RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 FREM3P0C091 2139 aa15.85■□□□□ 0.13
SHKBP1-203ENST00000594298 UQCRHLA0A096LP55 91 aa15.85■□□□□ 0.13
SHKBP1-203ENST00000594298 MSTNO14793 375 aa15.85■□□□□ 0.13
SHKBP1-203ENST00000594298 CASKO14936 926 aa15.85■□□□□ 0.13
SHKBP1-203ENST00000594298 TSPAN2O60636 221 aa15.85■□□□□ 0.13
SHKBP1-203ENST00000594298 NME6O75414 186 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-203ENST00000594298 KCNH1O95259 989 aa15.85■□□□□ 0.13
SHKBP1-203ENST00000594298 C6orf47O95873 294 aa15.85■□□□□ 0.13
SHKBP1-203ENST00000594298 CRHP06850 196 aa15.85■□□□□ 0.13
SHKBP1-203ENST00000594298 KRT16P08779 473 aa15.85■□□□□ 0.13
SHKBP1-203ENST00000594298 IDO1P14902 403 aa15.85■□□□□ 0.13
SHKBP1-203ENST00000594298 EFNA1P20827 205 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-203ENST00000594298 GABRA3P34903 492 aa15.85■□□□□ 0.13
SHKBP1-203ENST00000594298 CCT3P49368 545 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-203ENST00000594298 STARP49675 285 aa15.85■□□□□ 0.13
SHKBP1-203ENST00000594298 PLXDC2Q6UX71 529 aa15.85■□□□□ 0.13
SHKBP1-203ENST00000594298 GRAMD2AQ8IUY3 354 aa15.85■□□□□ 0.13
SHKBP1-203ENST00000594298 ARFGAP2Q8N6H7 521 aa15.85■□□□□ 0.13
SHKBP1-203ENST00000594298 OR56A1Q8NGH5 318 aa15.85■□□□□ 0.13
SHKBP1-203ENST00000594298 PSMA8Q8TAA3 256 aa15.85■□□□□ 0.13
SHKBP1-203ENST00000594298 GPR151Q8TDV0 419 aa15.85■□□□□ 0.13
SHKBP1-203ENST00000594298 SFXN2Q96NB2 322 aa15.85■□□□□ 0.13
SHKBP1-203ENST00000594298 ZCCHC3Q9NUD5 404 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-203ENST00000594298 ABCA2Q9BZC7 2435 aa15.85■□□□□ 0.13
SHKBP1-203ENST00000594298 PRSS51A0A1B0GVH4 220 aa15.84■□□□□ 0.13
SHKBP1-203ENST00000594298 A0A1W2PNV4 684 aa15.84■□□□□ 0.13
SHKBP1-203ENST00000594298 RNASET2O00584 256 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-203ENST00000594298 ZIC3O60481 467 aa15.84■□□□□ 0.13
SHKBP1-203ENST00000594298 NKX2-2O95096 273 aa15.84■□□□□ 0.13
SHKBP1-203ENST00000594298 ALOX5P09917 674 aa15.84■□□□□ 0.13
SHKBP1-203ENST00000594298 ADSLP30566 484 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-203ENST00000594298 S100A3P33764 101 aa15.84■□□□□ 0.13
SHKBP1-203ENST00000594298 CLK3P49761 638 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-203ENST00000594298 GAS1P54826 345 aa15.84■□□□□ 0.13
SHKBP1-203ENST00000594298 LRRC74AQ0VAA2 488 aa15.84■□□□□ 0.13
SHKBP1-203ENST00000594298 GSTA3Q16772 222 aa15.84■□□□□ 0.13
SHKBP1-203ENST00000594298 SLC9B1Q4ZJI4 515 aa15.84■□□□□ 0.13
SHKBP1-203ENST00000594298 OR4F3Q6IEY1 312 aa15.84■□□□□ 0.13
SHKBP1-203ENST00000594298 EPGNQ6UW88 154 aa15.84■□□□□ 0.13
SHKBP1-203ENST00000594298 LRRC75A-AS1Q8N1F1 130 aa15.84■□□□□ 0.13
SHKBP1-203ENST00000594298 GLB1L3Q8NCI6 653 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-203ENST00000594298 SFXN5Q8TD22 340 aa15.84■□□□□ 0.13
SHKBP1-203ENST00000594298 SLC9A6Q92581 669 aa15.84■□□□□ 0.13
SHKBP1-203ENST00000594298 FAM120BQ96EK7 910 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-203ENST00000594298 PIP5K1AQ99755 562 aa15.84■□□□□ 0.13
SHKBP1-203ENST00000594298 ZNF446Q9NWS9 450 aa15.84■□□□□ 0.13
SHKBP1-203ENST00000594298 DOCK7Q96N67 2140 aa15.83■□□□□ 0.13
SHKBP1-203ENST00000594298 VPS13CQ709C8 3753 aa15.83■□□□□ 0.13
SHKBP1-203ENST00000594298 FAM171A2A8MVW0 826 aa15.83■□□□□ 0.12
SHKBP1-203ENST00000594298 ANKRD28O15084 1053 aa15.83■□□□□ 0.12
SHKBP1-203ENST00000594298 UBDO15205 165 aa15.83■□□□□ 0.12
SHKBP1-203ENST00000594298 ATP8B1O43520 1251 aa15.83■□□□□ 0.12
SHKBP1-203ENST00000594298 IL33O95760 270 aa15.83■□□□□ 0.12
SHKBP1-203ENST00000594298 TGM6O95932 706 aa15.83■□□□□ 0.12
SHKBP1-203ENST00000594298 ALDOCP09972 364 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-203ENST00000594298 TP53BP2Q13625 1128 aa15.83■□□□□ 0.12
SHKBP1-203ENST00000594298 OR2A2Q6IF42 318 aa15.83■□□□□ 0.12
SHKBP1-203ENST00000594298 MFSD12Q6NUT3 480 aa15.83■□□□□ 0.12
SHKBP1-203ENST00000594298 OR4N2Q8NGD1 307 aa15.83■□□□□ 0.12
SHKBP1-203ENST00000594298 HOXB13Q92826 284 aaPredicted RBP15.83■□□□□ 0.12
SHKBP1-203ENST00000594298 EFHD2Q96C19 240 aaPredicted RBP15.83■□□□□ 0.12
SHKBP1-203ENST00000594298 STARD4Q96DR4 205 aa15.83■□□□□ 0.12
SHKBP1-203ENST00000594298 CXorf36Q9H7Y0 433 aa15.83■□□□□ 0.12
SHKBP1-203ENST00000594298 HHATLQ9HCP6 504 aa15.83■□□□□ 0.12
SHKBP1-203ENST00000594298 SLCO1B3Q9NPD5 702 aa15.83■□□□□ 0.12
SHKBP1-203ENST00000594298 SDHAF3Q9NRP4 125 aa15.83■□□□□ 0.12
SHKBP1-203ENST00000594298 SIRT3Q9NTG7 399 aaPredicted RBP15.83■□□□□ 0.12
SHKBP1-203ENST00000594298 DKKL1Q9UK85 242 aa15.83■□□□□ 0.12
SHKBP1-203ENST00000594298 FAF1Q9UNN5 650 aaPredicted RBP15.83■□□□□ 0.12
SHKBP1-203ENST00000594298 GPR45Q9Y5Y3 372 aa15.83■□□□□ 0.12
SHKBP1-203ENST00000594298 MAP1AP78559 2803 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 B4DXG7 233 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 E9PBE3 544 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 ZNF195O14628 629 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 POLR3GO15318 223 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 ARHGEF9O43307 516 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 HMGN2P05204 90 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 HEXAP06865 529 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 DPP4P27487 766 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 CPOXP36551 454 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 MAP3K8P41279 467 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 DSCR4P56555 118 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 NME5P56597 212 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 B3GALT5-AS1P59052 145 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 UFM1P61960 85 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 FAM27E3Q08E93 113 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 PDCD4Q53EL6 469 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 CLEC9AQ6UXN8 241 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 ADAMTS15Q8TE58 950 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 NUDT8Q8WV74 236 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 JADE3Q92613 823 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 PIGTQ969N2 578 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 ARSGQ96EG1 525 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 GIMAP5Q96F15 307 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 CHMP6Q96FZ7 201 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 STACQ99469 402 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 ACTRT3Q9BYD9 372 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 MED4Q9NPJ6 270 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 FAM120CQ9NX05 1096 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms