RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 MICAQ29983 383 aa9.39□□□□□ -0.91
APOC1-201ENST00000586638 RFX4Q33E94 735 aa9.39□□□□□ -0.91
APOC1-201ENST00000586638 COLEC12Q5KU26 742 aa9.39□□□□□ -0.91
APOC1-201ENST00000586638 FAM199XQ6PEV8 388 aaPredicted RBP9.39□□□□□ -0.91
APOC1-201ENST00000586638 INO80CQ6PI98 192 aaPredicted RBP9.39□□□□□ -0.91
APOC1-201ENST00000586638 IGF2-ASQ6U949 168 aa9.39□□□□□ -0.91
APOC1-201ENST00000586638 USP51Q70EK9 711 aa9.39□□□□□ -0.91
APOC1-201ENST00000586638 BPHLQ86WA6 291 aaPredicted RBP9.39□□□□□ -0.91
APOC1-201ENST00000586638 ZSCAN1Q8NBB4 408 aa9.39□□□□□ -0.91
APOC1-201ENST00000586638 PIK3C3Q8NEB9 887 aa9.39□□□□□ -0.91
APOC1-201ENST00000586638 ZNF555Q8NEP9 628 aa9.39□□□□□ -0.91
APOC1-201ENST00000586638 DAZLQ92904 295 aaKnown RBP9.39□□□□□ -0.91
APOC1-201ENST00000586638 MR1Q95460 341 aa9.39□□□□□ -0.91
APOC1-201ENST00000586638 EFHD2Q96C19 240 aaPredicted RBP9.39□□□□□ -0.91
APOC1-201ENST00000586638 ALPK1Q96QP1 1244 aa9.39□□□□□ -0.91
APOC1-201ENST00000586638 NIPSNAP1Q9BPW8 284 aa9.39□□□□□ -0.91
APOC1-201ENST00000586638 CRB3Q9BUF7 120 aa9.39□□□□□ -0.91
APOC1-201ENST00000586638 FNDC11Q9BVV2 318 aa9.39□□□□□ -0.91
APOC1-201ENST00000586638 STRADBQ9C0K7 418 aa9.39□□□□□ -0.91
APOC1-201ENST00000586638 NXF5Q9H1B4 397 aaKnown RBP9.39□□□□□ -0.91
APOC1-201ENST00000586638 PNPLA3Q9NST1 481 aa9.39□□□□□ -0.91
APOC1-201ENST00000586638 MAN2C1Q9NTJ4 1040 aa9.39□□□□□ -0.91
APOC1-201ENST00000586638 FAM118AQ9NWS6 357 aa9.39□□□□□ -0.91
APOC1-201ENST00000586638 KLHL28Q9NXS3 571 aa9.39□□□□□ -0.91
APOC1-201ENST00000586638 FLRT3Q9NZU0 649 aa9.39□□□□□ -0.91
APOC1-201ENST00000586638 AKAP7Q9P0M2 348 aaPredicted RBP9.39□□□□□ -0.91
APOC1-201ENST00000586638 COPS7AQ9UBW8 275 aa9.39□□□□□ -0.91
APOC1-201ENST00000586638 PISDQ9UG56 409 aa9.39□□□□□ -0.91
APOC1-201ENST00000586638 GPN3Q9UHW5 284 aaPredicted RBP9.39□□□□□ -0.91
APOC1-201ENST00000586638 C3orf18Q9UK00 162 aa9.39□□□□□ -0.91
APOC1-201ENST00000586638 SSUH2Q9Y2M2 353 aa9.39□□□□□ -0.91
APOC1-201ENST00000586638 PCDHGA10Q9Y5H3 936 aa9.39□□□□□ -0.91
APOC1-201ENST00000586638 SAGE2PA6NJ88 616 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 B4E171 279 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 NPIPB9F8W1W9 429 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 H0YAE9 185 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 FAAHO00519 579 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 AP3D1O14617 1153 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 BCKDKO14874 412 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 SEC24DO94855 1032 aaPredicted RBP9.38□□□□□ -0.91
APOC1-201ENST00000586638 CCNYL3P0C7X3 344 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 GKN3PP0CG01 181 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 SMIM18P0DKX4 95 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 PRG2P13727 222 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 PTNP21246 168 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 CBLP22681 906 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 HTR2AP28223 471 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 POLR2IP36954 125 aaKnown RBP9.38□□□□□ -0.91
APOC1-201ENST00000586638 TSPAN7P41732 249 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 GSSP48637 474 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 ZNF136P52737 540 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 EMP2P54851 167 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 TPD52P55327 224 aaPredicted RBP9.38□□□□□ -0.91
APOC1-201ENST00000586638 TAS2R41P59536 307 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 NDUFAF6Q330K2 333 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 C3orf38Q5JPI3 329 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 RNF220Q5VTB9 566 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 TMEM154Q6P9G4 183 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 PODNL1Q6PEZ8 512 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 PAPD4Q6PIY7 484 aaKnown RBP9.38□□□□□ -0.91
APOC1-201ENST00000586638 CCDC81Q6ZN84 652 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 AQP11Q8NBQ7 271 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 GALNT6Q8NCL4 622 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 DIO2Q92813 273 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 ADIPOR1Q96A54 375 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 C8orf44Q96CB5 159 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 FEVQ99581 238 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 MCHR1Q99705 422 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 CMKLR1Q99788 373 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 PSD2Q9BQI7 771 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 FUZQ9BT04 418 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 WWTR1Q9GZV5 400 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 SLC26A1Q9H2B4 701 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 FBXO8Q9NRD0 319 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 PAPOLBQ9NRJ5 636 aaKnown RBP9.38□□□□□ -0.91
APOC1-201ENST00000586638 ZNF223Q9UK11 482 aaPredicted RBP9.38□□□□□ -0.91
APOC1-201ENST00000586638 TMCC3Q9ULS5 477 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 ZNF232Q9UNY5 417 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 B3GALT1Q9Y5Z6 326 aa9.38□□□□□ -0.91
APOC1-201ENST00000586638 SDK2Q58EX2 2172 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 PTPRQQ9UMZ3 2332 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 C2orf92A0A1B0GVN3 265 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 A0A1W2PNU3 283 aaPredicted RBP9.37□□□□□ -0.91
APOC1-201ENST00000586638 SH3PXD2BA1X283 911 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 CDC14CA4D256 554 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 CDHR4A6H8M9 788 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 SYNDIG1LA6NDD5 238 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 ARRDC5A6NEK1 342 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 C9J4A7 227 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 PIP5K1CO60331 668 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 ANXA8P13928 327 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 POU2F1P14859 743 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 CDH2P19022 906 aaPredicted RBP9.37□□□□□ -0.91
APOC1-201ENST00000586638 EPHA2P29317 976 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 PPICP45877 212 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 CLK3P49761 638 aaKnown RBP9.37□□□□□ -0.91
APOC1-201ENST00000586638 NR0B1P51843 470 aaKnown RBP9.37□□□□□ -0.91
APOC1-201ENST00000586638 HMGA2P52926 109 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 UGT2B15P54855 530 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 BLMHQ13867 455 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms