RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 C16orf52Q8NHV5 167 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 CNIH3Q8TBE1 160 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 TEX47Q8TBZ9 253 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.6□□□□□ -1.03
SS18-220ENST00000582092 APOBEC4Q8WW27 367 aaKnown RBP8.6□□□□□ -1.03
SS18-220ENST00000582092 ZG16BQ96DA0 208 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 SENP5Q96HI0 755 aaPredicted RBP8.6□□□□□ -1.03
SS18-220ENST00000582092 PLEKHA8Q96JA3 519 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 HS6ST2Q96MM7 605 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 GAL3ST4Q96RP7 486 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 NIPSNAP1Q9BPW8 284 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 DGCR6LQ9BY27 220 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 TRIM2Q9C040 744 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 YIPF3Q9GZM5 350 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 RLIMQ9NVW2 624 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 ACAD8Q9UKU7 415 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 A4GNTQ9UNA3 340 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 USP24Q9UPU5 2620 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 A0A087WV48 116 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 NPIPA5A0A0B4J1W7 369 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 C2orf92A0A1B0GVN3 265 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 A0A1W2PQM1 296 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 OR2W5A6NFC9 320 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 EFCAB7A8K855 629 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 NPIPA7E9PJI5 369 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 SLC1A7O00341 560 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 SCDO00767 359 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 FRS3O43559 492 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 RGS10O43665 173 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 FMO6PO60774 539 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 MRPS14O60783 128 aaKnown RBP8.59□□□□□ -1.03
SS18-220ENST00000582092 REM1O75628 298 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 TNFSF15O95150 251 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 TFAP2AP05549 437 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 LINGO3P0C6S8 592 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 NPIPA8P0DM63 369 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 S1PR1P21453 382 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 EIF2S3P41091 472 aaKnown RBP8.59□□□□□ -1.03
SS18-220ENST00000582092 PPICP45877 212 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 LIMS1P48059 325 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 SMSP52788 366 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 ATP12AP54707 1039 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 EEF1A1P68104 462 aaKnown RBP8.59□□□□□ -1.03
SS18-220ENST00000582092 IL11RAQ14626 422 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 PTGES3Q15185 160 aaKnown RBP8.59□□□□□ -1.03
SS18-220ENST00000582092 ZBED5Q49AG3 693 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 NKAIN1Q4KMZ8 207 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 VWA2Q5GFL6 755 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 PRAMEF17Q5VTA0 474 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 FAAH2Q6GMR7 532 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 PGBD2Q6P3X8 592 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 KLHL17Q6TDP4 642 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 ZNF574Q6ZN55 896 aaPredicted RBP8.59□□□□□ -1.03
SS18-220ENST00000582092 MED25Q71SY5 747 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 SLITRK4Q8IW52 837 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 CMIPQ8IY22 773 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 CYP4Z2PQ8N1L4 340 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 STX19Q8N4C7 294 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 MORN4Q8NDC4 146 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 OR4D11Q8NGI4 311 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 ADAMTS16Q8TE57 1224 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 KCNE4Q8WWG9 221 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 ACOT11Q8WXI4 607 aaPredicted RBP8.59□□□□□ -1.03
SS18-220ENST00000582092 DHRS1Q96LJ7 313 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 SLC38A2Q96QD8 506 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 PITX2Q99697 317 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 TUBA1CQ9BQE3 449 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 DPH1Q9BZG8 443 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 CXorf56Q9H5V9 222 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 ENAMQ9NRM1 1142 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 LANCL2Q9NS86 450 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 C19orf25Q9UFG5 118 aaPredicted RBP8.59□□□□□ -1.03
SS18-220ENST00000582092 TESQ9UGI8 421 aaKnown RBP8.59□□□□□ -1.03
SS18-220ENST00000582092 WARS2Q9UGM6 360 aaKnown RBP8.59□□□□□ -1.03
SS18-220ENST00000582092 SLC7A7Q9UM01 511 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 LHX6Q9UPM6 363 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 RNF6Q9Y252 685 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 TMEM5Q9Y2B1 443 aa8.59□□□□□ -1.03
SS18-220ENST00000582092 TMEM184BQ9Y519 407 aaPredicted RBP8.59□□□□□ -1.03
SS18-220ENST00000582092 COL27A1Q8IZC6 1860 aaPredicted RBP8.59□□□□□ -1.03
SS18-220ENST00000582092 ANKRD11Q6UB99 2663 aaPredicted RBP8.58□□□□□ -1.04
SS18-220ENST00000582092 FAM208BQ5VWN6 2430 aa8.58□□□□□ -1.04
SS18-220ENST00000582092 OR6C76A6NM76 312 aa8.58□□□□□ -1.04
SS18-220ENST00000582092 C9J4A7 227 aa8.58□□□□□ -1.04
SS18-220ENST00000582092 PEX12O00623 359 aa8.58□□□□□ -1.04
SS18-220ENST00000582092 CSTAP01040 98 aa8.58□□□□□ -1.04
SS18-220ENST00000582092 ZGLP1P0C6A0 271 aa8.58□□□□□ -1.04
SS18-220ENST00000582092 GKN3PP0CG01 181 aa8.58□□□□□ -1.04
SS18-220ENST00000582092 ENDOUP21128 410 aaKnown RBP8.58□□□□□ -1.04
SS18-220ENST00000582092 DRD5P21918 477 aa8.58□□□□□ -1.04
SS18-220ENST00000582092 CHMP24386 653 aa8.58□□□□□ -1.04
SS18-220ENST00000582092 STAT5AP42229 794 aa8.58□□□□□ -1.04
SS18-220ENST00000582092 EMP2P54851 167 aa8.58□□□□□ -1.04
SS18-220ENST00000582092 NRG3P56975 720 aa8.58□□□□□ -1.04
SS18-220ENST00000582092 PSPHP78330 225 aa8.58□□□□□ -1.04
SS18-220ENST00000582092 HOXC5Q00444 222 aa8.58□□□□□ -1.04
SS18-220ENST00000582092 PSG6Q00889 435 aa8.58□□□□□ -1.04
SS18-220ENST00000582092 TUBA3CQ13748 450 aa8.58□□□□□ -1.04
SS18-220ENST00000582092 SEC23BQ15437 767 aa8.58□□□□□ -1.04
SS18-220ENST00000582092 OR1Q1Q15612 314 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms