RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 SCARB2Q14108 478 aa14.37□□□□□ -0.11
PNKP-204ENST00000594661 UBXN2BQ14CS0 331 aa14.37□□□□□ -0.11
PNKP-204ENST00000594661 SF3A2Q15428 464 aaKnown RBP14.37□□□□□ -0.11
PNKP-204ENST00000594661 MED22Q15528 200 aa14.37□□□□□ -0.11
PNKP-204ENST00000594661 SLC5A12Q1EHB4 618 aa14.37□□□□□ -0.11
PNKP-204ENST00000594661 PRRT3Q5FWE3 981 aa14.37□□□□□ -0.11
PNKP-204ENST00000594661 BICRALQ6AI39 1079 aa14.37□□□□□ -0.11
PNKP-204ENST00000594661 TRIM40Q6P9F5 258 aa14.37□□□□□ -0.11
PNKP-204ENST00000594661 Q7L0L9 218 aa14.37□□□□□ -0.11
PNKP-204ENST00000594661 NUDT13Q86X67 352 aa14.37□□□□□ -0.11
PNKP-204ENST00000594661 SFTPA2Q8IWL1 248 aa14.37□□□□□ -0.11
PNKP-204ENST00000594661 NFKBIDQ8NI38 313 aa14.37□□□□□ -0.11
PNKP-204ENST00000594661 UCN3Q969E3 161 aa14.37□□□□□ -0.11
PNKP-204ENST00000594661 RGMAQ96B86 450 aa14.37□□□□□ -0.11
PNKP-204ENST00000594661 C7orf34Q96L11 122 aa14.37□□□□□ -0.11
PNKP-204ENST00000594661 TEFMQ96QE5 360 aaKnown RBP14.37□□□□□ -0.11
PNKP-204ENST00000594661 KCNJ15Q99712 375 aa14.37□□□□□ -0.11
PNKP-204ENST00000594661 SOSTQ9BQB4 213 aa14.37□□□□□ -0.11
PNKP-204ENST00000594661 KLHL31Q9H511 634 aa14.37□□□□□ -0.11
PNKP-204ENST00000594661 SYNDIG1Q9H7V2 258 aa14.37□□□□□ -0.11
PNKP-204ENST00000594661 SEC14L4Q9UDX3 406 aa14.37□□□□□ -0.11
PNKP-204ENST00000594661 TINAGQ9UJW2 476 aa14.37□□□□□ -0.11
PNKP-204ENST00000594661 AP1M2Q9Y6Q5 423 aa14.37□□□□□ -0.11
PNKP-204ENST00000594661 LRIT2A6NDA9 550 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 LINC00587B1AMM8 73 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 DNASE2O00115 360 aaPredicted RBP14.36□□□□□ -0.11
PNKP-204ENST00000594661 SLC2A2P11168 524 aaPredicted RBP14.36□□□□□ -0.11
PNKP-204ENST00000594661 CMPK1P30085 196 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 CRYBB2P43320 205 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 NUDT6P53370 316 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 SELENOWP63302 87 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 ILF3Q12906 894 aaKnown RBP eCLIP14.36□□□□□ -0.11
PNKP-204ENST00000594661 ZIC1Q15915 447 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 ZNF628Q5EBL2 1059 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 DDI2Q5TDH0 399 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 SPPL2AQ8TCT8 520 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 PHF21AQ96BD5 680 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 CDX2Q99626 313 aaPredicted RBP14.36□□□□□ -0.11
PNKP-204ENST00000594661 ORAI3Q9BRQ5 295 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 FOXQ1Q9C009 403 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 MED28Q9H204 178 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 SRMSQ9H3Y6 488 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 EXOSC4Q9NPD3 245 aaKnown RBP14.36□□□□□ -0.11
PNKP-204ENST00000594661 THUMPD1Q9NXG2 353 aaKnown RBP14.36□□□□□ -0.11
PNKP-204ENST00000594661 PLEKHB1Q9UF11 243 aaPredicted RBP14.36□□□□□ -0.11
PNKP-204ENST00000594661 TMCC3Q9ULS5 477 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 KCNK7Q9Y2U2 307 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 ARHGEF17Q96PE2 2063 aaPredicted RBP14.36□□□□□ -0.11
PNKP-204ENST00000594661 TMEM229AB2RXF0 380 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 SLC30A4O14863 429 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 TNFP01375 233 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 IL1AP01583 271 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 THEGLP0DJG4 465 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 ANXA3P12429 323 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 ALDH9A1P49189 494 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 TGM4P49221 684 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 DOC2BQ14184 412 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 IQCCQ4KMZ1 466 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 ZNF425Q6IV72 752 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 ZNF793Q6ZN11 406 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 ZNF605Q86T29 641 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 SLC34A3Q8N130 599 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 ZNF655Q8N720 491 aaPredicted RBP14.36□□□□□ -0.11
PNKP-204ENST00000594661 ATP6V1C2Q8NEY4 427 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 OR8D4Q8NGM9 314 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 GPBAR1Q8TDU6 330 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 PPP1R3EQ9H7J1 279 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 C1GALT1Q9NS00 363 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 TEX10Q9NXF1 929 aaPredicted RBP14.36□□□□□ -0.11
PNKP-204ENST00000594661 SLCO1C1Q9NYB5 712 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 TAS2R16Q9NYV7 291 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 C5AR2Q9P296 337 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 USP34Q70CQ2 3546 aa14.36□□□□□ -0.11
PNKP-204ENST00000594661 IGHV1OR15-9A0A0B4J2B8 117 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 SPTY2D1-AS1A0A0U1RR47 76 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 HYKKA2RU49 373 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 C7orf66A4D0T2 115 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 SGK494L7N484 410 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 PTBP1P26599 531 aaKnown RBP eCLIP14.35□□□□□ -0.11
PNKP-204ENST00000594661 SSTR4P31391 388 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 ZNF81P51508 661 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 AKR1D1P51857 326 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 RBBP4Q09028 425 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 GPR18Q14330 331 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 FZD2Q14332 565 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 TSC22D1Q15714 1073 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 OR4C11Q6IEV9 310 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 GPR153Q6NV75 609 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 OR4D10Q8NGI6 311 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 FLVCR1-AS1Q8TAF5 88 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 SLC6A18Q96N87 628 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 TMEM43Q9BTV4 400 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 TMEM38AQ9H6F2 299 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 DDX31Q9H8H2 851 aaKnown RBP14.35□□□□□ -0.11
PNKP-204ENST00000594661 SLAMF7Q9NQ25 335 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 GPR27Q9NS67 375 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 ZNF226Q9NYT6 803 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 CNOT2Q9NZN8 540 aaKnown RBP14.35□□□□□ -0.11
PNKP-204ENST00000594661 PADI2Q9Y2J8 665 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 A0A0A6YYD5 115 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms