RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 NDUFB5O43674 189 aa16.41■□□□□ 0.22
CCDC43-204ENST00000588687 KCNK2O95069 426 aa16.41■□□□□ 0.22
CCDC43-204ENST00000588687 TUBBP07437 444 aa16.41■□□□□ 0.22
CCDC43-204ENST00000588687 LINGO3P0C6S8 592 aa16.41■□□□□ 0.22
CCDC43-204ENST00000588687 PRPS2P11908 318 aa16.41■□□□□ 0.22
CCDC43-204ENST00000588687 PRPH2P23942 346 aa16.41■□□□□ 0.22
CCDC43-204ENST00000588687 RPS4XP62701 263 aaKnown RBP16.41■□□□□ 0.22
CCDC43-204ENST00000588687 HEPHL1Q6MZM0 1159 aa16.41■□□□□ 0.22
CCDC43-204ENST00000588687 ANKRD26P1Q6NSI1 321 aa16.41■□□□□ 0.22
CCDC43-204ENST00000588687 FBXO30Q8TB52 745 aa16.41■□□□□ 0.22
CCDC43-204ENST00000588687 GPR151Q8TDV0 419 aa16.41■□□□□ 0.22
CCDC43-204ENST00000588687 ABHD3Q8WU67 409 aa16.41■□□□□ 0.22
CCDC43-204ENST00000588687 IFT81Q8WYA0 676 aa16.41■□□□□ 0.22
CCDC43-204ENST00000588687 FCRL1Q96LA6 429 aa16.41■□□□□ 0.22
CCDC43-204ENST00000588687 C12orf49Q9H741 205 aa16.41■□□□□ 0.22
CCDC43-204ENST00000588687 LAMP3Q9UQV4 416 aa16.41■□□□□ 0.22
CCDC43-204ENST00000588687 PTGDR2Q9Y5Y4 395 aa16.41■□□□□ 0.22
CCDC43-204ENST00000588687 RNF223E7ERA6 249 aa16.4■□□□□ 0.22
CCDC43-204ENST00000588687 GOLGA8RI6L899 631 aa16.4■□□□□ 0.22
CCDC43-204ENST00000588687 PDPK1O15530 556 aa16.4■□□□□ 0.22
CCDC43-204ENST00000588687 GSTA1P08263 222 aa16.4■□□□□ 0.22
CCDC43-204ENST00000588687 DMTNQ08495 405 aa16.4■□□□□ 0.22
CCDC43-204ENST00000588687 PDE7AQ13946 482 aa16.4■□□□□ 0.22
CCDC43-204ENST00000588687 DUSP5Q16690 384 aa16.4■□□□□ 0.22
CCDC43-204ENST00000588687 IMPG1Q17R60 797 aa16.4■□□□□ 0.22
CCDC43-204ENST00000588687 CLEC12BQ2HXU8 276 aa16.4■□□□□ 0.22
CCDC43-204ENST00000588687 CPTPQ5TA50 214 aa16.4■□□□□ 0.22
CCDC43-204ENST00000588687 HBMQ6B0K9 141 aa16.4■□□□□ 0.22
CCDC43-204ENST00000588687 CDRT4Q8N9R6 151 aa16.4■□□□□ 0.22
CCDC43-204ENST00000588687 SLC16A11Q8NCK7 471 aa16.4■□□□□ 0.22
CCDC43-204ENST00000588687 ACMSDQ8TDX5 336 aa16.4■□□□□ 0.22
CCDC43-204ENST00000588687 KLHL15Q96M94 604 aa16.4■□□□□ 0.22
CCDC43-204ENST00000588687 MS4A4EQ96PG1 132 aa16.4■□□□□ 0.22
CCDC43-204ENST00000588687 REPIN1Q9BWE0 567 aaKnown RBP16.4■□□□□ 0.22
CCDC43-204ENST00000588687 SRXN1Q9BYN0 137 aa16.4■□□□□ 0.22
CCDC43-204ENST00000588687 STOML1Q9UBI4 398 aa16.4■□□□□ 0.22
CCDC43-204ENST00000588687 RNF115Q9Y4L5 304 aa16.4■□□□□ 0.22
CCDC43-204ENST00000588687 EFNA2O43921 213 aa16.39■□□□□ 0.21
CCDC43-204ENST00000588687 TBX19O60806 448 aa16.39■□□□□ 0.21
CCDC43-204ENST00000588687 SYNGR4O95473 234 aa16.39■□□□□ 0.21
CCDC43-204ENST00000588687 PRIM2P49643 509 aa16.39■□□□□ 0.21
CCDC43-204ENST00000588687 FOXF1Q12946 379 aa16.39■□□□□ 0.21
CCDC43-204ENST00000588687 VEZF1Q14119 521 aa16.39■□□□□ 0.21
CCDC43-204ENST00000588687 TSC22D1Q15714 1073 aa16.39■□□□□ 0.21
CCDC43-204ENST00000588687 TAB1Q15750 504 aa16.39■□□□□ 0.21
CCDC43-204ENST00000588687 ETFDHQ16134 617 aa16.39■□□□□ 0.21
CCDC43-204ENST00000588687 WHAMMP3Q1A5X7 153 aa16.39■□□□□ 0.21
CCDC43-204ENST00000588687 NCMAPQ5T1S8 102 aa16.39■□□□□ 0.21
CCDC43-204ENST00000588687 FIGNL1Q6PIW4 674 aa16.39■□□□□ 0.21
CCDC43-204ENST00000588687 ZYG11AQ6WRX3 759 aa16.39■□□□□ 0.21
CCDC43-204ENST00000588687 NUFIP2Q7Z417 695 aaKnown RBP16.39■□□□□ 0.21
CCDC43-204ENST00000588687 STK32CQ86UX6 486 aa16.39■□□□□ 0.21
CCDC43-204ENST00000588687 TRABD2AQ86V40 505 aa16.39■□□□□ 0.21
CCDC43-204ENST00000588687 CCNYL1Q8N7R7 359 aa16.39■□□□□ 0.21
CCDC43-204ENST00000588687 NEUROG1Q92886 237 aa16.39■□□□□ 0.21
CCDC43-204ENST00000588687 SH3YL1Q96HL8 342 aaPredicted RBP16.39■□□□□ 0.21
CCDC43-204ENST00000588687 METTL2AQ96IZ6 378 aaKnown RBP16.39■□□□□ 0.21
CCDC43-204ENST00000588687 COQ10BQ9H8M1 238 aa16.39■□□□□ 0.21
CCDC43-204ENST00000588687 KLHL13Q9P2N7 655 aa16.39■□□□□ 0.21
CCDC43-204ENST00000588687 MAGED1Q9Y5V3 778 aaPredicted RBP16.39■□□□□ 0.21
CCDC43-204ENST00000588687 PLCE1Q9P212 2302 aa16.39■□□□□ 0.21
CCDC43-204ENST00000588687 A0A1W2PQD3 144 aa16.38■□□□□ 0.21
CCDC43-204ENST00000588687 RIPK2O43353 540 aa16.38■□□□□ 0.21
CCDC43-204ENST00000588687 NTN1O95631 604 aa16.38■□□□□ 0.21
CCDC43-204ENST00000588687 PYGBP11216 843 aa16.38■□□□□ 0.21
CCDC43-204ENST00000588687 SDC1P18827 310 aa16.38■□□□□ 0.21
CCDC43-204ENST00000588687 ELK4P28324 431 aa16.38■□□□□ 0.21
CCDC43-204ENST00000588687 ZNF41P51814 821 aaPredicted RBP16.38■□□□□ 0.21
CCDC43-204ENST00000588687 PGGHGQ32M88 737 aa16.38■□□□□ 0.21
CCDC43-204ENST00000588687 VPS26BQ4G0F5 336 aa16.38■□□□□ 0.21
CCDC43-204ENST00000588687 NUP43Q8NFH3 380 aa16.38■□□□□ 0.21
CCDC43-204ENST00000588687 STEAP2Q8NFT2 490 aa16.38■□□□□ 0.21
CCDC43-204ENST00000588687 OR2T11Q8NH01 316 aa16.38■□□□□ 0.21
CCDC43-204ENST00000588687 ROBO4Q8WZ75 1007 aa16.38■□□□□ 0.21
CCDC43-204ENST00000588687 OSTF1Q92882 214 aa16.38■□□□□ 0.21
CCDC43-204ENST00000588687 FBXW5Q969U6 566 aa16.38■□□□□ 0.21
CCDC43-204ENST00000588687 ZNF524Q96C55 264 aa16.38■□□□□ 0.21
CCDC43-204ENST00000588687 OTUB1Q96FW1 271 aaPredicted RBP16.38■□□□□ 0.21
CCDC43-204ENST00000588687 CCT7Q99832 543 aa16.38■□□□□ 0.21
CCDC43-204ENST00000588687 HHATLQ9HCP6 504 aa16.38■□□□□ 0.21
CCDC43-204ENST00000588687 FANCFQ9NPI8 374 aa16.38■□□□□ 0.21
CCDC43-204ENST00000588687 ING1Q9UK53 422 aaPredicted RBP16.38■□□□□ 0.21
CCDC43-204ENST00000588687 UQCRHLA0A096LP55 91 aa16.37■□□□□ 0.21
CCDC43-204ENST00000588687 H3BQF6 201 aa16.37■□□□□ 0.21
CCDC43-204ENST00000588687 OIP5O43482 229 aa16.37■□□□□ 0.21
CCDC43-204ENST00000588687 IGHV4-39P01824 125 aa16.37■□□□□ 0.21
CCDC43-204ENST00000588687 PROCP04070 461 aa16.37■□□□□ 0.21
CCDC43-204ENST00000588687 LCN1P31025 176 aa16.37■□□□□ 0.21
CCDC43-204ENST00000588687 CDKN1AP38936 164 aa16.37■□□□□ 0.21
CCDC43-204ENST00000588687 MANFP55145 182 aaKnown RBP16.37■□□□□ 0.21
CCDC43-204ENST00000588687 ZNF117Q03924 483 aa16.37■□□□□ 0.21
CCDC43-204ENST00000588687 ZNF672Q499Z4 452 aaPredicted RBP16.37■□□□□ 0.21
CCDC43-204ENST00000588687 SFRP5Q5T4F7 317 aa16.37■□□□□ 0.21
CCDC43-204ENST00000588687 CCNJQ5T5M9 372 aa16.37■□□□□ 0.21
CCDC43-204ENST00000588687 DNAJC14Q6Y2X3 702 aaPredicted RBP16.37■□□□□ 0.21
CCDC43-204ENST00000588687 MISPQ8IVT2 679 aa16.37■□□□□ 0.21
CCDC43-204ENST00000588687 LILRA2Q8N149 483 aa16.37■□□□□ 0.21
CCDC43-204ENST00000588687 KBTBD8Q8NFY9 601 aa16.37■□□□□ 0.21
CCDC43-204ENST00000588687 OR6Y1Q8NGX8 325 aa16.37■□□□□ 0.21
CCDC43-204ENST00000588687 CCDC126Q96EE4 140 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms