RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 PLIN3O60664 434 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 GLRA3O75311 464 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 KCNK2O95069 426 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 SYNGR4O95473 234 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 NID1P14543 1247 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 CRHR1P34998 444 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 GPC1P35052 558 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 CCT5P48643 541 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 PRKAG1P54619 331 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 MANFP55145 182 aaKnown RBP9.47□□□□□ -0.89
RFFL-209ENST00000581265 SLC18A2Q05940 514 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 HSPB3Q12988 150 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 PDE7AQ13946 482 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 PLPPR5Q32ZL2 321 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 CCDC153Q494R4 210 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 CFAP157Q5JU67 520 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 EXOSC6Q5RKV6 272 aaKnown RBP9.47□□□□□ -0.89
RFFL-209ENST00000581265 MFSD12Q6NUT3 480 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 RNF165Q6ZSG1 346 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 GALNT10Q86SR1 603 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 STK32CQ86UX6 486 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 TRABD2AQ86V40 505 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 MISPQ8IVT2 679 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 NUP43Q8NFH3 380 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 OR2V1Q8NHB1 315 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 ZFP28Q8NHY6 868 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 TMEM171Q8WVE6 324 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 OSTF1Q92882 214 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 CIDECQ96AQ7 238 aaPredicted RBP9.47□□□□□ -0.89
RFFL-209ENST00000581265 ZBED6CLQ96FA7 236 aaPredicted RBP9.47□□□□□ -0.89
RFFL-209ENST00000581265 PLPPR2Q96GM1 343 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 FCRL1Q96LA6 429 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 NPAS1Q99742 590 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 CCT7Q99832 543 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 HDHD5Q9BXW7 423 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 CXorf56Q9H5V9 222 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 LRTM1Q9HBL6 345 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 ACSS1Q9NUB1 689 aaPredicted RBP9.47□□□□□ -0.89
RFFL-209ENST00000581265 MED17Q9NVC6 651 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 C1orf109Q9NX04 203 aa9.47□□□□□ -0.89
RFFL-209ENST00000581265 FBN1P35555 2871 aaKnown RBP9.47□□□□□ -0.89
RFFL-209ENST00000581265 SONP18583 2426 aaKnown RBP9.46□□□□□ -0.89
RFFL-209ENST00000581265 UQCRHLA0A096LP55 91 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 A0A1W2PQD3 144 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 TNFSF11O14788 317 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 HS3ST1O14792 307 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 RGS14O43566 566 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 HSPA4LO95757 839 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 PLAUP00749 431 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 OPN1LWP04000 364 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 LINGO3P0C6S8 592 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 FAM153BP0C7A2 387 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 PABPC4LP0CB38 370 aaKnown RBP9.46□□□□□ -0.9
RFFL-209ENST00000581265 ACP2P11117 423 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 CPA3P15088 417 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 HPGDP15428 266 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 SDC1P18827 310 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 ME2P23368 584 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 EIF1P41567 113 aaKnown RBP9.46□□□□□ -0.9
RFFL-209ENST00000581265 SERPINB4P48594 390 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 ZNF41P51814 821 aaPredicted RBP9.46□□□□□ -0.9
RFFL-209ENST00000581265 CARD18P57730 90 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 CAPRIN1Q14444 709 aaKnown RBP9.46□□□□□ -0.9
RFFL-209ENST00000581265 DUSP5Q16690 384 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 FAM153CQ494X1 144 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 RFTN2Q52LD8 501 aaPredicted RBP9.46□□□□□ -0.9
RFFL-209ENST00000581265 ZNF385BQ569K4 471 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 PDSS1Q5T2R2 415 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 HBMQ6B0K9 141 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 CLEC6AQ6EIG7 209 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 ANKRD26P1Q6NSI1 321 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 PPP4R4Q6NUP7 873 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 ADAM5Q6NVV9 412 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 FIGNL1Q6PIW4 674 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 ZAR1Q86SH2 424 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 HOMEZQ8IX15 550 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 LILRA2Q8N149 483 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 POC1BQ8TC44 478 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 PPCDCQ96CD2 204 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 MTERF3Q96E29 417 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 C16orf58Q96GQ5 468 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 RNF145Q96MT1 663 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 MS4A4EQ96PG1 132 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 ACTR6Q9GZN1 396 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 GP6Q9HCN6 339 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 FBXO34Q9NWN3 711 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 SH3BP4Q9P0V3 963 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 BAIAP2L1Q9UHR4 511 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 PTGDR2Q9Y5Y4 395 aa9.46□□□□□ -0.9
RFFL-209ENST00000581265 SCDO00767 359 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 AZIN1O14977 448 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 AKAP10O43572 662 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 EFNA2O43921 213 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 F12P00748 615 aaPredicted RBP9.45□□□□□ -0.9
RFFL-209ENST00000581265 TUBBP07437 444 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 ALOX5P09917 674 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 ADH6P28332 368 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 AGTR1P30556 359 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 ATP5J2P56134 94 aa9.45□□□□□ -0.9
RFFL-209ENST00000581265 MLC1Q15049 377 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms