RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 SLC25A3Q00325 362 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 RBBP4Q09028 425 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 C17orf67Q0P5P2 114 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 NDUFAF6Q330K2 333 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 PRAMEF8Q5VWM4 474 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 PRAMEF7Q5VXH5 474 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 FAM109AQ8N4B1 249 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 OR2M3Q8NG83 312 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 SPATA9Q9BWV2 254 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 UBQLN3Q9H347 655 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 MTHFD2LQ9H903 347 aaPredicted RBP17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 AGPAT4Q9NRZ5 378 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 MED11Q9P086 117 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 SUCOQ9UBS9 1254 aaKnown RBP17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 B4GALT7Q9UBV7 327 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 NPIPA1Q9UND3 350 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 ZNF462Q96JM2 2506 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 ZNF407Q9C0G0 2248 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 CLDN24A6NM45 220 aa17.28■□□□□ 0.36
CLPTM1-209ENST00000588855 GMFGO60234 142 aa17.28■□□□□ 0.36
CLPTM1-209ENST00000588855 AQP1P29972 269 aa17.28■□□□□ 0.36
CLPTM1-209ENST00000588855 TDGF1P3P51864 188 aa17.28■□□□□ 0.36
CLPTM1-209ENST00000588855 FGFBP1Q14512 234 aa17.28■□□□□ 0.36
CLPTM1-209ENST00000588855 VMACQ2NL98 169 aa17.28■□□□□ 0.36
CLPTM1-209ENST00000588855 CMPK2Q5EBM0 449 aa17.28■□□□□ 0.36
CLPTM1-209ENST00000588855 MISPQ8IVT2 679 aa17.28■□□□□ 0.36
CLPTM1-209ENST00000588855 PEX5LQ8IYB4 626 aa17.28■□□□□ 0.36
CLPTM1-209ENST00000588855 FADS6Q8N9I5 356 aa17.28■□□□□ 0.36
CLPTM1-209ENST00000588855 HIPK4Q8NE63 616 aa17.28■□□□□ 0.36
CLPTM1-209ENST00000588855 OR4K17Q8NGC6 315 aa17.28■□□□□ 0.36
CLPTM1-209ENST00000588855 OIT3Q8WWZ8 545 aa17.28■□□□□ 0.36
CLPTM1-209ENST00000588855 PMM1Q92871 262 aa17.28■□□□□ 0.36
CLPTM1-209ENST00000588855 SH3YL1Q96HL8 342 aaPredicted RBP17.28■□□□□ 0.36
CLPTM1-209ENST00000588855 SLX1AQ9BQ83 275 aa17.28■□□□□ 0.36
CLPTM1-209ENST00000588855 DSN1Q9H410 356 aa17.28■□□□□ 0.36
CLPTM1-209ENST00000588855 ZDHHC11Q9H8X9 412 aa17.28■□□□□ 0.36
CLPTM1-209ENST00000588855 ABCD2Q9UBJ2 740 aa17.28■□□□□ 0.36
CLPTM1-209ENST00000588855 ANGPT4Q9Y264 503 aa17.28■□□□□ 0.36
CLPTM1-209ENST00000588855 HEATR5AQ86XA9 2040 aa17.28■□□□□ 0.36
CLPTM1-209ENST00000588855 IGLV3-32A0A0A0MS00 114 aa17.27■□□□□ 0.36
CLPTM1-209ENST00000588855 FAM220BPB1ANY3 271 aa17.27■□□□□ 0.36
CLPTM1-209ENST00000588855 H3BNH8 94 aa17.27■□□□□ 0.36
CLPTM1-209ENST00000588855 DBIP07108 87 aaKnown RBP17.27■□□□□ 0.36
CLPTM1-209ENST00000588855 PCGF2P35227 344 aa17.27■□□□□ 0.36
CLPTM1-209ENST00000588855 MNAT1P51948 309 aa17.27■□□□□ 0.36
CLPTM1-209ENST00000588855 PLAURQ03405 335 aa17.27■□□□□ 0.36
CLPTM1-209ENST00000588855 ZNF117Q03924 483 aa17.27■□□□□ 0.36
CLPTM1-209ENST00000588855 TLE1Q04724 770 aa17.27■□□□□ 0.36
CLPTM1-209ENST00000588855 LIPEQ05469 1076 aa17.27■□□□□ 0.36
CLPTM1-209ENST00000588855 IFNEQ86WN2 208 aa17.27■□□□□ 0.36
CLPTM1-209ENST00000588855 VRK2Q86Y07 508 aa17.27■□□□□ 0.36
CLPTM1-209ENST00000588855 PGAM4Q8N0Y7 254 aa17.27■□□□□ 0.36
CLPTM1-209ENST00000588855 OR52P1PQ8NH57 321 aa17.27■□□□□ 0.36
CLPTM1-209ENST00000588855 WDR60Q8WVS4 1066 aa17.27■□□□□ 0.36
CLPTM1-209ENST00000588855 REXO5Q96IC2 774 aaKnown RBP17.27■□□□□ 0.36
CLPTM1-209ENST00000588855 KLHDC3Q9BQ90 382 aa17.27■□□□□ 0.36
CLPTM1-209ENST00000588855 DEFB127Q9H1M4 99 aa17.27■□□□□ 0.36
CLPTM1-209ENST00000588855 SPAG4Q9NPE6 437 aa17.27■□□□□ 0.36
CLPTM1-209ENST00000588855 CARD8Q9Y2G2 431 aa17.27■□□□□ 0.36
CLPTM1-209ENST00000588855 LIPGQ9Y5X9 500 aa17.27■□□□□ 0.36
CLPTM1-209ENST00000588855 B2RBV5 119 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 HCRTR2O43614 444 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 BCAS1O75363 584 aaPredicted RBP17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 CBR3O75828 277 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 CSTAP01040 98 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 UBL4AP11441 157 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 IL7RP16871 459 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 PCBP3P57721 371 aaKnown RBP17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 TOMM20Q15388 145 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 CBLN3Q6UW01 205 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 RBM15BQ8NDT2 890 aaKnown RBP17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 OR2T12Q8NG77 320 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 TMEM181Q9P2C4 612 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 ZNF443Q9Y2A4 671 aaPredicted RBP17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 AP3M1Q9Y2T2 418 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 NBASA2RRP1 2371 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 DNAJC13O75165 2243 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 GTPBP1O00178 669 aaKnown RBP17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 ZNF264O43296 627 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 CDC40O60508 579 aaKnown RBP eCLIP17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 TRAPPC6AO75865 159 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 NID1P14543 1247 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 ETS2P15036 469 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 CPOXP36551 454 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 PGM1P36871 562 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 ADH7P40394 386 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 GSK3BP49841 420 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 KCNJ10P78508 379 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 LIN52Q52LA3 116 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 ERICH5Q6P6B1 374 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 C16orf89Q6UX73 402 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 ZNF836Q6ZNA1 936 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 RINLQ6ZS11 566 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 EIF3MQ7L2H7 374 aaKnown RBP17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 B4GALNT2Q8NHY0 566 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 GPR137Q96N19 417 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 RSPO3Q9BXY4 272 aaPredicted RBP17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 ALG2Q9H553 416 aa17.26■□□□□ 0.35
CLPTM1-209ENST00000588855 NDE1Q9NXR1 346 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms