RNA–Protein interactions for RNA: ENST00000580013.5

TSEN54-207, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 4

Gene TSEN54, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-207ENST00000580013 C8orf82Q6P1X6 216 aaPredicted RBP19.66■□□□□ 0.74
TSEN54-207ENST00000580013 NET1Q7Z628 596 aaPredicted RBP19.66■□□□□ 0.74
TSEN54-207ENST00000580013 PTOV1Q86YD1 416 aa19.66■□□□□ 0.74
TSEN54-207ENST00000580013 SPPL2CQ8IUH8 684 aa19.66■□□□□ 0.74
TSEN54-207ENST00000580013 METTL25Q8N6Q8 603 aa19.66■□□□□ 0.74
TSEN54-207ENST00000580013 GATSQ8NAP1 163 aa19.66■□□□□ 0.74
TSEN54-207ENST00000580013 PCYOX1LQ8NBM8 494 aa19.66■□□□□ 0.74
TSEN54-207ENST00000580013 NEIL3Q8TAT5 605 aa19.66■□□□□ 0.74
TSEN54-207ENST00000580013 RCN3Q96D15 328 aa19.66■□□□□ 0.74
TSEN54-207ENST00000580013 TMEM19Q96HH6 336 aa19.66■□□□□ 0.74
TSEN54-207ENST00000580013 TREX2Q9BQ50 279 aaPredicted RBP19.66■□□□□ 0.74
TSEN54-207ENST00000580013 SLC39A3Q9BRY0 314 aa19.66■□□□□ 0.74
TSEN54-207ENST00000580013 RSPO3Q9BXY4 272 aaPredicted RBP19.66■□□□□ 0.74
TSEN54-207ENST00000580013 SLC6A15Q9H2J7 730 aa19.66■□□□□ 0.74
TSEN54-207ENST00000580013 ICAM5Q9UMF0 924 aa19.66■□□□□ 0.74
TSEN54-207ENST00000580013 FASNP49327 2511 aaKnown RBP19.66■□□□□ 0.74
TSEN54-207ENST00000580013 DNAJC13O75165 2243 aa19.66■□□□□ 0.74
TSEN54-207ENST00000580013 TRGV5A0A0B4J1U4 118 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 A0A0G2JPF8 293 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 HNRNPCL2B2RXH8 293 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 HNRNPCL3B7ZW38 293 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 HNRNPCL1O60812 293 aaKnown RBP19.65■□□□□ 0.74
TSEN54-207ENST00000580013 DNAJA2O60884 412 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 TRAPPC6AO75865 159 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 STSP08842 583 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 HNRNPCL4P0DMR1 293 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 MTPNP58546 118 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 B3GALT5-AS1P59052 145 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 PLAURQ03405 335 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 FGFBP1Q14512 234 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 TMEM44Q2T9K0 475 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 NHSL2Q5HYW2 709 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 GCNT6Q5T4J0 391 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 GKAP1Q5VSY0 366 aaPredicted RBP19.65■□□□□ 0.74
TSEN54-207ENST00000580013 ARHGAP11AQ6P4F7 1023 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 CBLN3Q6UW01 205 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 YRDCQ86U90 279 aaKnown RBP19.65■□□□□ 0.74
TSEN54-207ENST00000580013 CALHM3Q86XJ0 350 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 OR8J3Q8NGG0 315 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 ZNF524Q96C55 264 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 CMTM5Q96DZ9 223 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 C1GALT1C1Q96EU7 318 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 LRRC37BQ96QE4 947 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 THUMPD3Q9BV44 507 aaKnown RBP19.65■□□□□ 0.74
TSEN54-207ENST00000580013 QRSL1Q9H0R6 528 aaKnown RBP19.65■□□□□ 0.74
TSEN54-207ENST00000580013 GID8Q9NWU2 228 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 CALML5Q9NZT1 146 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 SPRR3Q9UBC9 169 aa19.65■□□□□ 0.74
TSEN54-207ENST00000580013 FREM3P0C091 2139 aa19.64■□□□□ 0.74
TSEN54-207ENST00000580013 GTF3C1Q12789 2109 aa19.64■□□□□ 0.74
TSEN54-207ENST00000580013 CDC40O60508 579 aaKnown RBP eCLIP19.64■□□□□ 0.73
TSEN54-207ENST00000580013 EIF4E2O60573 245 aaKnown RBP19.64■□□□□ 0.73
TSEN54-207ENST00000580013 BCAS1O75363 584 aaPredicted RBP19.64■□□□□ 0.73
TSEN54-207ENST00000580013 BCHEP06276 602 aa19.64■□□□□ 0.73
TSEN54-207ENST00000580013 SLC6A2P23975 617 aa19.64■□□□□ 0.73
TSEN54-207ENST00000580013 DPP4P27487 766 aa19.64■□□□□ 0.73
TSEN54-207ENST00000580013 PGM1P36871 562 aa19.64■□□□□ 0.73
TSEN54-207ENST00000580013 CRISP3P54108 245 aa19.64■□□□□ 0.73
TSEN54-207ENST00000580013 GLYR1Q49A26 553 aaPredicted RBP19.64■□□□□ 0.73
TSEN54-207ENST00000580013 EMC4Q5J8M3 183 aa19.64■□□□□ 0.73
TSEN54-207ENST00000580013 WIPI1Q5MNZ9 446 aaPredicted RBP19.64■□□□□ 0.73
TSEN54-207ENST00000580013 HACD2Q6Y1H2 254 aa19.64■□□□□ 0.73
TSEN54-207ENST00000580013 FAM71CQ8NEG0 241 aa19.64■□□□□ 0.73
TSEN54-207ENST00000580013 OR4K17Q8NGC6 315 aa19.64■□□□□ 0.73
TSEN54-207ENST00000580013 PHOSPHO1Q8TCT1 267 aa19.64■□□□□ 0.73
TSEN54-207ENST00000580013 LAT2Q9GZY6 243 aa19.64■□□□□ 0.73
TSEN54-207ENST00000580013 EFCAB1Q9HAE3 211 aa19.64■□□□□ 0.73
TSEN54-207ENST00000580013 L3MBTL1Q9Y468 752 aa19.64■□□□□ 0.73
TSEN54-207ENST00000580013 OR14I1A6ND48 311 aa19.63■□□□□ 0.73
TSEN54-207ENST00000580013 DCTN3O75935 186 aa19.63■□□□□ 0.73
TSEN54-207ENST00000580013 PGM3O95394 542 aa19.63■□□□□ 0.73
TSEN54-207ENST00000580013 PTGS2P35354 604 aa19.63■□□□□ 0.73
TSEN54-207ENST00000580013 RNF144AP50876 292 aaPredicted RBP19.63■□□□□ 0.73
TSEN54-207ENST00000580013 GFRA1P56159 465 aa19.63■□□□□ 0.73
TSEN54-207ENST00000580013 KCNJ10P78508 379 aa19.63■□□□□ 0.73
TSEN54-207ENST00000580013 ZNF117Q03924 483 aa19.63■□□□□ 0.73
TSEN54-207ENST00000580013 GNA13Q14344 377 aa19.63■□□□□ 0.73
TSEN54-207ENST00000580013 GANABQ14697 944 aaKnown RBP19.63■□□□□ 0.73
TSEN54-207ENST00000580013 ZNF630Q2M218 657 aaPredicted RBP19.63■□□□□ 0.73
TSEN54-207ENST00000580013 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.63■□□□□ 0.73
TSEN54-207ENST00000580013 RABL3Q5HYI8 236 aa19.63■□□□□ 0.73
TSEN54-207ENST00000580013 VASNQ6EMK4 673 aa19.63■□□□□ 0.73
TSEN54-207ENST00000580013 HMGN2P46Q86SG4 172 aa19.63■□□□□ 0.73
TSEN54-207ENST00000580013 SERPINA11Q86U17 422 aa19.63■□□□□ 0.73
TSEN54-207ENST00000580013 FITM2Q8N6M3 262 aa19.63■□□□□ 0.73
TSEN54-207ENST00000580013 CCDC197Q8NCU1 140 aa19.63■□□□□ 0.73
TSEN54-207ENST00000580013 B4GALNT2Q8NHY0 566 aa19.63■□□□□ 0.73
TSEN54-207ENST00000580013 FAM57AQ8TBR7 257 aa19.63■□□□□ 0.73
TSEN54-207ENST00000580013 LDAHQ9H6V9 325 aa19.63■□□□□ 0.73
TSEN54-207ENST00000580013 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.63■□□□□ 0.73
TSEN54-207ENST00000580013 ARL8BQ9NVJ2 186 aa19.63■□□□□ 0.73
TSEN54-207ENST00000580013 TAS2R10Q9NYW0 307 aa19.63■□□□□ 0.73
TSEN54-207ENST00000580013 OSGIN2Q9Y236 505 aa19.63■□□□□ 0.73
TSEN54-207ENST00000580013 CARD8Q9Y2G2 431 aa19.63■□□□□ 0.73
TSEN54-207ENST00000580013 SLC6A5Q9Y345 797 aa19.63■□□□□ 0.73
TSEN54-207ENST00000580013 CHST2Q9Y4C5 530 aa19.63■□□□□ 0.73
TSEN54-207ENST00000580013 CLEC18AA5D8T8 446 aa19.62■□□□□ 0.73
TSEN54-207ENST00000580013 CLDN24A6NM45 220 aa19.62■□□□□ 0.73
TSEN54-207ENST00000580013 H3BNH8 94 aa19.62■□□□□ 0.73
TSEN54-207ENST00000580013 AIM2O14862 343 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms