RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 SEC14L3Q9UDX4 400 aa17.46■□□□□ 0.39
DDX39A-204ENST00000586558 NPIPA1Q9UND3 350 aa17.46■□□□□ 0.39
DDX39A-204ENST00000586558 SLC35A3Q9Y2D2 325 aa17.46■□□□□ 0.39
DDX39A-204ENST00000586558 PGM3O95394 542 aa17.45■□□□□ 0.38
DDX39A-204ENST00000586558 IGHG3P01860 377 aa17.45■□□□□ 0.38
DDX39A-204ENST00000586558 HPNP05981 417 aa17.45■□□□□ 0.38
DDX39A-204ENST00000586558 UBL4AP11441 157 aa17.45■□□□□ 0.38
DDX39A-204ENST00000586558 ETS2P15036 469 aa17.45■□□□□ 0.38
DDX39A-204ENST00000586558 SUMO3P55854 103 aaPredicted RBP17.45■□□□□ 0.38
DDX39A-204ENST00000586558 FGFBP1Q14512 234 aa17.45■□□□□ 0.38
DDX39A-204ENST00000586558 MAPK14Q16539 360 aa17.45■□□□□ 0.38
DDX39A-204ENST00000586558 ZSWIM7Q19AV6 140 aa17.45■□□□□ 0.38
DDX39A-204ENST00000586558 OR5M10Q6IEU7 315 aa17.45■□□□□ 0.38
DDX39A-204ENST00000586558 TRPM8Q7Z2W7 1104 aa17.45■□□□□ 0.38
DDX39A-204ENST00000586558 CALHM3Q86XJ0 350 aa17.45■□□□□ 0.38
DDX39A-204ENST00000586558 KRT73Q86Y46 540 aa17.45■□□□□ 0.38
DDX39A-204ENST00000586558 PTOV1Q86YD1 416 aa17.45■□□□□ 0.38
DDX39A-204ENST00000586558 GHDCQ8N2G8 530 aa17.45■□□□□ 0.38
DDX39A-204ENST00000586558 GATSQ8NAP1 163 aa17.45■□□□□ 0.38
DDX39A-204ENST00000586558 HIPK4Q8NE63 616 aa17.45■□□□□ 0.38
DDX39A-204ENST00000586558 OR2M3Q8NG83 312 aa17.45■□□□□ 0.38
DDX39A-204ENST00000586558 OR10A6Q8NH74 314 aa17.45■□□□□ 0.38
DDX39A-204ENST00000586558 NFKBIDQ8NI38 313 aa17.45■□□□□ 0.38
DDX39A-204ENST00000586558 DSN1Q9H410 356 aa17.45■□□□□ 0.38
DDX39A-204ENST00000586558 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.45■□□□□ 0.38
DDX39A-204ENST00000586558 NDE1Q9NXR1 346 aa17.45■□□□□ 0.38
DDX39A-204ENST00000586558 ANGPT4Q9Y264 503 aa17.45■□□□□ 0.38
DDX39A-204ENST00000586558 MRPS18CQ9Y3D5 142 aaKnown RBP17.45■□□□□ 0.38
DDX39A-204ENST00000586558 L3MBTL1Q9Y468 752 aa17.45■□□□□ 0.38
DDX39A-204ENST00000586558 HRH3Q9Y5N1 445 aa17.45■□□□□ 0.38
DDX39A-204ENST00000586558 CENPVL1A0A0U1RR11 272 aa17.44■□□□□ 0.38
DDX39A-204ENST00000586558 GTPBP1O00178 669 aaKnown RBP17.44■□□□□ 0.38
DDX39A-204ENST00000586558 HCRTR2O43614 444 aa17.44■□□□□ 0.38
DDX39A-204ENST00000586558 SUSD5O60279 629 aa17.44■□□□□ 0.38
DDX39A-204ENST00000586558 EIF4E2O60573 245 aaKnown RBP17.44■□□□□ 0.38
DDX39A-204ENST00000586558 HCN1O60741 890 aa17.44■□□□□ 0.38
DDX39A-204ENST00000586558 CSTAP01040 98 aa17.44■□□□□ 0.38
DDX39A-204ENST00000586558 THBS1P07996 1170 aa17.44■□□□□ 0.38
DDX39A-204ENST00000586558 ESRRAP11474 423 aaPredicted RBP17.44■□□□□ 0.38
DDX39A-204ENST00000586558 SRD5A2P31213 254 aa17.44■□□□□ 0.38
DDX39A-204ENST00000586558 PCGF2P35227 344 aa17.44■□□□□ 0.38
DDX39A-204ENST00000586558 GZMMP51124 257 aa17.44■□□□□ 0.38
DDX39A-204ENST00000586558 DSCR4P56555 118 aaPredicted RBP17.44■□□□□ 0.38
DDX39A-204ENST00000586558 FOXK1P85037 733 aa17.44■□□□□ 0.38
DDX39A-204ENST00000586558 RPS26P11Q5JNZ5 115 aaPredicted RBP17.44■□□□□ 0.38
DDX39A-204ENST00000586558 ERICH5Q6P6B1 374 aa17.44■□□□□ 0.38
DDX39A-204ENST00000586558 ATCAYQ86WG3 371 aa17.44■□□□□ 0.38
DDX39A-204ENST00000586558 ZZZ3Q8IYH5 903 aa17.44■□□□□ 0.38
DDX39A-204ENST00000586558 TOR1AIP2Q8NFQ8 470 aa17.44■□□□□ 0.38
DDX39A-204ENST00000586558 WDR60Q8WVS4 1066 aa17.44■□□□□ 0.38
DDX39A-204ENST00000586558 ZG16BQ96DA0 208 aa17.44■□□□□ 0.38
DDX39A-204ENST00000586558 REXO5Q96IC2 774 aaKnown RBP17.44■□□□□ 0.38
DDX39A-204ENST00000586558 OR2B2Q9GZK3 357 aa17.44■□□□□ 0.38
DDX39A-204ENST00000586558 DEFB127Q9H1M4 99 aa17.44■□□□□ 0.38
DDX39A-204ENST00000586558 FBXL2Q9UKC9 423 aa17.44■□□□□ 0.38
DDX39A-204ENST00000586558 IFT52Q9Y366 437 aa17.44■□□□□ 0.38
DDX39A-204ENST00000586558 C17orf51A8MQB3 221 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 ZNF264O43296 627 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 CELA3AP09093 270 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 NID1P14543 1247 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 IL7RP16871 459 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 DPP4P27487 766 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 CPA2P48052 419 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 SLC7A2P52569 658 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 PSME3P61289 254 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 KCNJ10P78508 379 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 ZNF117Q03924 483 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 LARS2Q15031 903 aaKnown RBP17.43■□□□□ 0.38
DDX39A-204ENST00000586558 TOMM20Q15388 145 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 VMACQ2NL98 169 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 LIN52Q52LA3 116 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 INTS11Q5TA45 600 aaKnown RBP17.43■□□□□ 0.38
DDX39A-204ENST00000586558 ARHGAP11AQ6P4F7 1023 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 GFRALQ6UXV0 394 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 SLC15A3Q8IY34 581 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 FAM71CQ8NEG0 241 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 OR52P1PQ8NH57 321 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 B4GALNT2Q8NHY0 566 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 C1GALT1C1Q96EU7 318 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 NSL1Q96IY1 281 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 ZNF607Q96SK3 696 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 SPATA5L1Q9BVQ7 753 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 QRSL1Q9H0R6 528 aaKnown RBP17.43■□□□□ 0.38
DDX39A-204ENST00000586558 ARMC7Q9H6L4 198 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 SPAG4Q9NPE6 437 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 MED11Q9P086 117 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 DKKL1Q9UK85 242 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 ZNF232Q9UNY5 417 aa17.43■□□□□ 0.38
DDX39A-204ENST00000586558 A0A087WZY1 265 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 TRGV5A0A0B4J1U4 118 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 A0A1B0GVC2 190 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 FAM220BPB1ANY3 271 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 B4DXG7 233 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 CDC40O60508 579 aaKnown RBP eCLIP17.42■□□□□ 0.38
DDX39A-204ENST00000586558 DNAJA2O60884 412 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 TRAPPC6AO75865 159 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 PDE9AO76083 593 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 CBX6O95503 412 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 CALB2P22676 271 aa17.42■□□□□ 0.38
DDX39A-204ENST00000586558 GCKP35557 465 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms