RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 RPGRIP1LQ68CZ1 1315 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 MYO10Q9HD67 2058 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 SYCE3A1L190 88 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 E9PMD0 336 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 K7N7A8 449 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 SGK494L7N484 410 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 OLFM2O95897 454 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 XRCC1P18887 633 aaPredicted RBP1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 AQP1P29972 269 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 HPDP32754 393 aaPredicted RBP1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 CTRLP40313 264 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 BTDP43251 543 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 KIR2DS2P43631 304 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 ST3GAL3Q11203 375 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 CDKN3Q16667 212 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 DNM1P46Q6ZS02 220 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 TMEM26Q6ZUK4 368 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 C1orf186Q6ZWK4 172 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 CYS1Q717R9 158 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 TAF8Q7Z7C8 310 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 SYVN1Q86TM6 617 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 LCA5Q86VQ0 697 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 ZNF786Q8N393 782 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 TMEM252Q8N6L7 170 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 SUMF2Q8NBJ7 301 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 OR9A1PQ8NGU1 263 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 MYDGFQ969H8 173 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 CCDC43Q96MW1 224 aaKnown RBP1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 MBOAT4Q96T53 435 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 WRAP53Q9BUR4 548 aaKnown RBP1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 CHIAQ9BZP6 476 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 COMMD4Q9H0A8 199 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 APMAPQ9HDC9 416 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 P2RX2Q9UBL9 471 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 KCNN3Q9UGI6 736 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 RIMS3Q9UJD0 308 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 SMC3Q9UQE7 1217 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 WDR45Q9Y484 360 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 WSB1Q9Y6I7 421 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 CDH10Q9Y6N8 788 aa1.94□□□□□ -2.1
SMCHD1-206ENST00000581631 TRBV6-6A0A0A6YYG2 114 aa1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 KERAO60938 352 aa1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 NPIPB7O75200 414 aa1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 ANXA4P09525 319 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 RALAP11233 206 aa1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 AHCYP23526 432 aa1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 HTR1FP30939 366 aa1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 APOC4P55056 127 aa1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 SNX1Q13596 522 aa1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 CFAP221Q4G0U5 840 aa1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 C1QTNF12Q5T7M4 302 aa1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 ZNF691Q5VV52 312 aa1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 SCYL2Q6P3W7 929 aa1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 FAM220AQ7Z4H9 259 aa1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 VPS36Q86VN1 386 aa1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 ZSCAN4Q8NAM6 433 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 NEIL3Q8TAT5 605 aa1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 MARCH1Q8TCQ1 289 aa1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 ZNF721Q8TF20 911 aa1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 UPRTQ96BW1 309 aa1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 POLR3FQ9H1D9 316 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 SLC25A51Q9H1U9 297 aa1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 TMEM231Q9H6L2 316 aa1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 RPAP3Q9H6T3 665 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 SYTL2Q9HCH5 934 aa1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 MMP26Q9NRE1 261 aa1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 XPO7Q9UIA9 1087 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 PLA2G4CQ9UP65 541 aa1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 EIF3LQ9Y262 564 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-206ENST00000581631 THSD7BQ9C0I4 1608 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 IGKV2D-24A0A075B6R9 120 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 LOC100131303A0A0U1RQF7 123 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 ARHGAP42A6NI28 874 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 ANKRD63C9JTQ0 380 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 SNAI2O43623 268 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 EFNA2O43921 213 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 AKR7A3O95154 331 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 SLC4A1P02730 911 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 IGHV4-34P06331 123 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 ANXA3P12429 323 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 BCKDHAP12694 445 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 H2AFXP16104 143 aaPredicted RBP1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 CCNCP24863 283 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 NUDT1P36639 197 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 FUT7Q11130 342 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 CBX3Q13185 183 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 UNC119Q13432 240 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 GPNMBQ14956 572 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 DNAJC21Q5F1R6 531 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 OR6B2Q6IFH4 312 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 LPCAT2Q7L5N7 544 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 LRRC70Q7Z2Q7 622 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 ZNF740Q8NDX6 193 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 OR52I1Q8NGK6 324 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 IL1F10Q8WWZ1 152 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 RNF126Q9BV68 326 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 ACAT2Q9BWD1 397 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 CNOT2Q9NZN8 540 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 FETUBQ9UGM5 382 aa1.92□□□□□ -2.1
SMCHD1-206ENST00000581631 SCML2Q9UQR0 700 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms