RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 SHOXO15266 292 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 CEACAM5P06731 702 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 ERVK-21P61565 698 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 ADAM15Q13444 863 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 AGERQ15109 404 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 PDGFRLQ15198 375 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 TMEM44Q2T9K0 475 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 TJAP1Q5JTD0 557 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 MTSS1LQ765P7 747 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 SIX5Q8N196 739 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 MFSD9Q8NBP5 474 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 OR4M2Q8NGB6 313 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 GANCQ8TET4 914 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 CHFRQ96EP1 664 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 SIRT4Q9Y6E7 314 aaPredicted RBP15.36■□□□□ 0.05
LIG1-206ENST00000594067 A0A0A6YYJ9 748 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 GTPBP1O00178 669 aaKnown RBP15.36■□□□□ 0.05
LIG1-206ENST00000594067 LANCL1O43813 399 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 OR5F1O95221 314 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 PAHP00439 452 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 M6PRP20645 277 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 CFL1P23528 166 aaKnown RBP15.36■□□□□ 0.05
LIG1-206ENST00000594067 CMPK1P30085 196 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 BTG1P62324 171 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 HTRA3P83110 453 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 ACSM1Q08AH1 577 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 CCDC85BQ15834 202 aaPredicted RBP15.36■□□□□ 0.05
LIG1-206ENST00000594067 CCNJQ5T5M9 372 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 IDNKQ5T6J7 187 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 ZBTB37Q5TC79 503 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 SMARCD3Q6STE5 483 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 ZNF836Q6ZNA1 936 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 NR2C2APQ86WQ0 139 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 DNAJC5GQ8N7S2 189 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 SRFBP1Q8NEF9 429 aaKnown RBP15.36■□□□□ 0.05
LIG1-206ENST00000594067 TIMM29Q9BSF4 260 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 DPH1Q9BZG8 443 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 UBQLN3Q9H347 655 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 MED17Q9NVC6 651 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 ASB6Q9NWX5 421 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 MAT2BQ9NZL9 334 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 PHF11Q9UIL8 331 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 POLHQ9Y253 713 aa15.36■□□□□ 0.05
LIG1-206ENST00000594067 SNRNP200O75643 2136 aaKnown RBP15.35■□□□□ 0.05
LIG1-206ENST00000594067 GPR89AB7ZAQ6 455 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 GPR89BP0CG08 455 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 HK1P19367 917 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 CSTF1Q05048 431 aaKnown RBP15.35■□□□□ 0.05
LIG1-206ENST00000594067 CEBPEQ15744 281 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 RPE65Q16518 533 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 PLA1AQ53H76 456 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 MFSD12Q6NUT3 480 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 PSRC1Q6PGN9 363 aaPredicted RBP15.35■□□□□ 0.05
LIG1-206ENST00000594067 VITQ6UXI7 678 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 GHDCQ8N2G8 530 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 OR8H1Q8NGG4 311 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 SMARCD2Q92925 531 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 NLGN3Q9NZ94 848 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 EXTL2Q9UBQ6 330 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 WDR45Q9Y484 360 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 RNF13O43567 381 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 CHP2O43745 196 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 SLC19A2O60779 497 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 TSC22D2O75157 780 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 RFPL3O75679 317 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 HMGN1P05114 100 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 ZGLP1P0C6A0 271 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 ZNF888P0CJ79 500 aaPredicted RBP15.35■□□□□ 0.05
LIG1-206ENST00000594067 TFPIP10646 304 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 AP2S1P53680 142 aaPredicted RBP15.35■□□□□ 0.05
LIG1-206ENST00000594067 FCN2Q15485 313 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 GPR68Q15743 365 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 ANKRD54Q6NXT1 300 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 IL20RBQ6UXL0 311 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 TMEM99Q8N816 258 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 OR4E2Q8NGC2 313 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 C10orf90Q96M02 699 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 UBL7Q96S82 380 aaPredicted RBP15.35■□□□□ 0.05
LIG1-206ENST00000594067 ENKD1Q9H0I2 346 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 PRKAG2Q9UGJ0 569 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 ADAM30Q9UKF2 790 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 STON1Q9Y6Q2 735 aa15.35■□□□□ 0.05
LIG1-206ENST00000594067 SCN3AQ9NY46 2000 aa15.34■□□□□ 0.05
LIG1-206ENST00000594067 DENND4AQ7Z401 1863 aa15.34■□□□□ 0.05
LIG1-206ENST00000594067 KAT7O95251 611 aa15.34■□□□□ 0.05
LIG1-206ENST00000594067 PRG2P13727 222 aa15.34■□□□□ 0.05
LIG1-206ENST00000594067 PAICSP22234 425 aaKnown RBP15.34■□□□□ 0.05
LIG1-206ENST00000594067 HEPHL1Q6MZM0 1159 aa15.34■□□□□ 0.05
LIG1-206ENST00000594067 ZNF782Q6ZMW2 699 aaPredicted RBP15.34■□□□□ 0.05
LIG1-206ENST00000594067 FGF13Q92913 245 aa15.34■□□□□ 0.05
LIG1-206ENST00000594067 GPR137Q96N19 417 aa15.34■□□□□ 0.05
LIG1-206ENST00000594067 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.34■□□□□ 0.05
LIG1-206ENST00000594067 HDHD2Q9H0R4 259 aa15.34■□□□□ 0.05
LIG1-206ENST00000594067 OR52D1Q9H346 318 aa15.34■□□□□ 0.05
LIG1-206ENST00000594067 FOLH1BQ9HBA9 442 aa15.34■□□□□ 0.05
LIG1-206ENST00000594067 BTN3A3O00478 584 aa15.34■□□□□ 0.05
LIG1-206ENST00000594067 GKN3PP0CG01 181 aa15.34■□□□□ 0.05
LIG1-206ENST00000594067 ATP12AP54707 1039 aa15.34■□□□□ 0.05
LIG1-206ENST00000594067 DUSP5Q16690 384 aa15.34■□□□□ 0.05
LIG1-206ENST00000594067 C2orf27AQ580R0 203 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms