RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 OR2T12Q8NG77 320 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 DQX1Q8TE96 717 aaKnown RBP3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 HEXDCQ8WVB3 486 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 KCTD4Q8WVF5 259 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 SEPT8Q92599 483 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 C18orf25Q96B23 403 aaPredicted RBP3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 EFHD2Q96C19 240 aaPredicted RBP3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 TMA16Q96EY4 203 aaKnown RBP3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 SLC47A1Q96FL8 570 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 EGLN2Q96KS0 407 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 RDH12Q96NR8 316 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 IL12RB2Q99665 862 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 CIB1Q99828 191 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 BCL7BQ9BQE9 202 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 MLPHQ9BV36 600 aaPredicted RBP3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 DUSP16Q9BY84 665 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 TRPV6Q9H1D0 765 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 UPF3AQ9H1J1 476 aaKnown RBP3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 CAB39LQ9H9S4 337 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 PELI2Q9HAT8 420 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 AGPAT4Q9NRZ5 378 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 TREX1Q9NSU2 369 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 TBC1D13Q9NVG8 400 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 SMOXQ9NWM0 555 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 GID8Q9NWU2 228 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 ERAP1Q9NZ08 941 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 TUBGCP4Q9UGJ1 667 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 PSME2Q9UL46 239 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 STAP1Q9ULZ2 295 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 PLAGL1Q9UM63 463 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 UBQLN1Q9UMX0 589 aaKnown RBP3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 ERGIC3Q9Y282 383 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 CMAHPQ9Y471 501 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 MFHAS1Q9Y4C4 1052 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 HES2Q9Y543 173 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 FADS3Q9Y5Q0 445 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 TANC1Q9C0D5 1861 aa3.53□□□□□ -1.84
SMCHD1-208ENST00000583344 COL4A5P29400 1685 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 DOCK1Q14185 1865 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 TEX13DA0A0J9YY54 714 aaPredicted RBP3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 EDDM13A0A1B0GTR0 161 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 DHRS12A0PJE2 317 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 ASB14A6NK59 587 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 KCNK1O00180 336 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 KPNA4O00629 521 aaPredicted RBP3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 MAGEB3O15480 346 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 CLOCKO15516 846 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 ATP6V1G1O75348 118 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 SRP72O76094 671 aaKnown RBP3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 SUPT7LO94864 414 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 BCL10O95999 233 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 FAM157CP0CG43 387 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 MBL2P11226 248 aaPredicted RBP3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 GFAPP14136 432 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 MMP9P14780 707 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 GJA1P17302 382 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 HOXB8P17481 243 aaPredicted RBP3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 LMO2P25791 158 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 HTR1EP28566 365 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 AXLP30530 894 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 SLC6A12P48065 614 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 CD151P48509 253 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 LBX1P52954 281 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 CTSCP53634 463 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 GEMP55040 296 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 TAS2R39P59534 338 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 EMX2Q04743 252 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 BTG3Q14201 252 aaPredicted RBP3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 SNAPC1Q16533 368 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 SNAI3Q3KNW1 292 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 UNC50Q53HI1 259 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 CYBRD1Q53TN4 286 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 ZRANB3Q5FWF4 1079 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 XKR6Q5GH73 641 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 ZNF678Q5SXM1 525 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 SYPL2Q5VXT5 272 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 NEPROQ6NW34 567 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 ZNF613Q6PF04 617 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 CYHR1Q6ZMK1 362 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 CFAP77Q6ZQR2 320 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 Q6ZSR9 355 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 NCCRP1Q6ZVX7 275 aaPredicted RBP3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 ARMCX2Q7L311 632 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 SPATA19Q7Z5L4 167 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 PIGZQ86VD9 579 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 FAM131BQ86XD5 332 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 MFSD6LQ8IWD5 586 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 RIMKLAQ8IXN7 391 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 PEX5LQ8IYB4 626 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 RNF168Q8IYW5 571 aaPredicted RBP3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 SFRP1Q8N474 314 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 CBR4Q8N4T8 237 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 CCNYL1Q8N7R7 359 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 ATAD1Q8NBU5 361 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 OR52E4Q8NGH9 312 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 OR13F1Q8NGS4 319 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 RHEBL1Q8TAI7 183 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 PEX13Q92968 403 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 POP5Q969H6 163 aaKnown RBP3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 LRRC58Q96CX6 371 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms