RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 AQP8O94778 261 aa13.22□□□□□ -0.29
PNKP-202ENST00000593706 KCNH1O95259 989 aa13.22□□□□□ -0.29
PNKP-202ENST00000593706 IL33O95760 270 aa13.22□□□□□ -0.29
PNKP-202ENST00000593706 DHRS4L1P0CG22 281 aa13.22□□□□□ -0.29
PNKP-202ENST00000593706 PPP3CBP16298 524 aa13.22□□□□□ -0.29
PNKP-202ENST00000593706 FRKP42685 505 aaPredicted RBP13.22□□□□□ -0.29
PNKP-202ENST00000593706 RPL38P63173 70 aaKnown RBP13.22□□□□□ -0.29
PNKP-202ENST00000593706 MPP2Q14168 576 aa13.22□□□□□ -0.29
PNKP-202ENST00000593706 GUSBP1Q15486 140 aa13.22□□□□□ -0.29
PNKP-202ENST00000593706 ZNF385BQ569K4 471 aa13.22□□□□□ -0.29
PNKP-202ENST00000593706 ZNF704Q6ZNC4 412 aaPredicted RBP13.22□□□□□ -0.29
PNKP-202ENST00000593706 EXOC3L1Q86VI1 746 aa13.22□□□□□ -0.29
PNKP-202ENST00000593706 OR6K3Q8NGY3 331 aa13.22□□□□□ -0.29
PNKP-202ENST00000593706 SLC9A6Q92581 669 aa13.22□□□□□ -0.29
PNKP-202ENST00000593706 RTN4RQ9BZR6 473 aa13.22□□□□□ -0.29
PNKP-202ENST00000593706 CXorf56Q9H5V9 222 aa13.22□□□□□ -0.29
PNKP-202ENST00000593706 C3orf14Q9HBI5 128 aa13.22□□□□□ -0.29
PNKP-202ENST00000593706 EQTNQ9NQ60 294 aa13.22□□□□□ -0.29
PNKP-202ENST00000593706 MCTS1Q9ULC4 181 aaKnown RBP13.22□□□□□ -0.29
PNKP-202ENST00000593706 CLEC4AQ9UMR7 237 aa13.22□□□□□ -0.29
PNKP-202ENST00000593706 C19orf53Q9UNZ5 99 aaPredicted RBP13.22□□□□□ -0.29
PNKP-202ENST00000593706 TMED5Q9Y3A6 229 aa13.22□□□□□ -0.29
PNKP-202ENST00000593706 FIS1Q9Y3D6 152 aa13.22□□□□□ -0.29
PNKP-202ENST00000593706 ANK3Q12955 4377 aaKnown RBP13.21□□□□□ -0.29
PNKP-202ENST00000593706 UPK1AO00322 258 aa13.21□□□□□ -0.29
PNKP-202ENST00000593706 RGS16O15492 202 aaPredicted RBP13.21□□□□□ -0.29
PNKP-202ENST00000593706 UTS2O95399 124 aa13.21□□□□□ -0.29
PNKP-202ENST00000593706 ANGPTL1O95841 491 aa13.21□□□□□ -0.29
PNKP-202ENST00000593706 CHEK2O96017 543 aa13.21□□□□□ -0.29
PNKP-202ENST00000593706 TUBBP07437 444 aa13.21□□□□□ -0.29
PNKP-202ENST00000593706 LOXP28300 417 aaPredicted RBP13.21□□□□□ -0.29
PNKP-202ENST00000593706 SERPINB4P48594 390 aa13.21□□□□□ -0.29
PNKP-202ENST00000593706 NR1H2P55055 460 aa13.21□□□□□ -0.29
PNKP-202ENST00000593706 OCRLQ01968 901 aa13.21□□□□□ -0.29
PNKP-202ENST00000593706 C17orf67Q0P5P2 114 aa13.21□□□□□ -0.29
PNKP-202ENST00000593706 GLYR1Q49A26 553 aaPredicted RBP13.21□□□□□ -0.29
PNKP-202ENST00000593706 C22orf34Q6ZV56 151 aa13.21□□□□□ -0.29
PNKP-202ENST00000593706 GGNQ86UU5 652 aa13.21□□□□□ -0.29
PNKP-202ENST00000593706 WFDC8Q8IUA0 241 aa13.21□□□□□ -0.29
PNKP-202ENST00000593706 HOXB13Q92826 284 aaPredicted RBP13.21□□□□□ -0.29
PNKP-202ENST00000593706 GMPPAQ96IJ6 420 aaPredicted RBP13.21□□□□□ -0.29
PNKP-202ENST00000593706 PKNOX2Q96KN3 472 aa13.21□□□□□ -0.29
PNKP-202ENST00000593706 C3orf30Q96M34 536 aa13.21□□□□□ -0.29
PNKP-202ENST00000593706 ZIM3Q96PE6 472 aa13.21□□□□□ -0.29
PNKP-202ENST00000593706 MDFIQ99750 246 aa13.21□□□□□ -0.29
PNKP-202ENST00000593706 EML4Q9HC35 981 aaKnown RBP13.21□□□□□ -0.29
PNKP-202ENST00000593706 GIMAP2Q9UG22 337 aa13.21□□□□□ -0.29
PNKP-202ENST00000593706 ZDHHC2Q9UIJ5 367 aa13.21□□□□□ -0.29
PNKP-202ENST00000593706 CADP27708 2225 aa13.21□□□□□ -0.29
PNKP-202ENST00000593706 SYNGR4O95473 234 aa13.2□□□□□ -0.3
PNKP-202ENST00000593706 THBDP07204 575 aa13.2□□□□□ -0.3
PNKP-202ENST00000593706 BCKDHAP12694 445 aa13.2□□□□□ -0.3
PNKP-202ENST00000593706 ZNF17P17021 662 aa13.2□□□□□ -0.3
PNKP-202ENST00000593706 ATP5J2P56134 94 aa13.2□□□□□ -0.3
PNKP-202ENST00000593706 GRAMD1BQ3KR37 738 aa13.2□□□□□ -0.3
PNKP-202ENST00000593706 ALKBH2Q6NS38 261 aa13.2□□□□□ -0.3
PNKP-202ENST00000593706 ANKRD26P1Q6NSI1 321 aa13.2□□□□□ -0.3
PNKP-202ENST00000593706 SZRD1Q7Z422 152 aa13.2□□□□□ -0.3
PNKP-202ENST00000593706 STK32CQ86UX6 486 aa13.2□□□□□ -0.3
PNKP-202ENST00000593706 WDR75Q8IWA0 830 aaKnown RBP13.2□□□□□ -0.3
PNKP-202ENST00000593706 HOMEZQ8IX15 550 aa13.2□□□□□ -0.3
PNKP-202ENST00000593706 OR10D3Q8NH80 312 aa13.2□□□□□ -0.3
PNKP-202ENST00000593706 AGR3Q8TD06 166 aa13.2□□□□□ -0.3
PNKP-202ENST00000593706 CIDECQ96AQ7 238 aaPredicted RBP13.2□□□□□ -0.3
PNKP-202ENST00000593706 ELP4Q96EB1 424 aa13.2□□□□□ -0.3
PNKP-202ENST00000593706 PLPPR2Q96GM1 343 aa13.2□□□□□ -0.3
PNKP-202ENST00000593706 TSSK3Q96PN8 268 aa13.2□□□□□ -0.3
PNKP-202ENST00000593706 LMF2Q9BU23 707 aaKnown RBP13.2□□□□□ -0.3
PNKP-202ENST00000593706 ACTR6Q9GZN1 396 aa13.2□□□□□ -0.3
PNKP-202ENST00000593706 REEP4Q9H6H4 257 aa13.2□□□□□ -0.3
PNKP-202ENST00000593706 PAQR5Q9NXK6 330 aaPredicted RBP13.2□□□□□ -0.3
PNKP-202ENST00000593706 NTMQ9P121 344 aa13.2□□□□□ -0.3
PNKP-202ENST00000593706 BAIAP2L1Q9UHR4 511 aa13.2□□□□□ -0.3
PNKP-202ENST00000593706 ACTL7BQ9Y614 415 aa13.2□□□□□ -0.3
PNKP-202ENST00000593706 PLCE1Q9P212 2302 aa13.19□□□□□ -0.3
PNKP-202ENST00000593706 HS3ST1O14792 307 aa13.19□□□□□ -0.3
PNKP-202ENST00000593706 BIRC5O15392 142 aa13.19□□□□□ -0.3
PNKP-202ENST00000593706 ITM2AO43736 263 aa13.19□□□□□ -0.3
PNKP-202ENST00000593706 SS18L1O75177 396 aaPredicted RBP13.19□□□□□ -0.3
PNKP-202ENST00000593706 LYPLA1O75608 230 aaPredicted RBP13.19□□□□□ -0.3
PNKP-202ENST00000593706 ME2P23368 584 aa13.19□□□□□ -0.3
PNKP-202ENST00000593706 GABRA3P34903 492 aa13.19□□□□□ -0.3
PNKP-202ENST00000593706 GPC1P35052 558 aa13.19□□□□□ -0.3
PNKP-202ENST00000593706 MAP3K8P41279 467 aa13.19□□□□□ -0.3
PNKP-202ENST00000593706 SLC6A8P48029 635 aa13.19□□□□□ -0.3
PNKP-202ENST00000593706 ZNF41P51814 821 aaPredicted RBP13.19□□□□□ -0.3
PNKP-202ENST00000593706 PRR5P85299 388 aa13.19□□□□□ -0.3
PNKP-202ENST00000593706 HSPB3Q12988 150 aa13.19□□□□□ -0.3
PNKP-202ENST00000593706 GALNTL6Q49A17 601 aa13.19□□□□□ -0.3
PNKP-202ENST00000593706 CEP85LQ5SZL2 805 aa13.19□□□□□ -0.3
PNKP-202ENST00000593706 STAC2Q6ZMT1 411 aa13.19□□□□□ -0.3
PNKP-202ENST00000593706 BEND4Q6ZU67 534 aa13.19□□□□□ -0.3
PNKP-202ENST00000593706 ZNF551Q7Z340 670 aaPredicted RBP13.19□□□□□ -0.3
PNKP-202ENST00000593706 DDIASQ8IXT1 998 aa13.19□□□□□ -0.3
PNKP-202ENST00000593706 CLHC1Q8NHS4 586 aa13.19□□□□□ -0.3
PNKP-202ENST00000593706 GPR151Q8TDV0 419 aa13.19□□□□□ -0.3
PNKP-202ENST00000593706 PIK3R3Q92569 461 aa13.19□□□□□ -0.3
PNKP-202ENST00000593706 C20orf27Q9GZN8 174 aa13.19□□□□□ -0.3
PNKP-202ENST00000593706 C12orf49Q9H741 205 aa13.19□□□□□ -0.3
PNKP-202ENST00000593706 PLSCR4Q9NRQ2 329 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms