RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 RTN4RQ9BZR6 473 aa15.16■□□□□ 0.02
CSNK1D-225ENST00000584913 NMUR2Q9GZQ4 415 aa15.16■□□□□ 0.02
CSNK1D-225ENST00000584913 MCCC2Q9HCC0 563 aa15.16■□□□□ 0.02
CSNK1D-225ENST00000584913 POLE3Q9NRF9 147 aa15.16■□□□□ 0.02
CSNK1D-225ENST00000584913 PNPOQ9NVS9 261 aa15.16■□□□□ 0.02
CSNK1D-225ENST00000584913 AIG1Q9NVV5 245 aa15.16■□□□□ 0.02
CSNK1D-225ENST00000584913 BTNL2Q9UIR0 455 aa15.16■□□□□ 0.02
CSNK1D-225ENST00000584913 ZNF175Q9Y473 711 aa15.16■□□□□ 0.02
CSNK1D-225ENST00000584913 FREM3P0C091 2139 aa15.16■□□□□ 0.02
CSNK1D-225ENST00000584913 NOTCH2Q04721 2471 aa15.16■□□□□ 0.02
CSNK1D-225ENST00000584913 CLCA1A8K7I4 914 aa15.15■□□□□ 0.02
CSNK1D-225ENST00000584913 NPIPB9F8W1W9 429 aa15.15■□□□□ 0.02
CSNK1D-225ENST00000584913 H3BNH8 94 aa15.15■□□□□ 0.02
CSNK1D-225ENST00000584913 TGDSO95455 350 aa15.15■□□□□ 0.02
CSNK1D-225ENST00000584913 IDO1P14902 403 aa15.15■□□□□ 0.02
CSNK1D-225ENST00000584913 POU3F2P20265 443 aaPredicted RBP15.15■□□□□ 0.02
CSNK1D-225ENST00000584913 UQCRC2P22695 453 aa15.15■□□□□ 0.02
CSNK1D-225ENST00000584913 FGFBP1Q14512 234 aa15.15■□□□□ 0.02
CSNK1D-225ENST00000584913 PGS1Q32NB8 556 aa15.15■□□□□ 0.02
CSNK1D-225ENST00000584913 OR4F3Q6IEY1 312 aa15.15■□□□□ 0.02
CSNK1D-225ENST00000584913 FIGNL1Q6PIW4 674 aa15.15■□□□□ 0.02
CSNK1D-225ENST00000584913 GTPBP8Q8N3Z3 284 aaPredicted RBP15.15■□□□□ 0.02
CSNK1D-225ENST00000584913 METTL25Q8N6Q8 603 aa15.15■□□□□ 0.02
CSNK1D-225ENST00000584913 TOR1AIP2Q8NFQ8 470 aa15.15■□□□□ 0.02
CSNK1D-225ENST00000584913 CDS1Q92903 461 aa15.15■□□□□ 0.02
CSNK1D-225ENST00000584913 CCDC115Q96NT0 180 aa15.15■□□□□ 0.02
CSNK1D-225ENST00000584913 FAM107BQ9H098 131 aa15.15■□□□□ 0.02
CSNK1D-225ENST00000584913 PIGMQ9H3S5 423 aa15.15■□□□□ 0.02
CSNK1D-225ENST00000584913 MED11Q9P086 117 aa15.15■□□□□ 0.02
CSNK1D-225ENST00000584913 RNF103-CHMP3A0A140T963 221 aa15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 OR2M5A3KFT3 312 aa15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 ALDOCP09972 364 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 TMIGD3P0DMS9 266 aaPredicted RBP15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 FCGR2AP12318 317 aa15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 EFNA1P20827 205 aaPredicted RBP15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 ELK4P28324 431 aa15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 ADH6P28332 368 aa15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 SOAT1P35610 550 aa15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 EIF1P41567 113 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 ATP12AP54707 1039 aa15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 RPS3AP61247 264 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 STX5Q13190 355 aa15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 GSTA3Q16772 222 aa15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 KLHL26Q53HC5 615 aa15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 MSANTD1Q6ZTZ1 278 aa15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 CHMP1BQ7LBR1 199 aa15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 PIGWQ7Z7B1 504 aa15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 KIF18BQ86Y91 864 aa15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 TRIML2Q8N7C3 387 aa15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 C9orf106Q8NAJ2 232 aa15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 FBXO30Q8TB52 745 aa15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 PPP1R36Q96LQ0 422 aa15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 LURAP1Q96LR2 239 aa15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 OR7D2Q96RA2 312 aa15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 SLCO1B3Q9NPD5 702 aa15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 EXD2Q9NVH0 621 aa15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 RPH3AQ9Y2J0 694 aaPredicted RBP15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 L3MBTL1Q9Y468 752 aa15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 APCP25054 2843 aa15.14■□□□□ 0.01
CSNK1D-225ENST00000584913 SNX3O60493 162 aa15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 TROVE2P10155 538 aaKnown RBP eCLIP15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 BMP5P22003 454 aa15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 FBN2P35556 2912 aa15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 MRPL19P49406 292 aaKnown RBP15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 ZNF41P51814 821 aaPredicted RBP15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 DGKQP52824 942 aa15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 IRX1P78414 480 aaPredicted RBP15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 PLPPR5Q32ZL2 321 aa15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 ARHGAP11BQ3KRB8 267 aa15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 FLYWCH1Q4VC44 716 aa15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 PDCD4Q53EL6 469 aaKnown RBP15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 SPANXN4Q5MJ08 99 aa15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 SAXO2Q658L1 398 aa15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 HEPHL1Q6MZM0 1159 aa15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 C6orf120Q7Z4R8 191 aa15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 SPATA21Q7Z572 469 aa15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 ZAR1Q86SH2 424 aa15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 WDR75Q8IWA0 830 aaKnown RBP15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 CLECL1Q8IZS7 167 aa15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 OR4A15Q8NGL6 344 aa15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 NEURL3Q96EH8 262 aa15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 SLC35G5Q96KT7 338 aa15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 SDF2Q99470 211 aa15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 SIKE1Q9BRV8 207 aa15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 ZNF350Q9GZX5 532 aa15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 GPR45Q9Y5Y3 372 aa15.13■□□□□ 0.01
CSNK1D-225ENST00000584913 ENO4A6NNW6 628 aa15.12■□□□□ 0.01
CSNK1D-225ENST00000584913 KDM4EB2RXH2 506 aaPredicted RBP15.12■□□□□ 0.01
CSNK1D-225ENST00000584913 ETV2O00321 342 aaPredicted RBP15.12■□□□□ 0.01
CSNK1D-225ENST00000584913 EIF4E2O60573 245 aaKnown RBP15.12■□□□□ 0.01
CSNK1D-225ENST00000584913 STX11O75558 287 aa15.12■□□□□ 0.01
CSNK1D-225ENST00000584913 IL6P05231 212 aa15.12■□□□□ 0.01
CSNK1D-225ENST00000584913 MATN1P21941 496 aa15.12■□□□□ 0.01
CSNK1D-225ENST00000584913 PSMA4P25789 261 aaKnown RBP15.12■□□□□ 0.01
CSNK1D-225ENST00000584913 EPHA3P29320 983 aa15.12■□□□□ 0.01
CSNK1D-225ENST00000584913 S100A3P33764 101 aa15.12■□□□□ 0.01
CSNK1D-225ENST00000584913 STARP49675 285 aa15.12■□□□□ 0.01
CSNK1D-225ENST00000584913 ANXA11P50995 505 aaKnown RBP15.12■□□□□ 0.01
CSNK1D-225ENST00000584913 P2RX1P51575 399 aa15.12■□□□□ 0.01
CSNK1D-225ENST00000584913 RAC1P63000 192 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms