RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	CCT7	Q99832	543 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	GATA5	Q9BWX5	397 aa	Predicted RBP	10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	GIN1	Q9NXP7	522 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	STOML1	Q9UBI4	398 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114		A0A087WZY1	265 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	TTC36	A6NLP5	189 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	NPIPB8	E9PQR5	432 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114		H3BQF6	201 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	SCD	O00767	359 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	KLF4	O43474	513 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	SS18L1	O75177	396 aa	Predicted RBP	10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	CHRNG	P07510	517 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	ALOX5	P09917	674 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	PRPH2	P23942	346 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	SHC1	P29353	583 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	CRHR1	P34998	444 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	PTH2R	P49190	550 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	PCYT1A	P49585	367 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	PRIM2	P49643	509 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	NAA20	P61599	178 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	FOXF1	Q12946	379 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	LASP1	Q14847	261 aa	Known RBP	10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	PCLAF	Q15004	111 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	TSC22D1	Q15714	1073 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	BEX5	Q5H9J7	111 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	ZNF704	Q6ZNC4	412 aa	Predicted RBP	10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	C20orf204	Q6ZNR8	217 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	PLEKHM3	Q6ZWE6	761 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	ATP6V1C2	Q8NEY4	427 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	OR7A2P	Q8NGA2	310 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	OR2V1	Q8NHB1	315 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	B4GALNT2	Q8NHY0	566 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	POC1B	Q8TC44	478 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	AGR3	Q8TD06	166 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	NUDT8	Q8WV74	236 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	HOXB13	Q92826	284 aa	Predicted RBP	10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	CDS1	Q92903	461 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	PLPPR2	Q96GM1	343 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	ACTR6	Q9GZN1	396 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	PLSCR4	Q9NRQ2	329 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	ZCCHC3	Q9NUD5	404 aa	Known RBP	10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	SNX8	Q9Y5X2	465 aa		10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	RAI1	Q7Z5J4	1906 aa	Predicted RBP	10.4	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	FN1	P02751	2386 aa	Known RBP	10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	FAM171A2	A8MVW0	826 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	LSM1	O15116	133 aa	Known RBP	10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	OIP5	O43482	229 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	NUDT14	O95848	222 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	CHEK2	O96017	543 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	IFI6	P09912	130 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	NEFH	P12036	1026 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	BCKDHA	P12694	445 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	NID1	P14543	1247 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ME2	P23368	584 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	PSMA4	P25789	261 aa	Known RBP	10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	AGTR1	P30556	359 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	FRK	P42685	505 aa	Predicted RBP	10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	NR1H2	P55055	460 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	RAC1	P63000	192 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	POU6F2	P78424	691 aa	Predicted RBP	10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	OCRL	Q01968	901 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	PDE7A	Q13946	482 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	NDUFAF6	Q330K2	333 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	CPTP	Q5TA50	214 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	KANK2	Q63ZY3	851 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ESPNL	Q6ZVH7	1005 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	LILRA2	Q8N149	483 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ZNF619	Q8N2I2	560 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	OR6Y1	Q8NGX8	325 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	FAM110B	Q8TC76	370 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	PHOSPHO1	Q8TCT1	267 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ABHD3	Q8WU67	409 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	TWIST2	Q8WVJ9	160 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	OSTF1	Q92882	214 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	CAVIN3	Q969G5	261 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ZBTB8A	Q96BR9	441 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	FAM120B	Q96EK7	910 aa	Known RBP	10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	METTL2A	Q96IZ6	378 aa	Known RBP	10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	FCRL1	Q96LA6	429 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	BDH2	Q9BUT1	245 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	MECR	Q9BV79	373 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	SRXN1	Q9BYN0	137 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	IQCG	Q9H095	443 aa	Known RBP	10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	UBQLN4	Q9NRR5	601 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	SIRT3	Q9NTG7	399 aa	Predicted RBP	10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ACSS1	Q9NUB1	689 aa	Predicted RBP	10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	NTM	Q9P121	344 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	DNAJC15	Q9Y5T4	150 aa		10.39	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	PRR14L	Q5THK1	2151 aa		10.38	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ROS1	P08922	2347 aa		10.38	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	TLDC2	A0PJX2	215 aa		10.38	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	PIP5K1B	O14986	540 aa		10.38	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ADAMDEC1	O15204	470 aa		10.38	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	TBX19	O60806	448 aa		10.38	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	TRIM13	O60858	407 aa		10.38	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	CNOT4	O95628	575 aa	Known RBP	10.38	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	HMGN2	P05204	90 aa	Known RBP	10.38	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	NGFR	P08138	427 aa		10.38	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	LAMP1	P11279	417 aa		10.38	□□□□□ -0.75
CDK5RAP3-223	ENST00000582114	ALDH3A1	P30838	453 aa		10.38	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms