RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 MGARPQ8TDB4 240 aa18.17■□□□□ 0.5
CIRBP-239ENST00000592467 ACTRT2Q8TDY3 377 aa18.17■□□□□ 0.5
CIRBP-239ENST00000592467 DPY30Q9C005 99 aa18.17■□□□□ 0.5
CIRBP-239ENST00000592467 MED17Q9NVC6 651 aa18.17■□□□□ 0.5
CIRBP-239ENST00000592467 THAP1Q9NVV9 213 aa18.17■□□□□ 0.5
CIRBP-239ENST00000592467 FOXD3Q9UJU5 478 aaPredicted RBP18.17■□□□□ 0.5
CIRBP-239ENST00000592467 FAF1Q9UNN5 650 aaPredicted RBP18.17■□□□□ 0.5
CIRBP-239ENST00000592467 VDAC3Q9Y277 283 aa18.17■□□□□ 0.5
CIRBP-239ENST00000592467 AP4B1Q9Y6B7 739 aa18.17■□□□□ 0.5
CIRBP-239ENST00000592467 A0A087WZY1 265 aa18.16■□□□□ 0.5
CIRBP-239ENST00000592467 A0A1W2PNV4 684 aa18.16■□□□□ 0.5
CIRBP-239ENST00000592467 CFLARO15519 480 aa18.16■□□□□ 0.5
CIRBP-239ENST00000592467 ERLIN1O75477 346 aa18.16■□□□□ 0.5
CIRBP-239ENST00000592467 C1QCP02747 245 aa18.16■□□□□ 0.5
CIRBP-239ENST00000592467 KRT16P08779 473 aa18.16■□□□□ 0.5
CIRBP-239ENST00000592467 IL12AP29459 219 aa18.16■□□□□ 0.5
CIRBP-239ENST00000592467 KIR2DL3P43628 341 aa18.16■□□□□ 0.5
CIRBP-239ENST00000592467 MYBPHQ13203 477 aa18.16■□□□□ 0.5
CIRBP-239ENST00000592467 CASP8Q14790 479 aa18.16■□□□□ 0.5
CIRBP-239ENST00000592467 SPANXN4Q5MJ08 99 aa18.16■□□□□ 0.5
CIRBP-239ENST00000592467 C6orf120Q7Z4R8 191 aa18.16■□□□□ 0.5
CIRBP-239ENST00000592467 MISPQ8IVT2 679 aa18.16■□□□□ 0.5
CIRBP-239ENST00000592467 ZZZ3Q8IYH5 903 aa18.16■□□□□ 0.5
CIRBP-239ENST00000592467 GTPBP8Q8N3Z3 284 aaPredicted RBP18.16■□□□□ 0.5
CIRBP-239ENST00000592467 MEIOBQ8N635 442 aa18.16■□□□□ 0.5
CIRBP-239ENST00000592467 CHDHQ8NE62 594 aaPredicted RBP18.16■□□□□ 0.5
CIRBP-239ENST00000592467 ZNF524Q96C55 264 aa18.16■□□□□ 0.5
CIRBP-239ENST00000592467 ZNF845Q96IR2 970 aaPredicted RBP18.16■□□□□ 0.5
CIRBP-239ENST00000592467 ADGRG7Q96K78 797 aa18.16■□□□□ 0.5
CIRBP-239ENST00000592467 SDF2Q99470 211 aa18.16■□□□□ 0.5
CIRBP-239ENST00000592467 AIG1Q9NVV5 245 aa18.16■□□□□ 0.5
CIRBP-239ENST00000592467 MPDZO75970 2070 aa18.16■□□□□ 0.5
CIRBP-239ENST00000592467 HEATR5AQ86XA9 2040 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 PRSS51A0A1B0GVH4 220 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 SLC22A20A6NK97 555 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 EEF1E1-BLOC1S5C9J1V9 151 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 SCDO00767 359 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 HDAC3O15379 428 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 SEC14L5O43304 696 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 EEF1E1O43324 174 aaKnown RBP18.15■□□□□ 0.5
CIRBP-239ENST00000592467 CTAG2O75638 210 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 SOX30O94993 753 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 LINGO3P0C6S8 592 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 SOAT1P35610 550 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 PEX19P40855 299 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 ATP12AP54707 1039 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 ZNF117Q03924 483 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 GUSBP1Q15486 140 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 CTU2Q2VPK5 515 aaKnown RBP18.15■□□□□ 0.5
CIRBP-239ENST00000592467 FLYWCH1Q4VC44 716 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 CBLN3Q6UW01 205 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 MAVSQ7Z434 540 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 MTERF4Q7Z6M4 381 aaKnown RBP18.15■□□□□ 0.5
CIRBP-239ENST00000592467 ANKRD46Q86W74 232 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 WDR75Q8IWA0 830 aaKnown RBP18.15■□□□□ 0.5
CIRBP-239ENST00000592467 B4GALNT2Q8NHY0 566 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 RAB3IL1Q8TBN0 382 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 MIPOL1Q8TD10 442 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 SH3YL1Q96HL8 342 aaPredicted RBP18.15■□□□□ 0.5
CIRBP-239ENST00000592467 MAELQ96JY0 434 aaKnown RBP18.15■□□□□ 0.5
CIRBP-239ENST00000592467 WDR55Q9H6Y2 383 aaPredicted RBP18.15■□□□□ 0.5
CIRBP-239ENST00000592467 RNF122Q9H9V4 155 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 HHATLQ9HCP6 504 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 KCNE5Q9UJ90 142 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 ICAM5Q9UMF0 924 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 GPR45Q9Y5Y3 372 aa18.15■□□□□ 0.5
CIRBP-239ENST00000592467 CCDC168Q8NDH2 2452 aa18.14■□□□□ 0.5
CIRBP-239ENST00000592467 RNF103-CHMP3A0A140T963 221 aa18.14■□□□□ 0.49
CIRBP-239ENST00000592467 ZNF195O14628 629 aa18.14■□□□□ 0.49
CIRBP-239ENST00000592467 MATN1P21941 496 aa18.14■□□□□ 0.49
CIRBP-239ENST00000592467 EPHA3P29320 983 aa18.14■□□□□ 0.49
CIRBP-239ENST00000592467 KIR2DL2P43627 348 aaPredicted RBP18.14■□□□□ 0.49
CIRBP-239ENST00000592467 RNF144AP50876 292 aaPredicted RBP18.14■□□□□ 0.49
CIRBP-239ENST00000592467 EEFSECP57772 596 aaKnown RBP18.14■□□□□ 0.49
CIRBP-239ENST00000592467 UFM1P61960 85 aa18.14■□□□□ 0.49
CIRBP-239ENST00000592467 SORDQ00796 357 aa18.14■□□□□ 0.49
CIRBP-239ENST00000592467 TESK1Q15569 626 aa18.14■□□□□ 0.49
CIRBP-239ENST00000592467 AP1ARQ63HQ0 302 aa18.14■□□□□ 0.49
CIRBP-239ENST00000592467 HEPHL1Q6MZM0 1159 aa18.14■□□□□ 0.49
CIRBP-239ENST00000592467 OLIG3Q7RTU3 272 aa18.14■□□□□ 0.49
CIRBP-239ENST00000592467 OR4A15Q8NGL6 344 aa18.14■□□□□ 0.49
CIRBP-239ENST00000592467 FNDC9Q8TBE3 224 aa18.14■□□□□ 0.49
CIRBP-239ENST00000592467 ARL8AQ96BM9 186 aa18.14■□□□□ 0.49
CIRBP-239ENST00000592467 ZBTB8AQ96BR9 441 aa18.14■□□□□ 0.49
CIRBP-239ENST00000592467 STARD4Q96DR4 205 aa18.14■□□□□ 0.49
CIRBP-239ENST00000592467 CHMP6Q96FZ7 201 aa18.14■□□□□ 0.49
CIRBP-239ENST00000592467 PINK1Q9BXM7 581 aa18.14■□□□□ 0.49
CIRBP-239ENST00000592467 HOXD1Q9GZZ0 328 aa18.14■□□□□ 0.49
CIRBP-239ENST00000592467 ACBD3Q9H3P7 528 aa18.14■□□□□ 0.49
CIRBP-239ENST00000592467 MARCOQ9UEW3 520 aaPredicted RBP18.14■□□□□ 0.49
CIRBP-239ENST00000592467 ZNF175Q9Y473 711 aa18.14■□□□□ 0.49
CIRBP-239ENST00000592467 SPG11Q96JI7 2443 aa18.14■□□□□ 0.49
CIRBP-239ENST00000592467 CENPVL1A0A0U1RR11 272 aa18.13■□□□□ 0.49
CIRBP-239ENST00000592467 A8MXE2 369 aa18.13■□□□□ 0.49
CIRBP-239ENST00000592467 E9PBE3 544 aa18.13■□□□□ 0.49
CIRBP-239ENST00000592467 EFNA2O43921 213 aa18.13■□□□□ 0.49
CIRBP-239ENST00000592467 FCMRO60667 390 aa18.13■□□□□ 0.49
CIRBP-239ENST00000592467 CRHP06850 196 aa18.13■□□□□ 0.49
CIRBP-239ENST00000592467 HPGDP15428 266 aa18.13■□□□□ 0.49
CIRBP-239ENST00000592467 IL11P20809 199 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms