RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 MAGP20916 626 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 GALP22466 123 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 HTR1FP30939 366 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 CAPZA2P47755 286 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 PDX1P52945 283 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 SRP54P61011 504 aaKnown RBP6.89□□□□□ -1.31
ZNF540-206ENST00000589117 PSPHP78330 225 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 PRRT3Q5FWE3 981 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 C22orf42Q6IC83 251 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 ZNF544Q6NX49 715 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 SYCE2Q6PIF2 218 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 FAM131AQ6UXB0 335 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 FRRS1Q6ZNA5 592 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 GDF7Q7Z4P5 450 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 BCDIN3DQ7Z5W3 292 aaKnown RBP6.89□□□□□ -1.31
ZNF540-206ENST00000589117 HMGN2P46Q86SG4 172 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 TRIM73Q86UV7 250 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 COMTD1Q86VU5 262 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 KIF18BQ86Y91 864 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 NRMQ8IXM6 262 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 ZNF619Q8N2I2 560 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 COX18Q8N8Q8 333 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 OR7G2Q8NG99 324 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 OR52N1Q8NH53 320 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 CDS1Q92903 461 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 KIAA1143Q96AT1 154 aaPredicted RBP6.89□□□□□ -1.31
ZNF540-206ENST00000589117 ZG16BQ96DA0 208 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 GIMAP5Q96F15 307 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 DIRAS2Q96HU8 199 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 OR2A5Q96R48 311 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 STACQ99469 402 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 SDF2Q99470 211 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 GPA33Q99795 319 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 KCNN2Q9H2S1 579 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 SLC28A3Q9HAS3 691 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 POLE3Q9NRF9 147 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 ERVK13-1Q9NX77 482 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 QPCTLQ9NXS2 382 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 KCMF1Q9P0J7 381 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 ZNF624Q9P2J8 865 aaPredicted RBP6.89□□□□□ -1.31
ZNF540-206ENST00000589117 TNFRSF10DQ9UBN6 386 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 ADAM30Q9UKF2 790 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 C19orf53Q9UNZ5 99 aaPredicted RBP6.89□□□□□ -1.31
ZNF540-206ENST00000589117 GPR52Q9Y2T5 361 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 SLC22A7Q9Y694 548 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 CDH10Q9Y6N8 788 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 HEATR5BQ9P2D3 2071 aa6.89□□□□□ -1.31
ZNF540-206ENST00000589117 NINQ8N4C6 2090 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 PLXND1Q9Y4D7 1925 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 TRDV1A0A1B0GX56 115 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 A0A1W2PQF6 199 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 ANKRD34BA5PLL1 514 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 OR6C74A6NCV1 312 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 AGRPO00253 132 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 CASKO14936 926 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 SHOXO15266 292 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 DYRK3O43781 588 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 PLOD3O60568 738 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 TMCC2O75069 709 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 ADAM11O75078 769 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 TNFP01375 233 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 ATP1B1P05026 303 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 ADRA2AP08913 450 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 SMIM10L1P0DMW3 83 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 GAAP10253 952 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 GNSP15586 552 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 UGT2B7P16662 529 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 POLR2CP19387 275 aaPredicted RBP6.88□□□□□ -1.31
ZNF540-206ENST00000589117 AK4P27144 223 aaPredicted RBP6.88□□□□□ -1.31
ZNF540-206ENST00000589117 TRHRP34981 398 aaPredicted RBP6.88□□□□□ -1.31
ZNF540-206ENST00000589117 PTGER1P34995 402 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 SLC1A3P43003 542 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 TPTEP56180 551 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 CLDN2P57739 230 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 PPP3R1P63098 170 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 MXD1Q05195 221 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 DUSP2Q05923 314 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 ACSM1Q08AH1 577 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 GPR50Q13585 617 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 ZNHIT3Q15649 155 aaPredicted RBP6.88□□□□□ -1.31
ZNF540-206ENST00000589117 LTB4RQ15722 352 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 GPR68Q15743 365 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 ZSWIM7Q19AV6 140 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 PGGHGQ32M88 737 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 FAM109BQ6ICB4 259 aaPredicted RBP6.88□□□□□ -1.31
ZNF540-206ENST00000589117 ARMC6Q6NXE6 501 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 KIAA1324Q6UXG2 1013 aaKnown RBP6.88□□□□□ -1.31
ZNF540-206ENST00000589117 ZNF620Q6ZNG0 422 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 GDPD3Q7L5L3 318 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 OLIG3Q7RTU3 272 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 OR10G6Q8NH81 332 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 ZCCHC10Q8TBK6 192 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 GPR151Q8TDV0 419 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 TMEM203Q969S6 136 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 TSACCQ96A04 125 aaPredicted RBP6.88□□□□□ -1.31
ZNF540-206ENST00000589117 SMIM10Q96HG1 83 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 C10orf90Q96M02 699 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 HS6ST2Q96MM7 605 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 OR2A14Q96R47 310 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 PLA2G12AQ9BZM1 189 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms