RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 OR5D16Q8NGK9 328 aa12.5□□□□□ -0.41
APOC1-208ENST00000592535 LINC01560Q8TB33 94 aa12.5□□□□□ -0.41
APOC1-208ENST00000592535 MGARPQ8TDB4 240 aa12.5□□□□□ -0.41
APOC1-208ENST00000592535 FAM222BQ8WU58 562 aa12.5□□□□□ -0.41
APOC1-208ENST00000592535 ZNF845Q96IR2 970 aaPredicted RBP12.5□□□□□ -0.41
APOC1-208ENST00000592535 GPATCH1Q9BRR8 931 aaKnown RBP12.5□□□□□ -0.41
APOC1-208ENST00000592535 RBM24Q9BX46 236 aaKnown RBP12.5□□□□□ -0.41
APOC1-208ENST00000592535 DPY30Q9C005 99 aa12.5□□□□□ -0.41
APOC1-208ENST00000592535 PIGMQ9H3S5 423 aa12.5□□□□□ -0.41
APOC1-208ENST00000592535 SERHL2Q9H4I8 314 aa12.5□□□□□ -0.41
APOC1-208ENST00000592535 MEAF6Q9HAF1 191 aa12.5□□□□□ -0.41
APOC1-208ENST00000592535 HHATLQ9HCP6 504 aa12.5□□□□□ -0.41
APOC1-208ENST00000592535 MED17Q9NVC6 651 aa12.5□□□□□ -0.41
APOC1-208ENST00000592535 DNAJB12Q9NXW2 375 aaKnown RBP12.5□□□□□ -0.41
APOC1-208ENST00000592535 GALNT8Q9NY28 637 aa12.5□□□□□ -0.41
APOC1-208ENST00000592535 PACSIN3Q9UKS6 424 aa12.5□□□□□ -0.41
APOC1-208ENST00000592535 HEATR5AQ86XA9 2040 aa12.49□□□□□ -0.41
APOC1-208ENST00000592535 A0A087WZY1 265 aa12.49□□□□□ -0.41
APOC1-208ENST00000592535 FAM221AA4D161 298 aa12.49□□□□□ -0.41
APOC1-208ENST00000592535 TUBAL3A6NHL2 446 aa12.49□□□□□ -0.41
APOC1-208ENST00000592535 RNASET2O00584 256 aaKnown RBP12.49□□□□□ -0.41
APOC1-208ENST00000592535 ANKRD28O15084 1053 aa12.49□□□□□ -0.41
APOC1-208ENST00000592535 OIP5O43482 229 aa12.49□□□□□ -0.41
APOC1-208ENST00000592535 TNFRSF21O75509 655 aa12.49□□□□□ -0.41
APOC1-208ENST00000592535 ZNF17P17021 662 aa12.49□□□□□ -0.41
APOC1-208ENST00000592535 LBPP18428 481 aa12.49□□□□□ -0.41
APOC1-208ENST00000592535 CPA2P48052 419 aa12.49□□□□□ -0.41
APOC1-208ENST00000592535 ZNF41P51814 821 aaPredicted RBP12.49□□□□□ -0.41
APOC1-208ENST00000592535 RPS3AP61247 264 aaKnown RBP12.49□□□□□ -0.41
APOC1-208ENST00000592535 PHC1P78364 1004 aa12.49□□□□□ -0.41
APOC1-208ENST00000592535 SORDQ00796 357 aa12.49□□□□□ -0.41
APOC1-208ENST00000592535 ZNF117Q03924 483 aa12.49□□□□□ -0.41
APOC1-208ENST00000592535 PON3Q15166 354 aa12.49□□□□□ -0.41
APOC1-208ENST00000592535 PLPPR5Q32ZL2 321 aa12.49□□□□□ -0.41
APOC1-208ENST00000592535 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.49□□□□□ -0.41
APOC1-208ENST00000592535 OR2A2Q6IF42 318 aa12.49□□□□□ -0.41
APOC1-208ENST00000592535 VWA1Q6PCB0 445 aa12.49□□□□□ -0.41
APOC1-208ENST00000592535 MISPQ8IVT2 679 aa12.49□□□□□ -0.41
APOC1-208ENST00000592535 GTPBP8Q8N3Z3 284 aaPredicted RBP12.49□□□□□ -0.41
APOC1-208ENST00000592535 METTL25Q8N6Q8 603 aa12.49□□□□□ -0.41
APOC1-208ENST00000592535 OR8J2Q8NGG1 315 aa12.49□□□□□ -0.41
APOC1-208ENST00000592535 B4GALNT2Q8NHY0 566 aa12.49□□□□□ -0.41
APOC1-208ENST00000592535 FNDC9Q8TBE3 224 aa12.49□□□□□ -0.41
APOC1-208ENST00000592535 PHOSPHO1Q8TCT1 267 aa12.49□□□□□ -0.41
APOC1-208ENST00000592535 POLDIP3Q9BY77 421 aaKnown RBP12.49□□□□□ -0.41
APOC1-208ENST00000592535 OTOGQ6ZRI0 2925 aa12.49□□□□□ -0.41
APOC1-208ENST00000592535 CCDC168Q8NDH2 2452 aa12.49□□□□□ -0.41
APOC1-208ENST00000592535 TACC2O95359 2948 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 SPG11Q96JI7 2443 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 UQCRHLA0A096LP55 91 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 RNF103-CHMP3A0A140T963 221 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 A6NNC1 897 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 A8MXE2 369 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 SDHDO14521 159 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 EIF1AYO14602 144 aaKnown RBP12.48□□□□□ -0.41
APOC1-208ENST00000592535 SCN2BO60939 215 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 ERLIN1O75477 346 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 CPSF4O95639 269 aaKnown RBP12.48□□□□□ -0.41
APOC1-208ENST00000592535 OPN1LWP04000 364 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 CRHP06850 196 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 H2AFXP16104 143 aaPredicted RBP12.48□□□□□ -0.41
APOC1-208ENST00000592535 MATN1P21941 496 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 PSMA4P25789 261 aaKnown RBP12.48□□□□□ -0.41
APOC1-208ENST00000592535 ATP12AP54707 1039 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 MAGOHP61326 146 aaKnown RBP12.48□□□□□ -0.41
APOC1-208ENST00000592535 EEF1A1P68104 462 aaKnown RBP12.48□□□□□ -0.41
APOC1-208ENST00000592535 SIRPAP78324 504 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 KLHL26Q53HC5 615 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 BEND6Q5SZJ8 279 aaPredicted RBP12.48□□□□□ -0.41
APOC1-208ENST00000592535 EEF1A1P5Q5VTE0 462 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 BHLHB9Q6PI77 547 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 C6orf120Q7Z4R8 191 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 MTERF4Q7Z6M4 381 aaKnown RBP12.48□□□□□ -0.41
APOC1-208ENST00000592535 ANKRD46Q86W74 232 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 LRRC34Q8IZ02 419 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 CNEP1R1Q8N9A8 125 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 OR4A15Q8NGL6 344 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 POC1BQ8TC44 478 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 ACTRT2Q8TDY3 377 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 ZBTB8AQ96BR9 441 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 TESCQ96BS2 214 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 STARD4Q96DR4 205 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 SLC35G5Q96KT7 338 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 RNF145Q96MT1 663 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 HOXD1Q9GZZ0 328 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 CLEC4MQ9H2X3 399 aaPredicted RBP12.48□□□□□ -0.41
APOC1-208ENST00000592535 RNF122Q9H9V4 155 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 RASSF1Q9NS23 344 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 ZNF175Q9Y473 711 aa12.48□□□□□ -0.41
APOC1-208ENST00000592535 AKAP6Q13023 2319 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 C7orf72A4D263 438 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 NPIPB9F8W1W9 429 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 SNNO75324 88 aaPredicted RBP12.47□□□□□ -0.41
APOC1-208ENST00000592535 SMNDC1O75940 238 aaKnown RBP eCLIP12.47□□□□□ -0.41
APOC1-208ENST00000592535 AQP8O94778 261 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 SOX30O94993 753 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 ALDOCP09972 364 aaKnown RBP12.47□□□□□ -0.41
APOC1-208ENST00000592535 LINGO3P0C6S8 592 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 EPXP11678 715 aa12.47□□□□□ -0.41
APOC1-208ENST00000592535 IL11P20809 199 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms