RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 PLIN3O60664 434 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 HCN1O60741 890 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 WDR1O75083 606 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 ERN1O75460 977 aaKnown RBP7.5□□□□□ -1.21
DNMT1-219ENST00000589349 CLPSP04118 112 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 ATP1B1P05026 303 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 ABCB1P08183 1280 aaPredicted RBP7.5□□□□□ -1.21
DNMT1-219ENST00000589349 LINC00032P0C843 101 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 UROSP10746 265 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 GABRA1P14867 456 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 GPX3P22352 226 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 TNFRSF8P28908 595 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 UQCRC1P31930 480 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 CASP3P42574 277 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 ZFP36L2P47974 494 aaKnown RBP7.5□□□□□ -1.21
DNMT1-219ENST00000589349 NAA20P61599 178 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 DCAF7P61962 342 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 ZNF763Q0D2J5 394 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 FOXO1Q12778 655 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 STX5Q13190 355 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 ZNHIT3Q15649 155 aaPredicted RBP7.5□□□□□ -1.21
DNMT1-219ENST00000589349 ADRM1Q16186 407 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 OR5M10Q6IEU7 315 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 PPP4R4Q6NUP7 873 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 TMEM107Q6UX40 140 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 CHMP1BQ7LBR1 199 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 NUP54Q7Z3B4 507 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 YRDCQ86U90 279 aaKnown RBP7.5□□□□□ -1.21
DNMT1-219ENST00000589349 TMEM200AQ86VY9 491 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 SIMC1Q8NDZ2 872 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 ADIPOR1Q96A54 375 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 HSPBAP1Q96EW2 488 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 LRRC46Q96FV0 321 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 COL21A1Q96P44 957 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 FAM111AQ96PZ2 611 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 TRIB1Q96RU8 372 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 DMRTA2Q96SC8 542 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 OSBPL11Q9BXB4 747 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 TXLNGYQ9BZA5 131 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 LRTM1Q9HBL6 345 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 EML4Q9HC35 981 aaKnown RBP7.5□□□□□ -1.21
DNMT1-219ENST00000589349 GALNT9Q9HCQ5 603 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 EQTNQ9NQ60 294 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 SERHLQ9NQF3 203 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 DDX18Q9NVP1 670 aaKnown RBP7.5□□□□□ -1.21
DNMT1-219ENST00000589349 TAS2R9Q9NYW1 312 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 SH3BP4Q9P0V3 963 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 SPRR3Q9UBC9 169 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 DKKL1Q9UK85 242 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 CES1P1Q9UKY3 287 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 EMCNQ9ULC0 261 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 DTX4Q9Y2E6 619 aa7.5□□□□□ -1.21
DNMT1-219ENST00000589349 hCG_2014768A0A024R1R8 64 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 WDR91A4D1P6 747 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 ALG1L2C9J202 215 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 H0Y3Z8 333 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 H3BQF6 201 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 ADAM10O14672 748 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 AZIN1O14977 448 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 ACOX3O15254 700 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 SCO2O43819 266 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 ICOSLGO75144 302 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 COQ9O75208 318 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 UGT2B11O75310 529 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 SLU7O95391 586 aaKnown RBP7.49□□□□□ -1.21
DNMT1-219ENST00000589349 IGHG3P01860 377 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 DDCP20711 480 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 DRD5P21918 477 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 SSTR2P30874 369 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 PTGER4P35408 488 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 PPICP45877 212 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 MTNR1BP49286 362 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 CLK3P49761 638 aaKnown RBP7.49□□□□□ -1.21
DNMT1-219ENST00000589349 AGFG1P52594 562 aaKnown RBP7.49□□□□□ -1.21
DNMT1-219ENST00000589349 DNAJB13P59910 316 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 VSNL1P62760 191 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 RPL38P63173 70 aaKnown RBP7.49□□□□□ -1.21
DNMT1-219ENST00000589349 RAE1P78406 368 aaKnown RBP7.49□□□□□ -1.21
DNMT1-219ENST00000589349 MRPS22P82650 360 aaKnown RBP7.49□□□□□ -1.21
DNMT1-219ENST00000589349 TLE4Q04727 773 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 HSPB3Q12988 150 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 RCAN2Q14206 197 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 SF3B4Q15427 424 aaKnown RBP eCLIP7.49□□□□□ -1.216e-7■■■□□ 16.8
DNMT1-219ENST00000589349 MST1LQ2TV78 715 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 EIPR1Q53HC9 387 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 MBNL2Q5VZF2 373 aaKnown RBP7.49□□□□□ -1.21
DNMT1-219ENST00000589349 ANKRD26P1Q6NSI1 321 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 NOXRED1Q6NXP6 359 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 SLC30A6Q6NXT4 461 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 CHERPQ8IWX8 916 aaKnown RBP7.49□□□□□ -1.21
DNMT1-219ENST00000589349 PM20D2Q8IYS1 436 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 CLYBLQ8N0X4 340 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 MARVELD2Q8N4S9 558 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 EIF1ADQ8N9N8 165 aaKnown RBP7.49□□□□□ -1.21
DNMT1-219ENST00000589349 OR4K17Q8NGC6 315 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 LILRB4Q8NHJ6 448 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 CLHC1Q8NHS4 586 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 NEIL3Q8TAT5 605 aa7.49□□□□□ -1.21
DNMT1-219ENST00000589349 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.49□□□□□ -1.21
DNMT1-219ENST00000589349 JADE3Q92613 823 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms