RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 TNFSF11O14788 317 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 CXCL13O43927 109 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 HMGN2P05204 90 aaKnown RBP12.86□□□□□ -0.35
VMP1-206ENST00000587945 NPIPA8P0DM63 369 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 HPGDP15428 266 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 ZNF17P17021 662 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 IL11P20809 199 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 CRYGSP22914 178 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 PSMA4P25789 261 aaKnown RBP12.86□□□□□ -0.35
VMP1-206ENST00000587945 PCYT1AP49585 367 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 PRIM2P49643 509 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 VSNL1P62760 191 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 POU6F2P78424 691 aaPredicted RBP12.86□□□□□ -0.35
VMP1-206ENST00000587945 IFFO1Q0D2I5 559 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 PTGR1Q14914 329 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 CTU2Q2VPK5 515 aaKnown RBP12.86□□□□□ -0.35
VMP1-206ENST00000587945 PLPPR5Q32ZL2 321 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 XKR7Q5GH72 579 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 FAM214BQ7L5A3 538 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 CXorf67Q86X51 503 aaPredicted RBP12.86□□□□□ -0.35
VMP1-206ENST00000587945 WDR75Q8IWA0 830 aaKnown RBP12.86□□□□□ -0.35
VMP1-206ENST00000587945 KRTCAP2Q8N6L1 136 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 POC1BQ8TC44 478 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.86□□□□□ -0.35
VMP1-206ENST00000587945 CDS1Q92903 461 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 MTERF3Q96E29 417 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 ADGRG7Q96K78 797 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 PPP3R2Q96LZ3 170 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 HS3ST6Q96QI5 342 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 BTBD2Q9BX70 525 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 EML4Q9HC35 981 aaKnown RBP12.86□□□□□ -0.35
VMP1-206ENST00000587945 ZNF226Q9NYT6 803 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 ZDHHC2Q9UIJ5 367 aa12.86□□□□□ -0.35
VMP1-206ENST00000587945 MED12LQ86YW9 2145 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 A0A0J9YW62 118 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 TMEM114B3SHH9 223 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 OIP5O43482 229 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 SKAP2O75563 359 aaPredicted RBP12.85□□□□□ -0.35
VMP1-206ENST00000587945 C6orf47O95873 294 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 NUDT17P0C025 328 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 FCGR2AP12318 317 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 MAPK1P28482 360 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 SHC1P29353 583 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 SERPINB4P48594 390 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 ZNF41P51814 821 aaPredicted RBP12.85□□□□□ -0.35
VMP1-206ENST00000587945 OCRLQ01968 901 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 FGFBP1Q14512 234 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 MLC1Q15049 377 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 ATP6AP1LQ52LC2 224 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 C6orf136Q5SQH8 315 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 CPTPQ5TA50 214 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 IL23RQ5VWK5 629 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 ZCCHC12Q6PEW1 402 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 LRIG3Q6UXM1 1119 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 RIBC1Q8N443 379 aaPredicted RBP12.85□□□□□ -0.35
VMP1-206ENST00000587945 OR2V1Q8NHB1 315 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 B4GALNT2Q8NHY0 566 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 PHOSPHO1Q8TCT1 267 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 ACTRT2Q8TDY3 377 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 OR5P2Q8WZ92 322 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 ZBTB8AQ96BR9 441 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 SMR3AQ99954 134 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 PIGUQ9H490 435 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 CXorf36Q9H7Y0 433 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 UBTD1Q9HAC8 227 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 BEX4Q9NWD9 120 aaPredicted RBP12.85□□□□□ -0.35
VMP1-206ENST00000587945 STOML1Q9UBI4 398 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 LGALS13Q9UHV8 139 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 KCNE3Q9Y6H6 103 aa12.85□□□□□ -0.35
VMP1-206ENST00000587945 UQCRHLA0A096LP55 91 aa12.84□□□□□ -0.35
VMP1-206ENST00000587945 C7orf72A4D263 438 aa12.84□□□□□ -0.35
VMP1-206ENST00000587945 ADAMDEC1O15204 470 aa12.84□□□□□ -0.35
VMP1-206ENST00000587945 SYNGR4O95473 234 aa12.84□□□□□ -0.35
VMP1-206ENST00000587945 PLGP00747 810 aaPredicted RBP12.84□□□□□ -0.35
VMP1-206ENST00000587945 HOXB4P17483 251 aaPredicted RBP12.84□□□□□ -0.35
VMP1-206ENST00000587945 SFTPDP35247 375 aa12.84□□□□□ -0.35
VMP1-206ENST00000587945 CCT3P49368 545 aaKnown RBP12.84□□□□□ -0.35
VMP1-206ENST00000587945 CTBP2P56545 445 aa12.84□□□□□ -0.35
VMP1-206ENST00000587945 RAC1P63000 192 aa12.84□□□□□ -0.35
VMP1-206ENST00000587945 NKX6-1P78426 367 aaPredicted RBP12.84□□□□□ -0.35
VMP1-206ENST00000587945 FOXF1Q12946 379 aa12.84□□□□□ -0.35
VMP1-206ENST00000587945 TP53BP2Q13625 1128 aa12.84□□□□□ -0.35
VMP1-206ENST00000587945 SPDYE7PQ495Y7 208 aa12.84□□□□□ -0.35
VMP1-206ENST00000587945 HBMQ6B0K9 141 aa12.84□□□□□ -0.35
VMP1-206ENST00000587945 CDC73Q6P1J9 531 aa12.84□□□□□ -0.35
VMP1-206ENST00000587945 FNDC5Q8NAU1 212 aa12.84□□□□□ -0.35
VMP1-206ENST00000587945 ROBO4Q8WZ75 1007 aa12.84□□□□□ -0.35
VMP1-206ENST00000587945 GMPPAQ96IJ6 420 aaPredicted RBP12.84□□□□□ -0.35
VMP1-206ENST00000587945 MARK4Q96L34 752 aa12.84□□□□□ -0.35
VMP1-206ENST00000587945 STACQ99469 402 aa12.84□□□□□ -0.35
VMP1-206ENST00000587945 PLSCR4Q9NRQ2 329 aa12.84□□□□□ -0.35
VMP1-206ENST00000587945 DUSP22Q9NRW4 184 aa12.84□□□□□ -0.35
VMP1-206ENST00000587945 GPATCH2Q9NW75 528 aa12.84□□□□□ -0.35
VMP1-206ENST00000587945 MCTS1Q9ULC4 181 aaKnown RBP12.84□□□□□ -0.35
VMP1-206ENST00000587945 EMC9Q9Y3B6 208 aa12.84□□□□□ -0.35
VMP1-206ENST00000587945 A0A1W2PQD3 144 aa12.83□□□□□ -0.36
VMP1-206ENST00000587945 SS18L1O75177 396 aaPredicted RBP12.83□□□□□ -0.36
VMP1-206ENST00000587945 THBDP07204 575 aa12.83□□□□□ -0.36
VMP1-206ENST00000587945 BPGMP07738 259 aa12.83□□□□□ -0.36
VMP1-206ENST00000587945 LINGO3P0C6S8 592 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms