RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 YAE1D1Q9NRH1 226 aa8.87□□□□□ -0.99
LIG1-209ENST00000596104 FBXO34Q9NWN3 711 aa8.87□□□□□ -0.99
LIG1-209ENST00000596104 WBP11Q9Y2W2 641 aaKnown RBP8.87□□□□□ -0.99
LIG1-209ENST00000596104 DPRXA6NFQ7 191 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 POC1B-GALNT4F8VUJ3 575 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 UBFD1O14562 309 aaKnown RBP8.86□□□□□ -0.99
LIG1-209ENST00000596104 CD8AP01732 235 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 SNRPAP09012 282 aaKnown RBP8.86□□□□□ -0.99
LIG1-209ENST00000596104 LINGO3P0C6S8 592 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 TAC1P20366 129 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 PRKAA2P54646 552 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 FAPQ12884 760 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 SPDYAQ5MJ70 313 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 GTF2IRD2BQ6EKJ0 949 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 TIFABQ6ZNK6 161 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 GTF2IRD2Q86UP8 949 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 DTX2Q86UW9 622 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 TRABD2AQ86V40 505 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 ZNF619Q8N2I2 560 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 KBTBD8Q8NFY9 601 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 FAM76AQ8TAV0 307 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 PIWIL2Q8TC59 973 aaKnown RBP8.86□□□□□ -0.99
LIG1-209ENST00000596104 FAM110BQ8TC76 370 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 GPR151Q8TDV0 419 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 L3HYPDHQ96EM0 354 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 ZBED6CLQ96FA7 236 aaPredicted RBP8.86□□□□□ -0.99
LIG1-209ENST00000596104 EGLN2Q96KS0 407 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 TRAF4Q9BUZ4 470 aaPredicted RBP8.86□□□□□ -0.99
LIG1-209ENST00000596104 SRXN1Q9BYN0 137 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 TRIM2Q9C040 744 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 GRIP2Q9C0E4 1043 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 GSTO2Q9H4Y5 243 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 ESRP2Q9H6T0 727 aaKnown RBP8.86□□□□□ -0.99
LIG1-209ENST00000596104 GRPEL1Q9HAV7 217 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 HHATLQ9HCP6 504 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 NGBQ9NPG2 151 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 NTMQ9P121 344 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 KLHL13Q9P2N7 655 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 GDF2Q9UK05 429 aaPredicted RBP8.86□□□□□ -0.99
LIG1-209ENST00000596104 STK38LQ9Y2H1 464 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 POLR3HQ9Y535 204 aaPredicted RBP8.86□□□□□ -0.99
LIG1-209ENST00000596104 HEATR5AQ86XA9 2040 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 NBEAL1Q6ZS30 2694 aa8.86□□□□□ -0.99
LIG1-209ENST00000596104 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 A0A1W2PP18 115 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 CCDC151A5D8V7 595 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 A8MV72 311 aaPredicted RBP8.85□□□□□ -0.99
LIG1-209ENST00000596104 ZNF814B7Z6K7 855 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 EFNA2O43921 213 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 KCNK2O95069 426 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 PABPC4LP0CB38 370 aaKnown RBP8.85□□□□□ -0.99
LIG1-209ENST00000596104 ACP2P11117 423 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 PRPS2P11908 318 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 ME2P23368 584 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 IL32P24001 234 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 SFTPDP35247 375 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 PRIM2P49643 509 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 ZNF41P51814 821 aaPredicted RBP8.85□□□□□ -0.99
LIG1-209ENST00000596104 MANFP55145 182 aaKnown RBP8.85□□□□□ -0.99
LIG1-209ENST00000596104 CARD18P57730 90 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 BSPH1Q075Z2 132 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 FOXF1Q12946 379 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 HSPB3Q12988 150 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 P2RY6Q15077 328 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 RNPS1Q15287 305 aaKnown RBP8.85□□□□□ -0.99
LIG1-209ENST00000596104 CD226Q15762 336 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 CHRFAM7AQ494W8 412 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 EXOSC6Q5RKV6 272 aaKnown RBP8.85□□□□□ -0.99
LIG1-209ENST00000596104 TMEM201Q5SNT2 666 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 PDSS1Q5T2R2 415 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 NOXRED1Q6NXP6 359 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 C8orf74Q6P047 294 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 IKBIPQ70UQ0 350 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 TRIM46Q7Z4K8 759 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 SLC22A9Q8IVM8 553 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 MISPQ8IVT2 679 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 TUSC5Q8IXB3 177 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 LILRA2Q8N149 483 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 CEP112Q8N8E3 955 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 CDRT4Q8N9R6 151 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 SLC16A11Q8NCK7 471 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 HSD17B8Q92506 261 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 KISS1RQ969F8 398 aaPredicted RBP8.85□□□□□ -0.99
LIG1-209ENST00000596104 GIMAP5Q96F15 307 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 ZNF764Q96H86 408 aaPredicted RBP8.85□□□□□ -0.99
LIG1-209ENST00000596104 SH3YL1Q96HL8 342 aaPredicted RBP8.85□□□□□ -0.99
LIG1-209ENST00000596104 USB1Q9BQ65 265 aaKnown RBP8.85□□□□□ -0.99
LIG1-209ENST00000596104 POTEKPQ9BYX7 375 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 BARX1Q9HBU1 254 aaPredicted RBP8.85□□□□□ -0.99
LIG1-209ENST00000596104 GP6Q9HCN6 339 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 MID1IP1Q9NPA3 183 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 CCL27Q9Y4X3 112 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 SNX8Q9Y5X2 465 aa8.85□□□□□ -0.99
LIG1-209ENST00000596104 IGHV4-30-2A0A087WSY4 118 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 A0A1W2PQD3 144 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 SHISA9B4DS77 424 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 NPIPB8E9PQR5 432 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 PHF1O43189 567 aaPredicted RBP8.84□□□□□ -0.99
LIG1-209ENST00000596104 GPRIN2O60269 458 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 RAMP1O60894 148 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms