RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 IL3P08700 152 aa12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 IL11P20809 199 aa12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 TIA1P31483 386 aaKnown RBP eCLIP12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 EIF1AXP47813 144 aaKnown RBP12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 EMDP50402 254 aa12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 ACSM2AQ08AH3 577 aa12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 MAP4K2Q12851 820 aa12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 LTB4RQ15722 352 aa12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 NRF1Q16656 503 aa12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 FAM174BQ3ZCQ3 159 aa12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 ACSM2BQ68CK6 577 aa12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 MFSD12Q6NUT3 480 aa12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 GALNT18Q6P9A2 607 aa12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 FIGNL1Q6PIW4 674 aa12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 DTX2Q86UW9 622 aa12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 STEAP2Q8NFT2 490 aa12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 TMEM109Q9BVC6 243 aa12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 FAIM2Q9BWQ8 316 aa12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 GATA5Q9BWX5 397 aaPredicted RBP12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 EBPLQ9BY08 206 aa12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 SHCBP1LQ9BZQ2 653 aa12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 STMN4Q9H169 189 aaPredicted RBP12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 SLC17A7Q9P2U7 560 aa12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 KCNS2Q9ULS6 477 aa12.23□□□□□ -0.45
SHKBP1-208ENST00000595726 GNG14A0A1W2PPG7 69 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 GOLGA6L10A6NI86 522 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 TO15178 435 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 SCO2O43819 266 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 SPAG7O75391 227 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 CRCPO75575 148 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 ATP1B1P05026 303 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 UROSP10746 265 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 ITGA2P17301 1181 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 USF1P22415 310 aaPredicted RBP12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 ADH6P28332 368 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 DEKP35659 375 aaKnown RBP12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 ALDH9A1P49189 494 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 CORO7P57737 925 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 DSCR9P59020 149 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 RPS3AP61247 264 aaKnown RBP12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 MRPS35P82673 323 aaKnown RBP12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 LSM11P83369 360 aaKnown RBP eCLIP12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 STX5Q13190 355 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 CLEC6AQ6EIG7 209 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 FAM166AQ6J272 317 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 SEZ6L2Q6UXD5 910 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 LARP4Q71RC2 724 aaKnown RBP eCLIP12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 TRIM46Q7Z4K8 759 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 GGNQ86UU5 652 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 METTL25Q8N6Q8 603 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 FADS6Q8N9I5 356 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 TCP10LQ8TDR4 215 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 GFM2Q969S9 779 aaKnown RBP12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 KLHL29Q96CT2 875 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 MSI2Q96DH6 328 aaKnown RBP12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 CNRIP1Q96F85 164 aaPredicted RBP12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 SLC35A4Q96G79 324 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 GMPPAQ96IJ6 420 aaPredicted RBP12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 ADAD1Q96M93 576 aaKnown RBP12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 MECRQ9BV79 373 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 RTN4RQ9BZR6 473 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 OR10A4Q9H209 315 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 FBXO34Q9NWN3 711 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 SIRT5Q9NXA8 310 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 PPP4R1LQ9P1A2 415 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 CFL2Q9Y281 166 aa12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 GPR55Q9Y2T6 319 aaPredicted RBP12.22□□□□□ -0.45
SHKBP1-208ENST00000595726 PCNX3Q9H6A9 2034 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 SHISA9B4DS77 424 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 EIF1AYO14602 144 aaKnown RBP12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 GMFGO60234 142 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 KIAA0513O60268 411 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 TRIM13O60858 407 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 GCM2O75603 506 aaPredicted RBP12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 RSL1D1O76021 490 aaKnown RBP12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 LY6HO94772 140 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 FCGR2AP12318 317 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 CREB1P16220 341 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 SLC25A16P16260 332 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 PCSK2P16519 638 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 CSNK2A2P19784 350 aaPredicted RBP12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 ALDH3A1P30838 453 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 BTKQ06187 659 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 SQLEQ14534 574 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 IMPG1Q17R60 797 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 SPDYAQ5MJ70 313 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 PIWIL2Q8TC59 973 aaKnown RBP12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 C10orf105Q8TEF2 133 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 C16orf78Q8WTQ4 265 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 RNF138Q8WVD3 245 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 FAM168AQ92567 244 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 EFHD2Q96C19 240 aaPredicted RBP12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 ZNF681Q96N22 645 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 TRMOQ9BU70 441 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 GRIP2Q9C0E4 1043 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 NGBQ9NPG2 151 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 FANCFQ9NPI8 374 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 FLRT3Q9NZU0 649 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 UTS2RQ9UKP6 389 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 PSME2Q9UL46 239 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms