-215ENST00000597901 ZNF41P51814 821 aaPredicted RBP13.54□□□□□ -0.24
LIG1-215ENST00000597901 PLPPR5Q32ZL2 321 aa13.54□□□□□ -0.24
LIG1-215ENST00000597901 ZNF474Q6S9Z5 364 aaPredicted RBP13.54□□□□□ -0.24
LIG1-215ENST00000597901 CBLN3Q6UW01 205 aa13.54□□□□□ -0.24
LIG1-215ENST00000597901 LRRC34Q8IZ02 419 aa13.54□□□□□ -0.24
LIG1-215ENST00000597901 ZNF610Q8N9Z0 462 aa13.54□□□□□ -0.24
LIG1-215ENST00000597901 ZNF527Q8NB42 609 aa13.54□□□□□ -0.24
LIG1-215ENST00000597901 OR5D16Q8NGK9 328 aa13.54□□□□□ -0.24
LIG1-215ENST00000597901 RNF145Q96MT1 663 aa13.54□□□□□ -0.24
LIG1-215ENST00000597901 PRRG4Q9BZD6 226 aa13.54□□□□□ -0.24
LIG1-215ENST00000597901 MEAF6Q9HAF1 191 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms