RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 CCDC126Q96EE4 140 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 TRMT61AQ96FX7 289 aaKnown RBP12.54□□□□□ -0.4
DNMT1-213ENST00000587604 EGLN2Q96KS0 407 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 RNF145Q96MT1 663 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 TACO1Q9BSH4 297 aaKnown RBP12.54□□□□□ -0.4
DNMT1-213ENST00000587604 C12orf49Q9H741 205 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 NTMQ9P121 344 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 DCDC2Q9UHG0 476 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 PLCE1Q9P212 2302 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 KCNK2O95069 426 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 HPGDP15428 266 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 LCN1P31025 176 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 GPC1P35052 558 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 IDUAP35475 653 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 PRKAG1P54619 331 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 DMTNQ08495 405 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 ZNF844Q08AG5 666 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 VEZF1Q14119 521 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 ALKBH2Q6NS38 261 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 FIGNL1Q6PIW4 674 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 TRABD2AQ86V40 505 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 LILRA2Q8N149 483 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 GABRG1Q8N1C3 465 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 GATSQ8NAP1 163 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 NOA1Q8NC60 698 aaKnown RBP12.53□□□□□ -0.4
DNMT1-213ENST00000587604 NUP43Q8NFH3 380 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 LILRB1Q8NHL6 650 aaPredicted RBP12.53□□□□□ -0.4
DNMT1-213ENST00000587604 POC1BQ8TC44 478 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 GIMAP5Q96F15 307 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 ZNF764Q96H86 408 aaPredicted RBP12.53□□□□□ -0.4
DNMT1-213ENST00000587604 REPIN1Q9BWE0 567 aaKnown RBP12.53□□□□□ -0.4
DNMT1-213ENST00000587604 TMEM185BQ9H7F4 350 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 NGBQ9NPG2 151 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 UBQLN4Q9NRR5 601 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 FBXO34Q9NWN3 711 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 RNF115Q9Y4L5 304 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 CCL27Q9Y4X3 112 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 SNX8Q9Y5X2 465 aa12.53□□□□□ -0.4
DNMT1-213ENST00000587604 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.53□□□□□ -0.4
DNMT1-213ENST00000587604 RNF223E7ERA6 249 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 NPIPB8E9PQR5 432 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 G3V2L1 256 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 SCDO00767 359 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 PDPK1O15530 556 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 SEC22BO75396 215 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 CRCPO75575 148 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 GCM2O75603 506 aaPredicted RBP12.52□□□□□ -0.41
DNMT1-213ENST00000587604 URI1O94763 535 aaPredicted RBP12.52□□□□□ -0.41
DNMT1-213ENST00000587604 CD3EP07766 207 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 SOD3P08294 240 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 DANCRP0C864 163 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 MYL2P10916 166 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 PYGBP11216 843 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 PRPH2P23942 346 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 EIF1P41567 113 aaKnown RBP12.52□□□□□ -0.41
DNMT1-213ENST00000587604 SERPINB4P48594 390 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 MANFP55145 182 aaKnown RBP12.52□□□□□ -0.41
DNMT1-213ENST00000587604 RNPS1Q15287 305 aaKnown RBP12.52□□□□□ -0.41
DNMT1-213ENST00000587604 TMEM201Q5SNT2 666 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 NCMAPQ5T1S8 102 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 SFRP5Q5T4F7 317 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 ZCCHC12Q6PEW1 402 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 ZYG11AQ6WRX3 759 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 FRMD7Q6ZUT3 714 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 ZAR1Q86SH2 424 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 CNPY4Q8N129 248 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 SLC16A11Q8NCK7 471 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 B4GALNT2Q8NHY0 566 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 ZFP28Q8NHY6 868 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 RNF128Q8TEB7 428 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 ROBO4Q8WZ75 1007 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 HSD17B8Q92506 261 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 FBXW5Q969U6 566 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 CPNE4Q96A23 557 aaPredicted RBP12.52□□□□□ -0.41
DNMT1-213ENST00000587604 CIDECQ96AQ7 238 aaPredicted RBP12.52□□□□□ -0.41
DNMT1-213ENST00000587604 ZBED6CLQ96FA7 236 aaPredicted RBP12.52□□□□□ -0.41
DNMT1-213ENST00000587604 SH3YL1Q96HL8 342 aaPredicted RBP12.52□□□□□ -0.41
DNMT1-213ENST00000587604 REXO5Q96IC2 774 aaKnown RBP12.52□□□□□ -0.41
DNMT1-213ENST00000587604 KLHL15Q96M94 604 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 MS4A4EQ96PG1 132 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 USB1Q9BQ65 265 aaKnown RBP12.52□□□□□ -0.41
DNMT1-213ENST00000587604 REG4Q9BYZ8 158 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 ESRP2Q9H6T0 727 aaKnown RBP12.52□□□□□ -0.41
DNMT1-213ENST00000587604 TIGARQ9NQ88 270 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 EMCNQ9ULC0 261 aa12.52□□□□□ -0.41
DNMT1-213ENST00000587604 A0A1W2PQD3 144 aa12.51□□□□□ -0.41
DNMT1-213ENST00000587604 TBX19O60806 448 aa12.51□□□□□ -0.41
DNMT1-213ENST00000587604 HSPA4LO95757 839 aa12.51□□□□□ -0.41
DNMT1-213ENST00000587604 LINGO3P0C6S8 592 aa12.51□□□□□ -0.41
DNMT1-213ENST00000587604 UROSP10746 265 aa12.51□□□□□ -0.41
DNMT1-213ENST00000587604 ACP2P11117 423 aa12.51□□□□□ -0.41
DNMT1-213ENST00000587604 ADH6P28332 368 aa12.51□□□□□ -0.41
DNMT1-213ENST00000587604 FRKP42685 505 aaPredicted RBP12.51□□□□□ -0.41
DNMT1-213ENST00000587604 TAB1Q15750 504 aa12.51□□□□□ -0.41
DNMT1-213ENST00000587604 ZNF239Q16600 458 aaKnown RBP12.51□□□□□ -0.41
DNMT1-213ENST00000587604 DUSP5Q16690 384 aa12.51□□□□□ -0.41
DNMT1-213ENST00000587604 ANKRD26P1Q6NSI1 321 aa12.51□□□□□ -0.41
DNMT1-213ENST00000587604 TFAP2EQ6VUC0 442 aa12.51□□□□□ -0.41
DNMT1-213ENST00000587604 DNAJC14Q6Y2X3 702 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms