RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 TRIM46Q7Z4K8 759 aa12.7□□□□□ -0.38
SMARCD2-205ENST00000577686 COX18Q8N8Q8 333 aa12.7□□□□□ -0.38
SMARCD2-205ENST00000577686 ZNF527Q8NB42 609 aa12.7□□□□□ -0.38
SMARCD2-205ENST00000577686 NUP43Q8NFH3 380 aa12.7□□□□□ -0.38
SMARCD2-205ENST00000577686 B4GALNT2Q8NHY0 566 aa12.7□□□□□ -0.38
SMARCD2-205ENST00000577686 IGFBPL1Q8WX77 278 aa12.7□□□□□ -0.38
SMARCD2-205ENST00000577686 HSD17B8Q92506 261 aa12.7□□□□□ -0.38
SMARCD2-205ENST00000577686 PPCDCQ96CD2 204 aa12.7□□□□□ -0.38
SMARCD2-205ENST00000577686 KCNA7Q96RP8 456 aa12.7□□□□□ -0.38
SMARCD2-205ENST00000577686 MDFIQ99750 246 aa12.7□□□□□ -0.38
SMARCD2-205ENST00000577686 GSTO2Q9H4Y5 243 aa12.7□□□□□ -0.38
SMARCD2-205ENST00000577686 ALG2Q9H553 416 aa12.7□□□□□ -0.38
SMARCD2-205ENST00000577686 C12orf49Q9H741 205 aa12.7□□□□□ -0.38
SMARCD2-205ENST00000577686 MED17Q9NVC6 651 aa12.7□□□□□ -0.38
SMARCD2-205ENST00000577686 PSMC3IPQ9P2W1 217 aaPredicted RBP12.7□□□□□ -0.38
SMARCD2-205ENST00000577686 A0A1W2PQD3 144 aa12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 GXYLT2A0PJZ3 443 aa12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 SHISA8B8ZZ34 492 aa12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 TLX2O43763 284 aaPredicted RBP12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 SOX30O94993 753 aa12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 KRT16P08779 473 aa12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 CTAGE8P0CG41 777 aa12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 UROSP10746 265 aa12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 MANFP55145 182 aaKnown RBP12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 P2RY6Q15077 328 aa12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 CTU2Q2VPK5 515 aaKnown RBP12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 PLPPR5Q32ZL2 321 aa12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 UBAP2Q5T6F2 1119 aaKnown RBP12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 PODNL1Q6PEZ8 512 aa12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 MTERF4Q7Z6M4 381 aaKnown RBP12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 CTAGE4Q8IX94 777 aa12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 CEP112Q8N8E3 955 aa12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 PIK3R3Q92569 461 aa12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 OSTF1Q92882 214 aa12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 KISS1RQ969F8 398 aaPredicted RBP12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 CHMP6Q96FZ7 201 aa12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 ADGRG7Q96K78 797 aa12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 HS6ST2Q96MM7 605 aa12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 CCT7Q99832 543 aa12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 POTEKPQ9BYX7 375 aa12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 RTN4RQ9BZR6 473 aa12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 C1orf109Q9NX04 203 aa12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 MID2Q9UJV3 735 aa12.69□□□□□ -0.38
SMARCD2-205ENST00000577686 ARID1AO14497 2285 aa12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 NUDT14O95848 222 aa12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 ADH6P28332 368 aa12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 RPL3P39023 403 aaKnown RBP12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 ASMTP46597 345 aa12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 SUMO3P55854 103 aaPredicted RBP12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 POU6F2P78424 691 aaPredicted RBP12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 ZNF239Q16600 458 aaKnown RBP12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 CCDC153Q494R4 210 aa12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 ZYG11AQ6WRX3 759 aa12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 FRMD7Q6ZUT3 714 aa12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 ZNF551Q7Z340 670 aaPredicted RBP12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 R3HCC1LQ7Z5L2 792 aaKnown RBP12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 TDRPQ86YL5 185 aa12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 LILRA2Q8N149 483 aa12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 SLC43A2Q8N370 569 aa12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 BANPQ8N9N5 519 aa12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 CCDC63Q8NA47 563 aa12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 GATSQ8NAP1 163 aa12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 RNF128Q8TEB7 428 aa12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 SMAP2Q8WU79 429 aaPredicted RBP12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 JADE3Q92613 823 aa12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 S100PBPQ96BU1 408 aa12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 SH3YL1Q96HL8 342 aaPredicted RBP12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 REG4Q9BYZ8 158 aa12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 HOXD1Q9GZZ0 328 aa12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 REEP4Q9H6H4 257 aa12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 TMEM185BQ9H7F4 350 aa12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 ACSS1Q9NUB1 689 aaPredicted RBP12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 SH3BP4Q9P0V3 963 aa12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 KLHL13Q9P2N7 655 aa12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 TMED5Q9Y3A6 229 aa12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 JMJD1CQ15652 2540 aa12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 FBN3Q75N90 2809 aa12.68□□□□□ -0.38
SMARCD2-205ENST00000577686 A0A0J9YW62 118 aa12.67□□□□□ -0.38
SMARCD2-205ENST00000577686 RNF223E7ERA6 249 aa12.67□□□□□ -0.38
SMARCD2-205ENST00000577686 TBX19O60806 448 aa12.67□□□□□ -0.38
SMARCD2-205ENST00000577686 PRKD3O94806 890 aa12.67□□□□□ -0.38
SMARCD2-205ENST00000577686 KCNK2O95069 426 aa12.67□□□□□ -0.38
SMARCD2-205ENST00000577686 PLAUP00749 431 aa12.67□□□□□ -0.38
SMARCD2-205ENST00000577686 IGKV1D-16P01601 117 aa12.67□□□□□ -0.38
SMARCD2-205ENST00000577686 PRPH2P23942 346 aa12.67□□□□□ -0.38
SMARCD2-205ENST00000577686 SLC7A1P30825 629 aa12.67□□□□□ -0.38
SMARCD2-205ENST00000577686 SFTPDP35247 375 aa12.67□□□□□ -0.38
SMARCD2-205ENST00000577686 HPCAL1P37235 193 aa12.67□□□□□ -0.38
SMARCD2-205ENST00000577686 NRF1Q16656 503 aa12.67□□□□□ -0.38
SMARCD2-205ENST00000577686 NCMAPQ5T1S8 102 aa12.67□□□□□ -0.38
SMARCD2-205ENST00000577686 SFRP5Q5T4F7 317 aa12.67□□□□□ -0.38
SMARCD2-205ENST00000577686 FIGNL1Q6PIW4 674 aa12.67□□□□□ -0.38
SMARCD2-205ENST00000577686 APOOLQ6UXV4 268 aa12.67□□□□□ -0.38
SMARCD2-205ENST00000577686 C22orf34Q6ZV56 151 aa12.67□□□□□ -0.38
SMARCD2-205ENST00000577686 OR4C3Q8NH37 302 aa12.67□□□□□ -0.38
SMARCD2-205ENST00000577686 HOXB13Q92826 284 aaPredicted RBP12.67□□□□□ -0.38
SMARCD2-205ENST00000577686 MTERF3Q96E29 417 aa12.67□□□□□ -0.38
SMARCD2-205ENST00000577686 FBXO34Q9NWN3 711 aa12.67□□□□□ -0.38
SMARCD2-205ENST00000577686 NTMQ9P121 344 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms