RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 TAS2R1Q9NYW7 299 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 MED11Q9P086 117 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 SUCOQ9UBS9 1254 aaKnown RBP9.62□□□□□ -0.87
LIG1-210ENST00000596332 MRTO4Q9UKD2 239 aaKnown RBP9.62□□□□□ -0.87
LIG1-210ENST00000596332 PACSIN3Q9UKS6 424 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 C15orf41Q9Y2V0 281 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 L3MBTL1Q9Y468 752 aa9.62□□□□□ -0.87
LIG1-210ENST00000596332 GPC6Q9Y625 555 aaPredicted RBP9.62□□□□□ -0.87
LIG1-210ENST00000596332 A0A1B0GVC2 190 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 PRORSD1PA6NEY8 169 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 TTLL8A6PVC2 850 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 FAM166BA8MTA8 275 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 EVPLLA8MZ36 301 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 SLC28A2O43868 658 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 MFN2O95140 757 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 NR2F1P10589 423 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 PSMA4P25789 261 aaKnown RBP9.61□□□□□ -0.87
LIG1-210ENST00000596332 KRT20P35900 424 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 GSK3BP49841 420 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 NUDT2P50583 147 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 SLC7A2P52569 658 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 KCNJ2P63252 427 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 HSF1Q00613 529 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 ZNF117Q03924 483 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 RBBP4Q09028 425 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 BNIP1Q12981 228 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 SKP2Q13309 424 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 TOMM34Q15785 309 aaPredicted RBP9.61□□□□□ -0.87
LIG1-210ENST00000596332 IGFBP7Q16270 282 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 VMACQ2NL98 169 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 GCNT6Q5T4J0 391 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 ATAD3BQ5T9A4 648 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 CCDC80Q76M96 950 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 RBM15BQ8NDT2 890 aaKnown RBP9.61□□□□□ -0.87
LIG1-210ENST00000596332 GPR32P1Q8NGA4 272 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 POC1BQ8TC44 478 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 CPT1CQ8TCG5 803 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 CNOT9Q92600 299 aaKnown RBP9.61□□□□□ -0.87
LIG1-210ENST00000596332 DEFB127Q9H1M4 99 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 DSN1Q9H410 356 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 ACKR4Q9NPB9 350 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 RLIMQ9NVW2 624 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 THUMPD1Q9NXG2 353 aaKnown RBP9.61□□□□□ -0.87
LIG1-210ENST00000596332 KLRF1Q9NZS2 232 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 P2RX2Q9UBL9 471 aa9.61□□□□□ -0.87
LIG1-210ENST00000596332 MRPS18CQ9Y3D5 142 aaKnown RBP9.61□□□□□ -0.87
LIG1-210ENST00000596332 B2RBV5 119 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 ETV2O00321 342 aaPredicted RBP9.6□□□□□ -0.87
LIG1-210ENST00000596332 NDUFB5O43674 189 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 TPST2O60704 377 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 CBR3O75828 277 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 NTN1O95631 604 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 ETS2P15036 469 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 CD247P20963 164 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 ATP6V1C1P21283 382 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 PCGF2P35227 344 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 ACAA2P42765 397 aaKnown RBP9.6□□□□□ -0.87
LIG1-210ENST00000596332 CRISP3P54108 245 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 GFRA1P56159 465 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 DLX5P56178 289 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 CLDN15P56746 228 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 RPP38P78345 283 aaKnown RBP9.6□□□□□ -0.87
LIG1-210ENST00000596332 KCNJ10P78508 379 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 TLE1Q04724 770 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 LIPEQ05469 1076 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 C17orf67Q0P5P2 114 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 CEACAM7Q14002 265 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 SCARB2Q14108 478 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 DUSP7Q16829 419 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 ZNF630Q2M218 657 aaPredicted RBP9.6□□□□□ -0.87
LIG1-210ENST00000596332 EIPR1Q53HC9 387 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 EMC4Q5J8M3 183 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 REEP3Q6NUK4 255 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 ARSKQ6UWY0 536 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 ZNF836Q6ZNA1 936 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 TRILQ7L0X0 811 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 PACS2Q86VP3 889 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 PGAM4Q8N0Y7 254 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 OR1J4Q8NGS1 313 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 OR52P1PQ8NH57 321 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 GPR119Q8TDV5 335 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 OIT3Q8WWZ8 545 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 TAMM41Q96BW9 452 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 REXO5Q96IC2 774 aaKnown RBP9.6□□□□□ -0.87
LIG1-210ENST00000596332 ZNF597Q96LX8 424 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 GPR137Q96N19 417 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 OR2B2Q9GZK3 357 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 QPCTLQ9NXS2 382 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 DNAJB12Q9NXW2 375 aaKnown RBP9.6□□□□□ -0.87
LIG1-210ENST00000596332 SPRR3Q9UBC9 169 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 CORO2BQ9UQ03 480 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 CARD8Q9Y2G2 431 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 ZNF835Q9Y2P0 537 aa9.6□□□□□ -0.87
LIG1-210ENST00000596332 CDHR4A6H8M9 788 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 FAM220BPB1ANY3 271 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 NPIPA5E9PKD4 350 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 M0QX08 132 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 PDE9AO76083 593 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 CRYABP02511 175 aaKnown RBP9.59□□□□□ -0.87
LIG1-210ENST00000596332 LINGO3P0C6S8 592 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms